prot_F-serratus_M_contig1337.2503.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1337.2503.1
Unique Nameprot_F-serratus_M_contig1337.2503.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length202
Homology
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Match: A0A6H5L7K0_9PHAE (Ribosomal_L12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7K0_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 1.450e-65
Identity = 118/161 (73.29%), Postives = 134/161 (83.23%), Query Frame = 0
Query:   41 DDHPLASIPDDDGDPGPPPPLDPSIVTGPSPKVLKVMEDIDSLNFVEMAMLIDVFKDKLGLDEVPSLSFGGGDG-FGDEEGGDSAPEAAKEKSTFSVKVTGFGDKAKIKVIKEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL 200
            D++PL  + DDDGDPGPPPPLDPSIVT PSPKVL+VM  I+SLNFVEMAMLID+FK+KLGLDE+P+LSFGG DG        + AP AA EK+ F VKVTGFGDKAKIKVIKE+R ITGLGLREAKE+VESLPQVVKEDLK ++AE+MKA LE  GA  EL
Sbjct:  139 DENPLGGMVDDDGDPGPPPPLDPSIVTEPSPKVLEVMASIESLNFVEMAMLIDLFKNKLGLDELPTLSFGGADGGXXXXXXXEDAPAAAAEKTIFKVKVTGFGDKAKIKVIKEVRVITGLGLREAKEMVESLPQVVKEDLKEDEAEAMKAKLEAVGATVEL 299          
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Match: A0A7C1ATE0_9PROT (50S ribosomal protein L7/L12 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C1ATE0_9PROT)

HSP 1 Score: 100 bits (249), Expect = 2.040e-23
Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 0
Query:   70 SPKVLKVMEDIDSLNFVEMAMLIDVFKDKLGLDEVPSLSFGGGDGFGDEEGGDSAPEAAKEKSTFSVKVTGFGDKAKIKVIKEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL 200
            S K+ K+++ +  L  +E++ L+   +DK G+     + F  G G        +A EA +E+S FSV +T FG+K KI+VIKE+RA+T LGL+EAKELVES P  VKE L  EDAE++K  LE AGA AEL
Sbjct:   33 SSKLQKIIDTVSELTVLELSELVTALEDKFGVTAAAPMGFAVGPG-------QAAAEAEEEQSEFSVILTSFGEK-KIQVIKEVRAVTDLGLKEAKELVESAPVPVKEGLSKEDAEAVKVKLEAAGASAEL 155          
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Match: A0A7S3PWR8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWR8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.880e-23
Identity = 57/131 (43.51%), Postives = 85/131 (64.89%), Query Frame = 0
Query:   70 SPKVLKVMEDIDSLNFVEMAMLIDVFKDKLGLDEVPSLSFGGGDGFGDEEGGDSAPEAAKEKSTFSVKVTGFGDKAKIKVIKEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL 200
            SP + ++ ++I ++N +E+  L+D   D   L++     F GG G G  E      E  +EK+ F +K+TGF  K+KIKVIKE+RA++GLGL+EAKE+VE  P+ +K D+K E+AE +KA LE  GA  E+
Sbjct:  115 SPLLHELADEIVTMNMLEVKELVDRIGDHFDLEDGDDFEFSGGAGEGAAE-----EEVKEEKTAFDLKLTGFDAKSKIKVIKEVRAMSGLGLKEAKEMVEGAPKTIKSDIKMEEAEELKAKLEAVGATVEI 240          
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Match: A0A7S2SJD4_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJD4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 5.490e-23
Identity = 62/136 (45.59%), Postives = 89/136 (65.44%), Query Frame = 0
Query:   70 SPKVLKVMEDIDSLNFVEMAMLIDVFKDKLGL---DEVPSLSFGGGDGFGDEEGGDSAPEAAKE--KSTFSVKVTGFGDKAKIKVIKEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL 200
            SP+V ++ + +  L+FVE+ +L ++  DK+G+   D +   S GGG        G SA E  KE  K+ F +K+TG+  K+KIKVIKE+R+ITGLGLR+AK +VE  P VVK+D+K E+AE +K  LE  GA  E+
Sbjct:   93 SPRVKEIFQKVLQLDFVEIHLLGELVYDKMGMSISDAMRQASVGGG-----SAAGASAKEETKEEVKTAFDLKLTGWDAKSKIKVIKEVRSITGLGLRDAKAMVEGFPNVVKKDIKMEEAEELKKKLESIGATVEI 223          
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Match: A0A3M6VRL1_9STRA (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VRL1_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.890e-22
Identity = 62/135 (45.93%), Postives = 85/135 (62.96%), Query Frame = 0
Query:   70 SPKVLKVMEDIDSLNFVEMAMLIDVFKDKLGLDEVP-SLSFGGGDGFGDEEGGDSAP---EAAKEKSTFSVKVTGFGDKAKIKVIKEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL 200
            +PKV  V++ I  LN +E+A L    + K G+ E    +  GGG       GG++AP   E  +EK+ F VK+  F  K+KIKVIKE+RAITGLGL+EAKELVE  P  +K+D+K E+A+ +   L+  GAV EL
Sbjct:   50 TPKVQTVLDQILELNMIEIAELSHAIQTKFGIAESAFQVGMGGG------AGGNAAPAAEEPKEEKTAFDVKLASFDAKSKIKVIKEVRAITGLGLKEAKELVEGAPSTLKKDVKKEEADELIEKLKAVGAVVEL 178          
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Match: A0A8K1FI50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI50_PYTOL)

