prot_F-serratus_M_contig1410.2968.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1410.2968.1
Unique Nameprot_F-serratus_M_contig1410.2968.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length534
Homology
BLAST of mRNA_F-serratus_M_contig1410.2968.1 vs. uniprot
Match: D7FK81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK81_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 1.140e-115
Identity = 201/448 (44.87%), Postives = 284/448 (63.39%), Query Frame = 0
Query:   80 PTRGAYHSMIPAMRRHEDLQGIYEAMHDMDKEGRAPNDPAFAVAFWAARRLGDPDFAKLLLEMRSKAEYPPRQDFFVQVMLTLRDADRHEELLAYWRQLVCVNGLGDLEIAPETFILALRSAARTRAWDEIEVILKMMQARDISSGEVYAALLAGQRSLST--PGEVEQIAKLFEELESRTGVAPRRPLQLRLAVLWARTKVYDKAMLLFERAILDRSKIPQETRDLLVRTLVHLERYAEAKETWVSTPDKDKAKLRGLVFQTLMRAAQKLGDADWAMELHECCLTVGKKTQSWFHPIPIKMLAEAGRLPEAVKIVKTLRDRQHPKLPLDTYNLLCRRCREEGNAELAVEIVQEMRRGT-SRYVPYPDLLDFVIEAFVRQGRAREMVDIFEQLCAQNRQPDPESYVLMADAAVKCKDMSRTQKYVAEAEKRGLAASPEALAYAEGSKP 524
            PT+ AY SMI  +R  ED QGI   +++M +E   P +  FAV F  AR+LGD +FAK+LLE RS+A  PPRQDFFV VM+TL +A + E+ L YWR+LVCV G+  L I PETF LALR+A + +AWDE+E I+ MMQ       E    +L G+R   +  P  VE++ K+ +++E+ +G       QL+LAV+ +   ++ +AM LFE A  +     +  +  L+ TLV L ++  A+  W      +K +  G  FQ  M+AA+ L DADWA+ELHE  L   +K   WFHPI +++LAEAGRL EA +I +TLR   HPKLP  +Y++LCR C++ G   L V++VQ MR+GT S Y+P PD+L FV+EAF+ +G   E++ +FE++ AQ  QP+PE YVL+ADAA    D+ +T  +   AEK G  AS  ALA+ + + P
Sbjct:    3 PTKVAYQSMISGLRIGEDWQGILTTINEMLEEEVVPTEAGFAVGFMTARKLGDVEFAKMLLERRSQAGMPPRQDFFVNVMVTLGEAGKPEDFLEYWRRLVCVQGIDGLGIRPETFYLALRTAVKIKAWDEVEAIIGMMQEDGRPMDEKVHNVLMGRRQAVSKDPAHVERLLKVLQQMEAYSGRGLTPMCQLQLAVVCSDAGMHARAMPLFESAQREGVLFGKFHKPPLLSTLVALGKFKRARTEWRQATWANKKEFTGSTFQVFMKAAEGLKDADWALELHEQSLEGKQKHGRWFHPIALQVLAEAGRLEEAFRIAETLRTSGHPKLPPTSYHVLCRCCKQHGEKALVVKVVQTMRKGTMSLYLPPPDVLGFVVEAFIEKGIPGEVLTLFERMRAQRIQPNPEVYVLLADAAAAANDLPQTVHFAEMAEKGGRKASAGALAFTQNNAP 450          
BLAST of mRNA_F-serratus_M_contig1410.2968.1 vs. uniprot
Match: D7FK78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK78_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 2.400e-75
Identity = 147/397 (37.03%), Postives = 232/397 (58.44%), Query Frame = 0
Query:    5 REDGLQPDVHIYNFVIYGFAFNKDEGRAVQAYEKMLEEGVAPDNRTLSNLIIAYSWGDLNEMRRVLKEMRENNWWPTRGAYHSMIPAMRRHEDLQGIYEAMHDMDKEGRAPNDPAFAVAFWAARRLGDPDFAKLLLEMRSKAEYPPRQDFFVQVMLTLRDADRHEELLAYWRQLVCVNGLGDLEIAPETFILALRSAARTRAWDEIEVILKMMQARDISSGEVYAALLAGQRSLSTPGEVEQIAKLFEELESRTGVAPRRPLQLRLAVLWARTKVYDKAMLLFERAILDRSKIPQETRDLLVRTLVHLERYAEAKETWV-STPDKDKAKLRGLVFQTLMRAAQKLGDADWAMELHECCLT---VGKKTQSWFHPIPIKMLAEAGRLPEAVKIVKTLR 397
             +D L+P+   Y+ +IYG++  + EG AV+  E+M  +G+ P+ +TLS++I+A+SWG + +MRRV  EMRE  W PT+ A  +MI A+RR ED +GI +    M + G+   +    VA  AA   G+  FA+ LL    K ++ P++  +V VM+ LR+A +HEE LA WR+LV ++GLGD+++  +T+ LAL SA +   WDE+E IL MMQA+ + S       +    S    G+  ++ ++F E+  R    P R + L  A+ +AR + + KAM  F+ A+ + +K+     +LLV +L  +ERY E KE W  +T  KD +  R  V  T+  AA++L DADWA+ELH    +    G      +  + + +L +AGRL EA  +++  R
