prot_F-serratus_M_contig1414.2998.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1414.2998.1
Unique Nameprot_F-serratus_M_contig1414.2998.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length294
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1414.2998.1 vs. uniprot
Match: D7FWV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV5_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.450e-10
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:  251 FDPASLNGLVWPERLKEVRVGRISRVVTDGRRLHPWRGWDAEE 293
            FDP+SLNGLVWPE LK +++GR+SR V D RR+HPW  WD  E
Sbjct:  366 FDPSSLNGLVWPEGLKAIQLGRVSRAVNDDRRIHPWGAWDEPE 408
[Close]
BLAST of mRNA_F-serratus_M_contig1414.2998.1 vs. uniprot
Match: A0A6H5KHB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB9_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.030e-10
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:  251 FDPASLNGLVWPERLKEVRVGRISRVVTDGRRLHPWRGWDAEE 293
            FDP+SLNGLVWPE LK +++GR+SR V D RR+HPW  WD  E
Sbjct:  623 FDPSSLNGLVWPEGLKAIQLGRVSRAVNDDRRIHPWGAWDEPE 665
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1414.2998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWV5_ECTSI1.450e-1065.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHB9_9PHAE2.030e-1065.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 5..275
e-value: 1.1E-7
score: 32.6
IPR008615FNIPPFAMPF05725FNIPcoord: 116..158
e-value: 1.5E-8
score: 34.7
coord: 72..112
e-value: 5.4E-8
score: 32.9
coord: 6..33
e-value: 4.9E-6
score: 26.6
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 93..270
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 2..119
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 2..119
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 93..270
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 16..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1414contigF-serratus_M_contig1414:232373..237563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1414.2998.1mRNA_F-serratus_M_contig1414.2998.1Fucus serratus malemRNAF-serratus_M_contig1414 232373..238283 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1414.2998.1 ID=prot_F-serratus_M_contig1414.2998.1|Name=mRNA_F-serratus_M_contig1414.2998.1|organism=Fucus serratus male|type=polypeptide|length=294bp
MFGSLFNQPVEGVEWPPGLEKLIFGRVFNQQIQGTVWASGLRQLALGDFF
DQALNDVAWPPSLEQLSLGNKFNQAVKGVTFPSRLQHLAFGWRFDQPISD
VVWPTNLKQLTFDGGFNQPVDGVVWPSELKQLTLGRNFNQPIRGVSFPIG
LERLDLGDSFNQPIAGVVWPDTLEQLTFGQAFDQEIEGDGSVRWPLQLKR
LAFGGSFNQCVDSVGWPPLLEELTFGREFSQPVDRVTWPSGLKKLGFGHR
FDPASLNGLVWPERLKEVRVGRISRVVTDGRRLHPWRGWDAEE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP