prot_F-serratus_M_contig14.2901.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig14.2901.1
Unique Nameprot_F-serratus_M_contig14.2901.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length993
Homology
BLAST of mRNA_F-serratus_M_contig14.2901.1 vs. uniprot
Match: A0A6H5JTK7_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK7_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 1.760e-110
Identity = 246/601 (40.93%), Postives = 311/601 (51.75%), Query Frame = 0
Query:  447 VTASKYDNRTADNSGCYETGCLPEYVLDGLLNDVPDSRWSCELALTSAISECYMTFDLQESFILDGLTVYFHKSNDLERDPNPFNISISANEETGYVYSFSGVNTLGTALGTGENFSFPARSSGRYVRFTPILADEQWCSINEVEIYVTSGTLGP---------------------------------------------TSAPATLA-----PGSTIAPT----------MASTPLGGLECANVTVSNTDGFDGLYVLGANDT----FTSTGTILATIESFEQSAVCPDDSASTDCLITKWTIAS-DVDAMI-TYVAYEDVEHPAEVTEVWLRVNCSSTTGCVNSPAGVEIVCVDGSTTGGSLSTPAPGALT-SDCEIVEIVGTSGEELDGTYYDDGSSSQGGVTQFKGYDV---DLTSNGNTLAANWTTGGCPSPSETETGTDGDCSWRKWRITPGDGIMDAYEYFTFDEADHPVDIASGILWYTEDTFAEPYVGTINITCAPADTPSLQTPSEAXXXXXXXXXXXXXXXXXXXXXXXXXXDVNDGGNQDSGDGDYIPVIIGSLVGAVAVLGLVGFVAYRKIKTRPPIPPPPPSYDDLV 977
            VTA+KYD R +D++GC   GC P+ + DG LNDVP+SRWSCE AL     ECY TFDL  S  L  LT+YF+K +D++R  NPF +S S +  T Y  SF  VNT+ TA+G GE+F+FP  SSGRYVRFT  LAD+QW SINE EIYV   T  P                                             TS    +        ++IAPT              P+GG  C NVTVSN    +G Y    N      + STG I ATI S    A C D +AS DC + +W IA  D D+ + TY  Y++  HP+ + EVWLR++   T GC +SPA + I+C DG+T  GS  TPAP ++T SDC ++E+ GTSG E DG YYDDGS     VTQ+ GYDV   +L SNG  + AN     C + S + TG D  CSWR+W I           YFT+DEADHPVDIA+G LWYT D    PY G + +TCAPA TP+L TP+ +                           V  GG +              + G VA+L ++G VAY+          PPPSYDD +
Sbjct:   35 VTATKYDTRASDSNGCGTDGCSPDLMNDGDLNDVPESRWSCETALAGTEFECYATFDLGSSQSLTKLTIYFYKCDDVDRATNPFIVSTSTDGTT-YTTSFEDVNTIPTAIGAGEDFAFPTGSSGRYVRFTGELADDQWLSINEAEIYVDVATPAPVVPEXXXXXXXXXXXPTVEVTXXXXXXXXXXXXXXXXXXXXXXXXTSGSRAIGITXXXXAASIAPTGVXXXXXXXXXXXXPIGGPACGNVTVSNAGDLNGDYASSLNGDGSVMYVSTGVIAATISSSAAPAQCADSTAS-DCNVNRWQIAPLDADSTLPTYWVYDEALHPSTINEVWLRLDNCGTGGCQSSPAELTILCGDGTTASGS-GTPAPASVTASDCGVIEVAGTSGAESDGFYYDDGSELGDDVTQYGGYDVVNGELMSNGRAVVANRVNSTCATTSSS-TGADA-CSWRQWWIEASSS--GTVSYFTYDEADHPVDIAAGALWYTSDGSIMPYDGAVAVTCAPATTPTL-TPATSPVPTTDDDGTATRMPVEGTHSPGTAAPVVPGG-EXXXXXXXXXXXXXXVAGGVALLAILGAVAYK-------FKDPPPSYDDAM 619          
BLAST of mRNA_F-serratus_M_contig14.2901.1 vs. uniprot
Match: D7G7P1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P1_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 1.630e-58
Identity = 130/263 (49.43%), Postives = 161/263 (61.22%), Query Frame = 0
Query:  633 VSNTDGFDGLYVLGAND----TFTSTGTILATIESFEQSAVCPDDSASTDCLITKWTIA-SDVDAMI-TYVAYEDVEHPAEVTEVWLRVNCSSTTGCVNSPAGVEIVCVDGSTTGGSLSTPAPGALT-SDCEIVEIVGTSGEELDGTYYDDGSSSQGGVTQFKGYDV---DLTSNGNTLAANWTTGGCPSPSETETGTDGDCSWRKWRITPGDGIMDAYEYFTFDEADHPVDIASGILWYTEDTFAEPYVGTINITCAPADTP 885
            VSN    +G Y    N     T+ STG I AT+ S +  A C D SAS DC + +W I  SD D+ + TYV Y++  HP+ + EVWLR++   T GC +SPA + IVC DG+T  GS  TPAP ++T SDCE +E+ GTSG E DG YYDDGS    GVTQ+ GYDV   +LTSNG  + AN     C + + T TG D  CSWR+W I P         YFT+DEA HPVDIA+G LWYT D    PY G + +TCAPA TP
Sbjct:    3 VSNAGDLNGDYASSLNGDGSVTYVSTGVIAATLASSDAPAQCADSSAS-DCTVNRWQITPSDADSTLPTYVVYDEALHPSTINEVWLRLDNCGTGGCQSSPAELTIVCGDGTTAAGS-GTPAPVSVTASDCEAIEVAGTSGAESDGFYYDDGSELGDGVTQYVGYDVVNGELTSNGRAVVANRVDSTCATTT-TSTGADA-CSWRQWWIEPSSS--GTVSYFTYDEAGHPVDIAAGTLWYTSDDTVVPYDGDVVVTCAPATTP 259          
BLAST of mRNA_F-serratus_M_contig14.2901.1 vs. uniprot