Sbjct:   95 EDDELEPEALTYSHLIYGYSQGRKEGEAVRLLEEMTVKGLQPERKTLSSMIVAHSWGSVEDMRRVSSEMREKGWTPTQRANSAMIGALRRAEDWEGILDTTRAMLENGQTMTEAGLVVAIKAAANAGNAGFARELLLTHGKNKHRPQEQLYVCVMVALRNACQHEECLACWRELVLLDGLGDVKLNGKTYNLALTSAVKMERWDEMEAILDMMQAKAVESTVATWRSMVDVWSAEETGDEGRLDRIFGEIHRRQW-RPDRAVGLHAAMAYARCRAWVKAMAWFDPALAEDNKLGPNETELLVMSLAGVERYGEVKEVWTRNTGSKDASVFRPAVLLTMAEAARELDDADWALELHSVASSRRGAGVAAPRLWQDV-VGVLTKAGRLEEAADVLQQTR 489          
BLAST of mRNA_F-serratus_M_contig1410.2968.1 vs. uniprot
Match: D7FK79_ECTSI (Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK79_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 1.890e-66
Identity = 151/475 (31.79%), Postives = 252/475 (53.05%), Query Frame = 0
Query:   39 MLEEGVAPDNRTLSNLIIAYSWGDLNEMRRVLKEMRENNWWPTRGAYHSMIPAMRRHEDLQGIYEAMHDMDKEGRAPNDPAFAVAFWAARRLGDPDFAKLLLEMRSKAEYPPRQDFFVQVMLTLRDADRHEELLAYWRQLVCVNGLGDLEIAPETFILALRSAARTRAWDEIEVILKMMQA-RDISSGEVYAALLAGQRSLS---TPGEVEQIAKLFEELESRTGVAPRRPLQLRLAVLWARTKVYDKAMLLFERAILDRSKIPQETRDLLVRTLVHLERYAEAKETWVSTPDKDKAKLRGLVFQTLMRAAQKLGDADWAMELHECCLTVGKKTQSWFHPIP----IKMLAEAGRLPEAVKIVKTLRDRQHPKLPLDTYNLLCRRCREEGNAELAVEIVQEMRRGTSRYVPYPDLLDFVIEAFVRQGRAREMVDIFEQLCAQNRQPDPESYVLMADAAVKCKDMSRTQKYVAEAE 505
            M+ +G+ PD  TLS+L +A +WG  N+M R L EM E  W PTR A+ S I  M + +D +G+ + +  M ++   P + AFA+A  +A RLG  D AK+L E RS++   P+Q+ +  +ML    AD HEE LAYWRQLVC++G+G + I  ET   ALRSA  +  WDE++ I+ M++  R+ +    Y   +A  RS S    P   +++ +  E L  + G+AP   +  R+AV++A+ K + KA  +FE+ +    ++     + ++++   LERY + ++TW  +  KD  +      +  M  A +L DA+WA E+    +   +  +    P      +K+LAE GR  EA +I++  R  +  ++    +N L   C++ G  ++ +E  + +R   +     P    FV+ A    GRA E   + E+  A + +P+   Y  +A AA +  D   + K++  AE
Sbjct:    1 MVSKGLEPDVLTLSHLAMAQAWGSSNDMYRTLAEMDERGWTPTRAAHLSAIAFMWQRKDTEGVLQMIERMLEKSYQPTEAAFAMALMSAGRLGRADLAKVLFEWRSESGLEPKQEIYSSMMLAHSKADLHEESLAYWRQLVCLDGVGGVAIDLETCRSALRSAIVSDHWDEVDTIVGMLRGKREATPDHTYKLAIAACRSRSGIDRPDYWQRVERTVEALR-KAGMAPSSEVVCRVAVVYAQGKQWKKAAAMFEQTLAQGVEMWAFRWECMMQSFFFLERYDDVRKTWRRSKTKDGGQHTVRANELAMTTAHRLLDAEWAKEI--MAVPENRNPKKGLKPATLLTAVKILAETGRPREARQILQEWRPTKTTRINHKNFNELLLCCQQHGGTDVGLEFYRILRGHDALSRLQPATFAFVVGALCEHGRAGEAAGVLEEQIAVDYRPEKACYRAVASAASQSGDSEASAKFLEAAE 472          
BLAST of mRNA_F-serratus_M_contig1410.2968.1 vs. uniprot
Match: A0A6H5KCB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCB7_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 6.420e-63
Identity = 121/318 (38.05%), Postives = 194/318 (61.01%), Query Frame = 0
Query:    5 REDGLQPDVHIYNFVIYGFAFNKDEGRAVQAYEKMLEEGVAPDNRTLSNLIIAYSWGDLNEMRRVLKEMRENNWWPTRGAYHSMIPAMRRHEDLQGIYEAMHDMDKEGRAPNDPAFAVAFWAARRLGDPDFAKLLLEMRSKAEYPPRQDFFVQVMLTLRDADRHEELLAYWRQLVCVNGLGDLEIAPETFILALRSAARTRAWDEIEVILKMMQARDISSGEVYAALLAGQRSLSTPGEVEQIAKLFEELESRTGVAPRRPLQLRLAVLWARTKVYDKAMLLFERAILDRSKIPQETRDLLVRTLVHLERYAEAKETW 322
             +DGL+P+   Y+ +I+G++  + EG AV+  E+M  +G+ P+ +TLS++I+A+SWG + +MRRV KEM+E  W PTR A  +MI A+ R ED +GI +    M + G+   +    VA  AA  +G+  FA+ LL +  K ++ P++  +V VM+ LR+A +HEE LA WR+LV ++GLGD+++   T+ LAL SA +T  WDE+E IL MMQ + +         +    +    G+  ++ ++F E+  R    P R ++L +A+ +AR + + KAM  F+ A+ + SK+     +LLV +L  LERY E KE W
Sbjct:  174 EDDGLEPEALTYSHLIHGYSQVRKEGEAVRLLEEMAVKGLQPERKTLSSMIVAHSWGSIEDMRRVSKEMQEKGWTPTRRANSAMIGALWRAEDWEGILDTTRAMLEAGQTMTEAGLVVAIKAATNVGNAGFARELLLIHGKNKHRPQEQLYVLVMVALRNASQHEECLACWRELVLLDGLGDVKLDGRTYNLALMSAVKTERWDEMETILDMMQVQAVEPTVATWRSIVDVWNAEETGDEGRLDQIFGEMVRREW-RPDRAVRLHVAMAYARCRAWVKAMAWFDPALTEDSKLGPSETELLVMSLAGLERYGEVKEVW 490          