HSP 1 Score: 97.8 bits (242), Expect = 3.500e-22
Identity = 63/134 (47.01%), Postives = 86/134 (64.18%), Query Frame = 0
Query:   70 SPKVLKVMEDIDSLNFVEMAMLIDVFKDKLGLDEVPSLSFGGGDGFGDEEGGDSAP---EAAKEKSTFSVKVTGFGDKAKIKVIKEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL 200
            +PKV  V++ I  LN VE+  L    + K     +P  +F  G G     GG +AP   E  +EK+ F VK+  F  K+KIKVIKE+RAITGLGL+EAKELVE +P V+K+D+K E+AE++ A L+  GAV E+
Sbjct:   47 TPKVQNVLDQILELNMVEIFELSGAIQQKF---NIPDAAFAMGAG-----GGAAAPAAEEVKEEKTQFDVKLASFDAKSKIKVIKEVRAITGLGLKEAKELVEGVPSVLKKDVKKEEAEALIAQLKEVGAVLEM 172          
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Match: A0A432IKQ8_9FIRM (50S ribosomal protein L7/L12 n=2 Tax=Bacteria TaxID=2 RepID=A0A432IKQ8_9FIRM)

HSP 1 Score: 96.7 bits (239), Expect = 4.350e-22
Identity = 64/136 (47.06%), Postives = 82/136 (60.29%), Query Frame = 0
Query:   69 PSPKVLKVMEDIDSLNFVEMAMLIDVFKDKLGLDEVPSLSFG----GGDGFGDEEGGDSAPEAAKEKSTFSVKVTGFGDKAKIKVIKEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL 200
            PS KV  +ME I  LN +E+  L DV +D+ G+  V ++  G    G DG G         E A E++ F V +T  GDK KI VIK +R+ITGLGL+EAKE+VES P+ +KE    EDAE +K  LE AGA  EL
Sbjct:   14 PSEKVGSIMESIKVLNVMELVELKDVLEDEFGVSAVAAMPMGMPAAGADGAG-------GAEEAAEQTEFDVILTSIGDK-KIPVIKAVRSITGLGLKEAKEMVESAPKAIKEGASKEDAEKVKKELEDAGASVEL 141          
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Match: A0A5D6YIZ0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YIZ0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 5.870e-22
Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 0
Query:   70 SPKVLKVMEDIDSLNFVEMAMLIDVFKDKLGLDEVPSLSFGGGDGFGDEEGGDSAPEAAKEKSTFSVKVTGFGDKAKIKVIKEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL 200
            SPKV  V++ I  LN +E+  L    ++K     +P  +F G  G           E  +EK+ F VK+  F  K+KIKVIKE+RAITGLGL+EAKELVE  P V+K+D+K ++AE++ A L+  GAV EL
Sbjct:   52 SPKVQTVLDQILDLNMIEIVELSSAIQEKF---NIPESAFSGNFGGXXXXXXXXXXEVKEEKTQFDVKLASFDAKSKIKVIKEVRAITGLGLKEAKELVEGAPSVLKKDVKKDEAEALVAQLKEVGAVVEL 179          
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Match: A0A7S1EUI7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUI7_9RHOD)

