prot_F-serratus_M_contig1409.2947.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1409.2947.1
Unique Nameprot_F-serratus_M_contig1409.2947.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length433
Homology
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BLAST of mRNA_F-serratus_M_contig1409.2947.1 vs. uniprot
Match: D7FQS9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS9_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 3.010e-36
Identity = 98/163 (60.12%), Postives = 104/163 (63.80%), Query Frame = 0 
Query:   24 RRSQSPVRRA--SPGPTRRVPSPLENAQFRPVAMNYAASPTNSQSCKYFNQHYKEEEDEPVGAPGGFCSAVRTVGYSTVGGKSFMSGKCPHCKRMVKSDNQVCTPNATPPPSPWKV---KLQSPXXXXXXXXKIP--GGHATLXXXXXXX----FKGSFFGKD 175
            R   SP R    SP   RRVPSPL NAQFRP+AM YA  P  S SCKYFN     ++DE V     FC+ VRTVGYSTVGGK FMSGKCPHC R VKSDNQVCTPNATPP SPWK     LQSP          P  GG +  XXXXXXX    FKGSFFG +
Sbjct:   65 REGSSPSRAGGRSPRSQRRVPSPLRNAQFRPLAMEYAEVPQPS-SCKYFNG---ADDDEEV-TQSEFCAHVRTVGYSTVGGKPFMSGKCPHCHRYVKSDNQVCTPNATPPQSPWKKTLNNLQSPLRSPLRTGSSPKDGGGSXXXXXXXXXXXXXFKGSFFGSN 222
[Close]
BLAST of mRNA_F-serratus_M_contig1409.2947.1 vs. uniprot
Match: A0A6H5JIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIY6_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 4.250e-34
Identity = 95/168 (56.55%), Postives = 104/168 (61.90%), Query Frame = 0 
Query:   24 RRSQSPVRRA--SPGPTRRVPSPLENAQFRPVAMNYAASPTNSQSCKYFNQHYKEEEDEPVGAPGGFCSAVRTVGYSTVGGKSFMSGKCPHCKRMVKSDNQVCTPNATPPPSPWKV---KLQSPXXXXXXXXKIPGGHA------TLXXXXXXXFKGSFFGKDANTGK 180
            R   SP R    SP   RRVPSPL NA+FRP+AM YA  P  + SCKYFN     ++DE V     FC+ VRTVGYSTVGGK FMSGKCPHC R VKSDNQVCTPNATPP SPWK     LQSP          P   +        XXXXXXXFKGSFFG + +  K
Sbjct:   16 REGSSPSRAGDRSPRSQRRVPSPLRNAKFRPLAMEYAEVPQPT-SCKYFNG---VDDDEEV-TQSEFCAHVRTVGYSTVGGKPFMSGKCPHCHRYVKSDNQVCTPNATPPQSPWKKTLNNLQSPLRSPLRTGSSPKDGSGSXXXXXXXXXXXXXFKGSFFGSNEDDDK 178
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1409.2947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQS9_ECTSI3.010e-3660.12Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JIY6_9PHAE4.250e-3456.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 374..394

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1409contigF-serratus_M_contig1409:23146..26417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1409.2947.1mRNA_F-serratus_M_contig1409.2947.1Fucus serratus malemRNAF-serratus_M_contig1409 22571..27367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1409.2947.1 ID=prot_F-serratus_M_contig1409.2947.1|Name=mRNA_F-serratus_M_contig1409.2947.1|organism=Fucus serratus male|type=polypeptide|length=433bp
MAMEGVDMPRLIVRHRSHSPVRCRRSQSPVRRASPGPTRRVPSPLENAQF
RPVAMNYAASPTNSQSCKYFNQHYKEEEDEPVGAPGGFCSAVRTVGYSTV
GGKSFMSGKCPHCKRMVKSDNQVCTPNATPPPSPWKVKLQSPLRSPLRSP
KIPGGHATLQSPLRSPFKGSFFGKDANTGKDADSHTGKDADSHTGKDADS
HTGKDADSHTGKDAESNTGKDSSDNPTDIGIKPAKSPLEPSPVKNRPSAR
SSSTRSQHPSCASLSPRGRNPETNLSLRTPWRGRALTSRSTSPVRVASRS
LSPVRAAGPSTRGPRSPGPRSPMHSPWKGAGFFEGTDAVVTSECSSSSVS
MAKSRGAHSPGPRSPLRVEVNFESVEEEDERREAEERSKAAQATNQHSEN
GWKIKSPLRSPFKGGFLSRVKNHDVAAPAESE*
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