Match: D7FRB9_ECTSI (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB9_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 6.400e-38
Identity = 83/136 (61.03%), Postives = 94/136 (69.12%), Query Frame = 0
Query:  110 DGLLNDEPDSRWSCELALTSAISECYMTFDLQQSFILDGLTVYFHKSNELDRATNPFNISISADEETGYVYSFDGVNTPGTSLGTGENFSFPATSSGRYVRFTPILADEQWCSINEVEIYVSSETLVSTSAPTVAP 245
            DG LND PDSRWSCE AL     ECY TFDL  S  L  LT+YF+KSNE DR TNPF +S S D  T +  SF+ +NT  T LG GE+F+FP  SSGRYVRFT  LAD+QW S+NEVEIYV     V+T AP VAP
Sbjct:    3 DGNLNDVPDSRWSCETALEGTEFECYATFDLGSSQSLIKLTIYFYKSNEEDRVTNPFVVSTSTDGTT-FTTSFEDINTIPTPLGEGEDFAFPTGSSGRYVRFTGDLADDQWLSVNEVEIYVD----VATPAP-VAP 132          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig14.2901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JTK7_9PHAE1.760e-11040.93F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
D7G7P1_ECTSI1.630e-5849.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRB9_ECTSI6.400e-3861.03F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000421Coagulation factor 5/8 C-terminal domainPFAMPF00754F5_F8_type_Ccoord: 289..410
e-value: 6.5E-7
score: 29.5
coord: 106..226
e-value: 6.9E-7
score: 29.4
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 60..231
score: 10.195
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 298..415
score: 9.348
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 440..595
score: 8.584
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 70..234
e-value: 2.3E-13
score: 52.3
coord: 253..417
e-value: 2.4E-13
score: 52.2
coord: 437..596
e-value: 2.2E-12
score: 49.1
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 279..413
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 456..593
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 95..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 958..992
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..933
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 934..957
NoneNo IPR availableTMHMMTMhelixcoord: 934..956

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig14contigF-serratus_M_contig14:966317..1014312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig14.2901.1mRNA_F-serratus_M_contig14.2901.1Fucus serratus malemRNAF-serratus_M_contig14 966280..1016347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig14.2901.1 ID=prot_F-serratus_M_contig14.2901.1|Name=mRNA_F-serratus_M_contig14.2901.1|organism=Fucus serratus male|type=polypeptide|length=993bp
MAFILRRLGPTLPQEPPRFVSPTPICRSFDEERCCADMQGSGISRHDGIM
LLLLLLILGASSPAGGVEQVATDITNVTVTASKYDNRTNTLVDDFSGCYD
TGCLPEYVLDGLLNDEPDSRWSCELALTSAISECYMTFDLQQSFILDGLT
VYFHKSNELDRATNPFNISISADEETGYVYSFDGVNTPGTSLGTGENFSF
PATSSGRYVRFTPILADEQWCSINEVEIYVSSETLVSTSAPTVAPTPQVT
TVEEATDITNVTVTASKYDNRTNTLVDDYSGCYDTGCLPEYVLDGLLNDE
PDSRWSCELALTSAISECYMTFDLQQSFILDGLTVYFHKSNELDRATNPF
NISISADEETGYVYSFNGVNTPGTSLGTGENFSFPATSSGRYVRFTPILA
DEQWCSINEVEIYVTSGTIGSTSAPTVAPTPVVTTVEEATDITNVTVTAS
KYDNRTADNSGCYETGCLPEYVLDGLLNDVPDSRWSCELALTSAISECYM
TFDLQESFILDGLTVYFHKSNDLERDPNPFNISISANEETGYVYSFSGVN
TLGTALGTGENFSFPARSSGRYVRFTPILADEQWCSINEVEIYVTSGTLG
PTSAPATLAPGSTIAPTMASTPLGGLECANVTVSNTDGFDGLYVLGANDT
FTSTGTILATIESFEQSAVCPDDSASTDCLITKWTIASDVDAMITYVAYE
DVEHPAEVTEVWLRVNCSSTTGCVNSPAGVEIVCVDGSTTGGSLSTPAPG
ALTSDCEIVEIVGTSGEELDGTYYDDGSSSQGGVTQFKGYDVDLTSNGNT
LAANWTTGGCPSPSETETGTDGDCSWRKWRITPGDGIMDAYEYFTFDEAD
HPVDIASGILWYTEDTFAEPYVGTINITCAPADTPSLQTPSEAPTLAPTM
TASMASTSVPTVAPDDTPTDVNDGGNQDSGDGDYIPVIIGSLVGAVAVLG
LVGFVAYRKIKTRPPIPPPPPSYDDLVEGAGSVPKRTADTAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000421FA58C
IPR008979Galactose-bd-like_sf