BLAST of mRNA_F-serratus_M_contig1410.2968.1 vs. uniprot
Match: D7FK82_ECTSI (Pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK82_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 8.530e-12
Identity = 31/66 (46.97%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    3 QLREDGLQPDVHIYNFVIYGFAFNKDEGRAVQAYEKMLEEGVAPDNRTLSNLIIAYSWGDLNEMRR 68
            Q+++DG++PDV  YN +IYG+A +KD   A + YE++L  G+  +  TLSN+++A SW D++EMRR
Sbjct:  179 QMKQDGIKPDVETYNLIIYGYASSKDVAGARRTYEELLSSGLEANETTLSNMVVANSWKDIDEMRR 244          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1410.2968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FK81_ECTSI1.140e-11544.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK78_ECTSI2.400e-7537.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK79_ECTSI1.890e-6631.79Pentatricopeptide repeat-containing protein, putat... [more]
A0A6H5KCB7_9PHAE6.420e-6338.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK82_ECTSI8.530e-1246.97Pentatricopeptide (PPR) repeat-containing protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 11..57
e-value: 3.6E-7
score: 30.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 405..435
score: 7.333
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 12..46
score: 9.854
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 81..115
score: 7.048
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 442..476
score: 7.081
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 47..80
score: 6.533
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 477..511
score: 6.796
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 369..403
score: 5.196
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 190..224
score: 6.237
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 402..532
e-value: 2.6E-12
score: 48.9
coord: 235..401
e-value: 1.1E-6
score: 30.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..177
e-value: 2.6E-23
score: 84.8
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 191..400
coord: 406..516
coord: 8..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1410contigF-serratus_M_contig1410:75751..86712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1410.2968.1mRNA_F-serratus_M_contig1410.2968.1Fucus serratus malemRNAF-serratus_M_contig1410 75002..88940 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1410.2968.1 ID=prot_F-serratus_M_contig1410.2968.1|Name=mRNA_F-serratus_M_contig1410.2968.1|organism=Fucus serratus male|type=polypeptide|length=534bp
MAQLREDGLQPDVHIYNFVIYGFAFNKDEGRAVQAYEKMLEEGVAPDNRT
LSNLIIAYSWGDLNEMRRVLKEMRENNWWPTRGAYHSMIPAMRRHEDLQG
IYEAMHDMDKEGRAPNDPAFAVAFWAARRLGDPDFAKLLLEMRSKAEYPP
RQDFFVQVMLTLRDADRHEELLAYWRQLVCVNGLGDLEIAPETFILALRS
AARTRAWDEIEVILKMMQARDISSGEVYAALLAGQRSLSTPGEVEQIAKL
FEELESRTGVAPRRPLQLRLAVLWARTKVYDKAMLLFERAILDRSKIPQE
TRDLLVRTLVHLERYAEAKETWVSTPDKDKAKLRGLVFQTLMRAAQKLGD
ADWAMELHECCLTVGKKTQSWFHPIPIKMLAEAGRLPEAVKIVKTLRDRQ
HPKLPLDTYNLLCRRCREEGNAELAVEIVQEMRRGTSRYVPYPDLLDFVI
EAFVRQGRAREMVDIFEQLCAQNRQPDPESYVLMADAAVKCKDMSRTQKY
VAEAEKRGLAASPEALAYAEGSKPEGRAAAVEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf