prot_F-serratus_M_contig1376.2744.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1376.2744.1
Unique Name	prot_F-serratus_M_contig1376.2744.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	631

Homology

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BLAST of mRNA_F-serratus_M_contig1376.2744.1 vs. uniprot
Match: D8LM12_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM12_ECTSI)

HSP 1 Score: 511 bits (1316), Expect = 6.200e-172
Identity = 334/641 (52.11%), Postives = 384/641 (59.91%), Query Frame = 0

Query:    1 MEDVWETGRRHVKISKQYLKALLLRGPNIFVALAWSQVFWLILESAAGNGDSRGYVRLPTVALYALALHAGGHLLLFHYH--RRRLNHHAMEFIVDLATDVVGFAWIALAEEMLAQVFLVTAGNAFMYAALALAASLGAMEIGSFVRRLLDWPPGFDGTANEFDAGCFALPTSWLVTQAVHIALYGFFYRTSVAGGQGGRGKRGEE---VDIRLAASLFLFVYAMFCSAVAARVIGGEVAATAVVDDRGGSMHDIDGDYGGAWAQGGGARDVERSDLVIRAVGAGAPFRAALASDLVVPSAP---GDRKRDQEPP----KREMYLEGLVEGTEGTDDTATQRAESGDTKVRPSLKGDEGDTSGAHGGGGAAHLDNPPQTPLETPATAFTDEARMMEVCRVRRESLQRGIKAYMRITVGMIVGWGYNMWAQLVFRQEELEFRFGPAVGATVYAALITALGVCAMVRGVDWIDKQRVDDAVPGSDITDDDG-----RLSMGYGEGTRRRED--EQKRRRIALRAFHAKRMLVVVGGVSLMVGWAWEEAFDLMLEALVGDSADAGAIAAKFALAAISTATVLWAELRSRHDGDDHHLGKGSAGRRPLGDRGGALLDEEVGGSGEEGADGEGLAVENNLLVPLIP 622
            M++V+  GRRH+KISK YLK LL RGPNIFVALAWSQ FWLILE+ AGN DSRGYVRL +VA YALALHAGGHLLL  Y   RR+L+HHA+EF++DL TDVVGFAWI +AEEMLAQVF V A    +YAALA AASLGAME+GS  R LLDWP GF+ TAN+FDAG FALPTSWLVTQ VHI LYGFFYRT  AGGQGGRG  GEE   VD+RLAASLFL  YA+ CSA+A RVIGG VAA                          G     RSDLVIRA+ +     AA ASD          GD +    P     +   Y EG   G +  D             V PS     GD  G  G    A               A  ++AR        R+SL+RG+KAYMR+TVGM+VGW YN+W Q+ FRQEELEFRFGPA+GA  YAAL TALGVC MVRG D +          G  + D  G     R   GY    R  ED  E +RR  A+R++HA+R+LVVVGGVSL+VGWAWEEAFDL LE L+GD ADA  + AK +LA  +T  VL  E+R              AGRR  G  GG L D    G+GE G           LL PL+P
Sbjct:    1 MDEVYAKGRRHLKISKLYLKGLLKRGPNIFVALAWSQAFWLILEATAGNEDSRGYVRLSSVACYALALHAGGHLLLHRYSSGRRKLSHHALEFLLDLVTDVVGFAWINVAEEMLAQVFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRT--AGGQGGRGGDGEEDDVVDVRLAASLFLLAYALLCSALATRVIGGTVAAXXXXXXX---XXXXXXXXXXLTRSNSGGSTGSRSDLVIRAISSYG-VTAAQASDAAXXXXXXXXGDVEASSTPSCGGGRNTSYREG---GGDVAD-------------VGPSNSTKVGDGGGERGAAPLAXXXXXXXXXXXXXXAAGGEDAR--------RDSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRKNGAGGAVNDSVGGALGSRPGGGYFHVERPEEDGEETRRRDAAVRSYHARRLLVVVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRR-------------AGRRDAG--GGDLHDHN--GAGEGGG---------GLLEPLVP 585

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1376.2744.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1376.2744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LM12_ECTSI	6.200e-172	52.11	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 399..421
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 43..61
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 525..543
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..42
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 91..117
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 165..187
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 123..144
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 544..562
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 207..227
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 188..206
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 62..79
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 118..122
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 563..630
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 228..398
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 453..504
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 505..524
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 433..452
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 80..90
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 422..432
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 145..164
None	No IPR available	TMHMM	TMhelix		coord: 504..523
None	No IPR available	TMHMM	TMhelix		coord: 399..420
None	No IPR available	TMHMM	TMhelix		coord: 207..229
None	No IPR available	TMHMM	TMhelix		coord: 90..107
None	No IPR available	TMHMM	TMhelix		coord: 122..144
None	No IPR available	TMHMM	TMhelix		coord: 165..187
None	No IPR available	TMHMM	TMhelix		coord: 430..452
None	No IPR available	TMHMM	TMhelix		coord: 21..43
None	No IPR available	TMHMM	TMhelix		coord: 543..562
None	No IPR available	TMHMM	TMhelix		coord: 58..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1376	contig	F-serratus_M_contig1376:229564..249394 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1376.2744.1	mRNA_F-serratus_M_contig1376.2744.1	Fucus serratus male	mRNA	F-serratus_M_contig1376 229226..250294 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1376.2744.1 ID=prot_F-serratus_M_contig1376.2744.1|Name=mRNA_F-serratus_M_contig1376.2744.1|organism=Fucus serratus male|type=polypeptide|length=631bp
MEDVWETGRRHVKISKQYLKALLLRGPNIFVALAWSQVFWLILESAAGNG
DSRGYVRLPTVALYALALHAGGHLLLFHYHRRRLNHHAMEFIVDLATDVV
GFAWIALAEEMLAQVFLVTAGNAFMYAALALAASLGAMEIGSFVRRLLDW
PPGFDGTANEFDAGCFALPTSWLVTQAVHIALYGFFYRTSVAGGQGGRGK
RGEEVDIRLAASLFLFVYAMFCSAVAARVIGGEVAATAVVDDRGGSMHDI
DGDYGGAWAQGGGARDVERSDLVIRAVGAGAPFRAALASDLVVPSAPGDR
KRDQEPPKREMYLEGLVEGTEGTDDTATQRAESGDTKVRPSLKGDEGDTS
GAHGGGGAAHLDNPPQTPLETPATAFTDEARMMEVCRVRRESLQRGIKAY
MRITVGMIVGWGYNMWAQLVFRQEELEFRFGPAVGATVYAALITALGVCA
MVRGVDWIDKQRVDDAVPGSDITDDDGRLSMGYGEGTRRREDEQKRRRIA
LRAFHAKRMLVVVGGVSLMVGWAWEEAFDLMLEALVGDSADAGAIAAKFA
LAAISTATVLWAELRSRHDGDDHHLGKGSAGRRPLGDRGGALLDEEVGGS
GEEGADGEGLAVENNLLVPLIPNTERDGIQ*