HSP 1 Score: 97.8 bits (242), Expect = 1.270e-21
Identity = 63/136 (46.32%), Postives = 90/136 (66.18%), Query Frame = 0
Query:   70 SPKVLKVMEDIDSLNFVEMAMLIDVFKDKLGLDEVPSLSFGGGDGF--GDEEGGDSAPEAA---KEKSTFSVKVTGFGDKAKIKVIKEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL 200
            SPKV K++++I  LN +E+  L    KD+LGL ++PS+  GG         +  D AP AA   +EK++F+V++TGF    KI +IKEIR +TGLGL+EAK LV+S P VVKE+L  +DA +++  L  AGA +EL
Sbjct:   93 SPKVSKLLDEIVQLNMLEVKELSSGLKDRLGLADLPSMPMGGMMAMPAAPAQAAD-APAAAPKVEEKTSFTVRLTGFDAAKKIGIIKEIRTLTGLGLKEAKALVDSAPVVVKENLTKDDAAALQEKLTAAGATSEL 227          
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Match: A0A0P1AIP0_PLAHL (Ribosomal protein l7 l12 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIP0_PLAHL)

HSP 1 Score: 95.9 bits (237), Expect = 1.980e-21
Identity = 60/131 (45.80%), Postives = 80/131 (61.07%), Query Frame = 0
Query:   70 SPKVLKVMEDIDSLNFVEMAMLIDVFKDKLGLDEVPSLSFGGGDGFGDEEGGDSAPEAAKEKSTFSVKVTGFGDKAKIKVIKEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL 200
            +PKV  V+  I  LN +E+A L    + K G+ E       GG G G      +A E  +EK+ F VK+  F  K+KIKVIKE+RAITGLGL+EAKELVE  P  +K+D+K E+A+ +   L+  GAV EL
Sbjct:   46 TPKVQTVLNQILELNMIEIAELSHAIQAKFGISESAFQVGMGGGGTGAVS---AAQEVKEEKTAFDVKLASFDAKSKIKVIKEVRAITGLGLKEAKELVEGAPSTLKKDVKKEEADELIEKLKAVGAVVEL 173          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1337.2503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7K0_9PHAE1.450e-6573.29Ribosomal_L12 domain-containing protein n=2 Tax=Ec... [more]
A0A7C1ATE0_9PROT2.040e-2347.3350S ribosomal protein L7/L12 n=1 Tax=Proteobacteri... [more]
A0A7S3PWR8_9STRA2.880e-2343.51Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2SJD4_9STRA5.490e-2345.59Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]
A0A3M6VRL1_9STRA2.890e-2245.93Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
A0A8K1FI50_PYTOL3.500e-2247.01Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A432IKQ8_9FIRM4.350e-2247.0650S ribosomal protein L7/L12 n=2 Tax=Bacteria TaxI... [more]
A0A5D6YIZ0_9STRA5.870e-2245.04Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S1EUI7_9RHOD1.270e-2146.32Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A0P1AIP0_PLAHL1.980e-2145.80Ribosomal protein l7 l12 n=1 Tax=Plasmopara halste... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013823Ribosomal protein L7/L12, C-terminalPFAMPF00542Ribosomal_L12coord: 134..200
e-value: 1.5E-24
score: 86.1
IPR000206Ribosomal protein L7/L12TIGRFAMTIGR00855TIGR00855coord: 75..199
e-value: 3.8E-27
score: 93.2
IPR000206Ribosomal protein L7/L12HAMAPMF_00368Ribosomal_L7_L12coord: 70..201
score: 17.865
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 127..200
e-value: 7.7E-26
score: 91.8
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 130..200
NoneNo IPR availablePANTHERPTHR45987:SF439S RIBOSOMAL PROTEIN L12, MITOCHONDRIALcoord: 71..200
NoneNo IPR availablePANTHERPTHR45987FAMILY NOT NAMEDcoord: 71..200
NoneNo IPR availablePRODOMPD001326coord: 136..188
e-value: 4.0E-10
score: 154.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1337contigF-serratus_M_contig1337:160687..163511 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1337.2503.1mRNA_F-serratus_M_contig1337.2503.1Fucus serratus malemRNAF-serratus_M_contig1337 159701..163714 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1337.2503.1 ID=prot_F-serratus_M_contig1337.2503.1|Name=mRNA_F-serratus_M_contig1337.2503.1|organism=Fucus serratus male|type=polypeptide|length=202bp
MPDDGHATGEKTGGEAPTPSVEASSVGADVKQDETDGVQGDDHPLASIPD
DDGDPGPPPPLDPSIVTGPSPKVLKVMEDIDSLNFVEMAMLIDVFKDKLG
LDEVPSLSFGGGDGFGDEEGGDSAPEAAKEKSTFSVKVTGFGDKAKIKVI
KEIRAITGLGLREAKELVESLPQVVKEDLKPEDAESMKAALEGAGAVAEL
V*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013823Ribosomal_L7/L12_C
IPR000206Ribosomal_L7/12
IPR014719Ribosomal_L7/12_C/ClpS-like