prot_F-serratus_M_contig1397.2853.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1397.2853.1
Unique Nameprot_F-serratus_M_contig1397.2853.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length362
Homology
BLAST of mRNA_F-serratus_M_contig1397.2853.1 vs. uniprot
Match: D7FII9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII9_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 6.830e-102
Identity = 159/226 (70.35%), Postives = 182/226 (80.53%), Query Frame = 0
Query:  114 EEADDAPELTKEFYEEVAARWNTTVEGAMEVEKDIQFDK--------ALYDELRTRRDFGFEQDLGLELEKRNITKKAEVTKIVDKGLEALPGVTSSTTFTPSSDLTPREVVNSVLEALKNNDNPYHNHGVEVFIRFLSPSSAMYGVEMEGVARYLGENRNRALMHWDAIAYPRPLTLSGGEKKNKAFQPLKLQDTMTGTWHSVSVYMTLDAKTNHWLIESIIMKG 331
            EE DD  ELTK FY E+AAR   T +G  +  ++   D+           DELR RRDFGFEQDLGLELEKRNITK+AE  KI+D GLE +PGVTSS TF PSS+LTPREVV SVLEALKNND PYHNHGVEVFIRFL+PSSAM+GVEM GVARYL ENRNRA MHW+ +A+PRPLT+SGG K+NKAFQP+KL+DTMTG WHSVSVY+TLDA++N WLIES I+KG
Sbjct:   86 EEEDDTLELTKGFYSEIAARLGKTAQGQPQDSQETAKDEDSGSXXXXXXXDELRARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSNCWLIESCIVKG 311          
BLAST of mRNA_F-serratus_M_contig1397.2853.1 vs. uniprot
Match: A0A7R9YD20_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD20_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.600e-12
Identity = 77/252 (30.56%), Postives = 119/252 (47.22%), Query Frame = 0
Query:  104 AAKAGWEEDTEEADDAP-ELTKEFYEEVAARWNTTVEGAMEVEKDIQFDKALYDELRTRRDFGFEQDLGL----ELEKRNIT----KKAEVTKIVDKGLEA----------LPGVTSSTTFTPSSDLTPREVVNSVLEALKNNDNPYHNHGVEVFIRFLSPSSAMYGVEMEGVARY---LGENRNRALMHWDAIAYPRPLTLSGGEKKNKAFQPLKLQDTMTGTWHSVSVYMTLDAKTNH----WLIESIIM 329
            AA AG  E     D A  + T+EF+E V  R      G +  EKDI      Y+ LR R  FG E++        +E +N+T       E+ K   + +E           LP +   T+  P   LTP  VV S+L+A++ ND+PY NHG+EV  RF S +S+    +     +Y   + ++    L+ WDAI + +PL  +G     KA Q ++L+   +  W  V+V   L  +T      WL++S ++
Sbjct:   36 AASAGPSEARNGTDSADSDFTREFFESVKEREG----GQLTEEKDI------YNALRERMGFGVEEEFARVRQQRIEGKNVTGDLDASEELLKATLRAMEQNIAENATAGQLPDIKLPTS--PDPALTPGLVVMSILQAMRCNDSPYENHGIEVLTRFTSSASSATDTDEPSFRKYCDFIPKSEYGILLKWDAIRF-KPLEKAG----KKALQKIQLRLADSNEW--VTVKFALSERTTFLGETWLLDSFLI 268          
BLAST of mRNA_F-serratus_M_contig1397.2853.1 vs. uniprot
Match: A0A7S0K9M8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9M8_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.030e-5
Identity = 41/130 (31.54%), Postives = 66/130 (50.77%), Query Frame = 0
Query:  207 PSSDLTPREVVNSVLEALKNNDNPYHNHGVEVFIRFLSPSSAMYGVEMEGVARYLGE------NRNRALMHWDAIAYPRPLTLSGGEKKNKAFQPLKLQDTMTGTWHSVSVYMTLDAKTNHWLIESIIMK 330
            P ++LT  EVV  VLEAL+NNDNP  N GVE+   + S +S +  +E        GE      ++   L H D +      +    + K +AF  ++L D M  T  SV+  ++  +  + WLI+S +++
Sbjct:  244 PDAELTAGEVVTVVLEALRNNDNPSTNRGVEILFAYSSSASILADLERAPSVEEYGEMLRTSPDQKILLEHVDVLFDKADYS----QDKKRAFITVRLMD-MEKTLTSVNFILSTGSSDDCWLIDSHLVR 368          
BLAST of mRNA_F-serratus_M_contig1397.2853.1 vs. uniprot
Match: A0A7S4ALD3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALD3_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 4.560e-5
Identity = 50/144 (34.72%), Postives = 66/144 (45.83%), Query Frame = 0
Query:  204 TFTPSSDLTPREVVNSVLEALKNNDNPYHNHGVEVFIRFLSPSSAMY---GVEMEGVARYLGENRNRALM-HWDAIAYPRPLTLSGGEKKNKAFQPLKLQDTMTGTWHSVSVYMTL-----DAKTNHWLIESIIMKGISEPSKR 338
            T  P +DLT  EVV  VL ALKNNDNPY N GVE+   + SP S +    G+       +L E   +AL  H +A       +  G     K F   +LQ T       +SV   L     D     WLI+SI+++  S   +R
Sbjct:  190 TTVPDADLTAGEVVLLVLTALKNNDNPYVNKGVEILFGYSSPGSQIKQEEGLTPAEYGEFLKETEYKALFEHLEATIEKGEYSFEG----KKGFFTARLQ-TGPAPSDCISVNFILSGSSPDDDDGAWLIDSILIRPRSVRRRR 328          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1397.2853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FII9_ECTSI6.830e-10270.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YD20_9STRA1.600e-1230.56Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0K9M8_9STRA4.030e-531.54Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S4ALD3_9STRA4.560e-534.72Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1397contigF-serratus_M_contig1397:241813..254425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1397.2853.1mRNA_F-serratus_M_contig1397.2853.1Fucus serratus malemRNAF-serratus_M_contig1397 241642..255353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1397.2853.1 ID=prot_F-serratus_M_contig1397.2853.1|Name=mRNA_F-serratus_M_contig1397.2853.1|organism=Fucus serratus male|type=polypeptide|length=362bp
MSTDMTRPCAACAIGIILASSVPCNEAFFVPTTRTCGVSIPRKGCARSAR
ATAGWRSVAGLEPVRHTGMVRPHSSTRSASDGEADNILGESSESEGQEGS
SSQAAKAGWEEDTEEADDAPELTKEFYEEVAARWNTTVEGAMEVEKDIQF
DKALYDELRTRRDFGFEQDLGLELEKRNITKKAEVTKIVDKGLEALPGVT
SSTTFTPSSDLTPREVVNSVLEALKNNDNPYHNHGVEVFIRFLSPSSAMY
GVEMEGVARYLGENRNRALMHWDAIAYPRPLTLSGGEKKNKAFQPLKLQD
TMTGTWHSVSVYMTLDAKTNHWLIESIIMKGISEPSKRVLSQTPANEFYK
ARQSKAPPWRE*
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