prot_F-serratus_M_contig1425.3046.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1425.3046.1
Unique Nameprot_F-serratus_M_contig1425.3046.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length117
Homology
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Match: D7FVA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVA2_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 8.020e-55
Identity = 84/109 (77.06%), Postives = 93/109 (85.32%), Query Frame = 0
Query:    8 FQTPRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLFYSAQE 116
            FQTPRVNGAVL QFLG TVC+VGKV+S QEG  +A+LETSDG +ITV + AGSTWTSQYVEVIGHLHE   LQEFKSTDFGD FD+  YD AV+LMTGKFSYLFY+ QE
Sbjct:    4 FQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDMFDLRKYDEAVSLMTGKFSYLFYNPQE 112          
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Match: A0A7S2UTE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTE4_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.050e-27
Identity = 45/104 (43.27%), Postives = 76/104 (73.08%), Query Frame = 0
Query:   10 TPRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLFYS 113
            TPR+NG++ + F+G+ VCLVGKV+  QE +  A +++SDG  + V +A GS++ + +VE++G +  D +++EFKS D+G++FD+ LY++ + L  GK+  LFYS
Sbjct:   11 TPRINGSLRQNFVGRPVCLVGKVLDVQENSGSAVIQSSDGSSVQVVMAPGSSYLTSFVEIVGEVLPDLSIKEFKSIDYGENFDLDLYNQVLQLANGKYQKLFYS 114          
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Match: A0A024UW39_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UW39_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 4.990e-22
Identity = 50/101 (49.50%), Postives = 66/101 (65.35%), Query Frame = 0
Query:   11 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 111
            PRVN A+L QF+G TV LVG + S       A L+TSD   +TV    G+ ++S+YVEVIG +  D +L+EFK T FGD FD+  YD+ V L+ GK+S LF
Sbjct:    8 PRVNKAILAQFVGHTVSLVGSIESWT--GSQAVLKTSDNGFVTVHPQPGADYSSKYVEVIGSVQPDGSLKEFKCTSFGDDFDLKNYDKLVQLIHGKYSTLF 106          
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Match: A0A485KWY3_9STRA (Aste57867_12966 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWY3_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.030e-21
Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   11 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 111
            PRVN AV+ Q++G+TV LVG + S       A ++TSDG  +TV    G+ +TS++VEVIG +  D +LQE+K T FGD FD+  YD+ V L+ GKF+ +F
Sbjct:    8 PRVNKAVMAQYIGRTVALVGSLESWTGSM--AVIKTSDGALVTVHPQPGADYTSKFVEVIGLVKPDGSLQEYKCTSFGDDFDLKNYDKLVHLIHGKFATMF 106          
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Match: A0A067CY70_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CY70_SAPPC)

HSP 1 Score: 90.5 bits (223), Expect = 2.850e-21
Identity = 46/101 (45.54%), Postives = 69/101 (68.32%), Query Frame = 0
Query:   11 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 111
            PRVN A++  ++ +TV LVG + S    +  A ++ SDG  +TV  A G+ ++S+++EVIG +  D +LQEFK T FGD+FD+G YD+ V LM GKF+ +F
Sbjct:    8 PRVNKALMASYVNRTVALVGSMESWTGNS--AIIKASDGGLVTVIPAPGADYSSKFIEVIGLVQPDGSLQEFKCTSFGDNFDLGNYDKLVTLMHGKFAPMF 106          
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Match: A0A6G0XXL0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXL0_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.730e-21
Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   11 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 111
            PRVN A++ QF+G+TV LVG + S       A ++TSDG  +TV    G+ ++S++VEVIG +  D +L+E+K T FGD FD+  YD+ V L+ GKFS LF
Sbjct:    8 PRVNKAIMAQFVGRTVALVGSLESWTGSM--AVVKTSDGGLVTVHPQPGADYSSKFVEVIGLVQPDGSLKEYKCTSFGDDFDLKNYDKLVHLIHGKFSSLF 106          
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Match: A0A1W0ABE2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABE2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.150e-20
Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 0
Query:   11 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 111
            PRVN A +  ++ +TV LVG + S      +A +++SDG  +TV  + G+ ++S+YVEVIG +  D ++QEFK T FGD FDM  YD+ V L+ GKF+ +F
Sbjct:    8 PRVNKATMVNYINRTVALVGSMESWT--GSNAVIKSSDGGLVTVHPSPGADYSSKYVEVIGQVQHDGSIQEFKCTSFGDDFDMANYDKLVMLIHGKFAPMF 106          
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Match: A0A1V9ZKF2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKF2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.640e-20
Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   11 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 111
            PRVN A++  ++ +TV LVG + S    +  A ++ SDG  +T+  + G+ ++S++VEVIG +  D +LQEFK T +GD FD+  YD+ VALM GKF+ +F
Sbjct:    8 PRVNKALMAGYINRTVALVGSMESWTGNS--AVVKASDGGLVTIHPSPGADYSSKFVEVIGQVQPDGSLQEFKCTSYGDDFDLANYDKLVALMHGKFAPMF 106          
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Match: A0A8K1C3J4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3J4_PYTOL)

