prot_F-serratus_M_contig1407.2929.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1407.2929.1
Unique Nameprot_F-serratus_M_contig1407.2929.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length201
Homology
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BLAST of mRNA_F-serratus_M_contig1407.2929.1 vs. uniprot
Match: A0A6H5KTC8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTC8_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 5.990e-33
Identity = 91/189 (48.15%), Postives = 119/189 (62.96%), Query Frame = 0 
Query:   16 EEARLLVQIREAHSKSLREAASKIKTNGFDRHLRSLKEKV-DIDLEALAVKVVERVVERSEEGFNKLCEHMAVNEKLLALERRRHR----PEAINVIGMASRSKTLSFLGADNNGPLPGGGLQPVEFVRETTMRLKEAEAAKLLALAEEAERQVDAEEATVAEIEAALEKKLAEVAETQQALAEAARCL 199
            EEARL+V++R+AHS +L+ +A K+ ++   + +R ++ K+ D D  ALA +VV +V+E+SEE F KLC+ + VNEK LALER R                 ++  LS L  +   PLPGG   P E VRE+TM LK AE A+LL LAEEAER  DAE A VA + A LE+ L  VA TQQALAEA   L
Sbjct:   12 EEARLMVRMRQAHSMALKRSADKLTSHVLLKRVRPIQGKLGDADPAALAAQVVAQVIEKSEESFEKLCQRIRVNEKFLALERAREEHXXXXXXXXXXXRRQQNNNLSDLIGETT-PLPGGR-DPTELVRESTMNLKRAERARLLVLAEEAERSADAEAAKVAAVAAELEEWLGRVAGTQQALAEACSSL 198
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1407.2929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTC8_9PHAE5.990e-3348.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..191
IPR007128Nuclear MIS12/MIND complex subunit PMF1/Nnf1PFAMPF03980Nnf1coord: 59..173
e-value: 4.1E-6
score: 27.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1407contigF-serratus_M_contig1407:36047..50223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1407.2929.1mRNA_F-serratus_M_contig1407.2929.1Fucus serratus malemRNAF-serratus_M_contig1407 35824..50357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1407.2929.1 ID=prot_F-serratus_M_contig1407.2929.1|Name=mRNA_F-serratus_M_contig1407.2929.1|organism=Fucus serratus male|type=polypeptide|length=201bp
MAEESGVAPTTNQQVEEARLLVQIREAHSKSLREAASKIKTNGFDRHLRS
LKEKVDIDLEALAVKVVERVVERSEEGFNKLCEHMAVNEKLLALERRRHR
PEAINVIGMASRSKTLSFLGADNNGPLPGGGLQPVEFVRETTMRLKEAEA
AKLLALAEEAERQVDAEEATVAEIEAALEKKLAEVAETQQALAEAARCLP
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007128PMF1/Nnf1