prot_F-serratus_M_contig14.2897.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig14.2897.1
Unique Nameprot_F-serratus_M_contig14.2897.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length551
Homology
BLAST of mRNA_F-serratus_M_contig14.2897.1 vs. uniprot
Match: A0A6H5K704_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K704_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 2.210e-51
Identity = 184/538 (34.20%), Postives = 244/538 (45.35%), Query Frame = 0
Query:   21 ILVATGV--ASKETCTTVQVSGGNYTGDFEQGDGSSTYAKAGT---TYVIQAISFGDGARARRRLAEIDGVRSVGRWRGGGQRGLADDCESQMWILADTAAVDD-GYPYYAAFDCADHPAEVESTWVYIDCDDCAKVAPISIACVLGAEANLESDESDGDNDSGVDSFFTLPVIIGIAAAGLVVLFCVVFFVMCRKKKAPTGSQTFADESEHGASLK---GPRVMGTSAPPDASFSHVEGSHEGPSVG--------GETATSPAGLYPSAPQHQKNLSKSSDVADNAYGGIYASG------ISGGQASRHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAKAMGIELVPQEKQQHLPGVLRTGGYERRPLGDGSG--------------------------------------------------------VKWSAGQNLEPRGIYDDGVASQFSD-SAAGSVFSIHPPPDDMMQEHAYD---CDESVAASSPGAYSMYSHFTVGGGTYGGGM--SEFAASDVDDLAPLEQP 473
            +L++T +  A++ETCT+V V+GG+  G +E G+ SS+    GT   T+V+Q + F + +RARR L    G           +RGLA+DC +QMWILADT AV++ G+PYY+ FDCA HPA VESTW+Y+DCDDCA+VA IS+ C    E     D  DGD         T+P II IA  GL+V+ CV F V   KK+A  GS TFAD+S+H  + +   G    G +A  D             +V         GET  SP     +      +     D   N  GGI  SG      ++ G  ++                         XXXXXXXX A   A        E   +   VLR                                                                      + WSAGQN+  R  +D   +S+  D SAAGSV+ + PP +D+  EH+Y     D+SVAASSPGAYSMYSH+T GGGTY GG+  +  A SD D  +    P
Sbjct:   18 VLLSTAIYAAAQETCTSVTVTGGDLPGVYELGE-SSSEVYVGTDDSTHVLQPVVFAE-SRARRNLVGGTGDGXXXXXXXXXRRGLANDCATQMWILADTGAVEEEGFPYYSTFDCATHPASVESTWLYVDCDDCAEVATISVVCT-SPEVLTSDDGGDGD--------LTIPAIIAIAVGGLIVVLCVGFCVFHCKKRAHKGSHTFADDSQHSLAQQKRAGKAGAGGAAVADXXXXXXXXXXXXXAVPLPAYTGAIGETVESPMAAGGTMGD-SGDRGVGGDGPRNVRGGIGVSGGSSAGLLAKGSNAKSFKPNHGGVNTPAYEGIFAPRGGAGXXXXXXXXTATTSAALPHPAAVEMSNYAKPVLRKDSMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVWSAGQNMGHRRSFDQ--SSEIGDDSAAGSVYELQPPAEDL--EHSYHQDGYDDSVAASSPGAYSMYSHYTAGGGTYTGGVGANSEAWSDEDGASSYRPP 539          
BLAST of mRNA_F-serratus_M_contig14.2897.1 vs. uniprot
Match: D8LHN9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN9_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.170e-41
Identity = 94/209 (44.98%), Postives = 126/209 (60.29%), Query Frame = 0
Query:   21 ILVATGV--ASKETCTTVQVSGGNYTGDFEQGDGSSTYAKAGTTYVIQAISFGDGARARRRLAEIDGVRSVGRWRGGGQRGLADDCESQMWILADTAAVDD-GYPYYAAFDCADHPAEVESTWVYIDCDDCAKVAPISIACVLGAEANLESDESDGDNDSGVDSFFTLPVIIGIAAAGLVVLFCVVFFVMCRKKKAPTGSQTFADESEH 226
            +L++T +   ++ETCT+V V+GG++ GD+E G+G        +T V+Q + F + +RARR L                 RGLA+DC SQMWILADT AV++ G+PYY+ FDCA HPA VESTW+Y+DCDDCA                     S    DSG+    TLPVII I A GL++L C+ F V+ RKK+A  GS TFAD+S+H
Sbjct:   24 VLLSTAIYAVAQETCTSVTVTGGDFPGDYELGEGDVYVGTDDSTRVLQPVVFAE-SRARRSLVGXXXXXXXXXXXXXXXRGLANDCASQMWILADTGAVEEAGFPYYSTFDCATHPASVESTWLYVDCDDCAXXXXXXXXXXXXXXXXXXLLTSGDGGDSGL----TLPVIIAIVAGGLILLLCLGFCVVHRKKRAHKGSHTFADDSQH 227          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig14.2897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K704_9PHAE2.210e-5134.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHN9_ECTSI1.170e-4144.98Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..208
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..550
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..182
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.693
NoneNo IPR availableTMHMMTMhelixcoord: 185..207
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig14contigF-serratus_M_contig14:772832..805901 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig14.2897.1mRNA_F-serratus_M_contig14.2897.1Fucus serratus malemRNAF-serratus_M_contig14 772735..805920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig14.2897.1 ID=prot_F-serratus_M_contig14.2897.1|Name=mRNA_F-serratus_M_contig14.2897.1|organism=Fucus serratus male|type=polypeptide|length=551bp
MAGASIHGAMLAISATIIFHILVATGVASKETCTTVQVSGGNYTGDFEQG
DGSSTYAKAGTTYVIQAISFGDGARARRRLAEIDGVRSVGRWRGGGQRGL
ADDCESQMWILADTAAVDDGYPYYAAFDCADHPAEVESTWVYIDCDDCAK
VAPISIACVLGAEANLESDESDGDNDSGVDSFFTLPVIIGIAAAGLVVLF
CVVFFVMCRKKKAPTGSQTFADESEHGASLKGPRVMGTSAPPDASFSHVE
GSHEGPSVGGETATSPAGLYPSAPQHQKNLSKSSDVADNAYGGIYASGIS
GGQASRHDSRSASSRQPSRADSLVDSRKDSMAEAAAAAHAARAKAMGIEL
VPQEKQQHLPGVLRTGGYERRPLGDGSGVKWSAGQNLEPRGIYDDGVASQ
FSDSAAGSVFSIHPPPDDMMQEHAYDCDESVAASSPGAYSMYSHFTVGGG
TYGGGMSEFAASDVDDLAPLEQPRVMLVRRQDPRGQPPSYESPPVALDSP
DSRPPRSKHVIETNLSMSPAGLAARADQNSARRNRKAGKRADKLAEDATR
*
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