HSP 1 Score: 86.3 bits (212), Expect = 1.470e-19
Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 0
Query:   11 PRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 111
            PRVN   +  F+G+TV +VG V S    A    L TSDG  + V    GS ++S++VEVIG + +++TLQEFK+T FGD+FD+  YD+ V +   KF +LF
Sbjct:   12 PRVNKKTMGSFVGRTVAIVGAVESHMPTA--VVLRTSDGGMVNVNPMPGSDYSSKFVEVIGRVVDNNTLQEFKTTLFGDNFDLETYDQFVQVAQSKFRHLF 110          
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Match: A0A484EA13_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA13_BRELC)

HSP 1 Score: 84.0 bits (206), Expect = 1.160e-18
Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 0
Query:   10 TPRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAE-LETSDGVRITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAVALMTGKFSYLF 111
            +PRVN   +  ++G TV +VG V   ++ +P A  L TSDG  + VT   GS + S+ VEVIG + +  TLQEFK+T FGD+FD+ +YD+ V L   K+ YLF
Sbjct:   10 SPRVNKTTMGGYVGHTVAVVGTV---EKHSPTAVVLRTSDGGIVNVTPQPGSDYGSKVVEVIGRVVDSETLQEFKTTLFGDNFDLDVYDQFVQLSHSKYKYLF 109          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1425.3046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVA2_ECTSI8.020e-5577.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UTE4_9STRA1.050e-2743.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A024UW39_9STRA4.990e-2249.50Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A485KWY3_9STRA1.030e-2147.52Aste57867_12966 protein n=1 Tax=Aphanomyces stella... [more]
A0A067CY70_SAPPC2.850e-2145.54Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A6G0XXL0_9STRA5.730e-2147.52Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1W0ABE2_9STRA1.150e-2044.55Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1V9ZKF2_9STRA4.640e-2043.56Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A8K1C3J4_PYTOL1.470e-1945.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484EA13_BRELC1.160e-1845.63Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013970Replication factor A protein 3PFAMPF08661Rep_fac-A_3coord: 9..104
e-value: 3.7E-18
score: 65.8
NoneNo IPR availableGENE3D2.40.50.140coord: 8..115
e-value: 8.6E-29
score: 101.7
NoneNo IPR availablePANTHERPTHR15114FAMILY NOT NAMEDcoord: 9..113
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 10..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1425contigF-serratus_M_contig1425:230337..248130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1425.3046.1mRNA_F-serratus_M_contig1425.3046.1Fucus serratus malemRNAF-serratus_M_contig1425 230076..248862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1425.3046.1 ID=prot_F-serratus_M_contig1425.3046.1|Name=mRNA_F-serratus_M_contig1425.3046.1|organism=Fucus serratus male|type=polypeptide|length=117bp
MGDHQPLFQTPRVNGAVLEQFLGQTVCLVGKVISQQEGAPDAELETSDGV
RITVTLAAGSTWTSQYVEVIGHLHEDSTLQEFKSTDFGDSFDMGLYDRAV
ALMTGKFSYLFYSAQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013970Rfa2
IPR012340NA-bd_OB-fold