prot_F-serratus_M_contig140.2910.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig140.2910.1
Unique Nameprot_F-serratus_M_contig140.2910.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length200
Homology
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BLAST of mRNA_F-serratus_M_contig140.2910.1 vs. uniprot
Match: D8LH27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH27_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 5.920e-13
Identity = 43/163 (26.38%), Postives = 81/163 (49.69%), Query Frame = 0 
Query:   28 MILPWLDAIVHGRRDLALITGNSLHPDEEPDNLFELVECLQTSNGVEIDGFSCLFEPMPHVCVFHTQQDYEDFLMERDVSTARRENVLSHMAVKHHKAKIGGIDQQLQGSGIDILAAKAVIL-GYLHSHWQPWVKRDIQTILDERTIATVRDGPYIGIHVRRG 189
            ++  W+ A+V  +R+  ++   S         + + V C  ++ G    G  C++ P+PH+C+  +QQ++E F+  R  +     +  S       K+     +  L+  G+D+  A+  +  G L +H QPWVK+D+  +L+  T   +R GP+I +HV  G
Sbjct:    6 LLETWVYAVVARQREDVMVVDES--------GILDNVSCEASTKGNVKSGMDCIWAPIPHLCLSQSQQEWEMFMRTRGAAELGIRSATSLTFDSVQKSMRDNSEDWLRELGLDLFRARQFLSNGVLWNHVQPWVKKDMNKLLNP-TPDEIRRGPFIALHVADG 159
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BLAST of mRNA_F-serratus_M_contig140.2910.1 vs. uniprot
Match: D8LU01_ECTSI (GT23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU01_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 1.620e-7
Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0 
Query:  144 AKAVILGYLHSHWQPWVKRDIQTILDERTIATVRDGPYIGIHVRRGDK 191
            A  +++ +LHS+ QPW K DIQ ILDE  IA +R+G Y+G+H+RR DK
Sbjct:  134 ADQMLVDHLHSYLQPWFKADIQRILDEPDIAEMRNGKYVGMHIRRTDK 181
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig140.2910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH27_ECTSI5.920e-1326.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LU01_ECTSI1.620e-754.17GT23 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 14..200
e-value: 1.6E-8
score: 36.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig140contigF-serratus_M_contig140:506929..519517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig140.2910.1mRNA_F-serratus_M_contig140.2910.1Fucus serratus malemRNAF-serratus_M_contig140 506928..519517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig140.2910.1 ID=prot_F-serratus_M_contig140.2910.1|Name=mRNA_F-serratus_M_contig140.2910.1|organism=Fucus serratus male|type=polypeptide|length=200bp
EPGCSEATGPVDAYSWRGVGYGSNVNIMILPWLDAIVHGRRDLALITGNS
LHPDEEPDNLFELVECLQTSNGVEIDGFSCLFEPMPHVCVFHTQQDYEDF
LMERDVSTARRENVLSHMAVKHHKAKIGGIDQQLQGSGIDILAAKAVILG
YLHSHWQPWVKRDIQTILDERTIATVRDGPYIGIHVRRGDKLKREAKAHD
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