prot_F-serratus_M_contig1336.2494.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1336.2494.1
Unique Name	prot_F-serratus_M_contig1336.2494.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	369

Homology

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BLAST of mRNA_F-serratus_M_contig1336.2494.1 vs. uniprot
Match: A0A699ZVL3_HAELA (Uncharacterized protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZVL3_HAELA)

HSP 1 Score: 85.9 bits (211), Expect = 1.410e-14
Identity = 71/261 (27.20%), Postives = 126/261 (48.28%), Query Frame = 0

Query:    2 SLKLPNQRASFTVHQVAASADPTLASALADATGESMVNVVTPQGEPRVERRVSIDSAKIRHHLRAKVE-------------DEDTAAA-------TATEQARRHTR-----------HITILLFSLAGPDSVYVDELWRARAVGGDMVVIAQSEQRRDHAPP-LVCGGRAVEEDPRNPLRQALAALGSAVGGLVPSQHSWHEARGGEVVADWRWSMSESPMSPVVSHAQFSQLDQDVIYRTHVVRALSASAELTRAGSTVL 230
            SLKL NQ  +F  H +  S+DP LA+A + A   S  ++   +   +   R+ +DS  + H LR + E             D +   A        A    +R TR           H+ + +F +    +V +DE + A+A+  DMV++ Q+  R D  P  ++CGG A+   P +PL++AL+A  + +GG++P    ++ A+   V  DW WS+     S      +F++L +D + R++++  L ++ +   AG  +L
Sbjct:  237 SLKLGNQHFTFKQHFLTLSSDPLLATAFSSALRVSHQHIPADEDALQETERLYLDSRALAHVLRQRFEVSSPGGEQELPPLDSEGQPAGGAWRRRIAARSKQRRTRVKGGAAGHAEHHVPVFVFEVHRDVAVLIDEHYNAKALE-DMVLVVQNAARDDEHPTGMMCGG-ALLARPLSPLKEALSATLTHLGGVLPPHLGYNPAKD-RVTHDWLWSVGAHVQSFTSVGTRFTELQRDALARSYLLDGLDSAVDAVNAGVLLL 494

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1336.2494.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1336.2494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A699ZVL3_HAELA	1.410e-14	27.20	Uncharacterized protein n=1 Tax=Haematococcus lacu...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31515	FAMILY NOT NAMED	coord: 2..254
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 334..353
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..333
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 354..368
None	No IPR available	TMHMM	TMhelix		coord: 334..353

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1336	contig	F-serratus_M_contig1336:79558..90807 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1336.2494.1	mRNA_F-serratus_M_contig1336.2494.1	Fucus serratus male	mRNA	F-serratus_M_contig1336 79108..90918 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1336.2494.1 ID=prot_F-serratus_M_contig1336.2494.1|Name=mRNA_F-serratus_M_contig1336.2494.1|organism=Fucus serratus male|type=polypeptide|length=369bp
MSLKLPNQRASFTVHQVAASADPTLASALADATGESMVNVVTPQGEPRVE
RRVSIDSAKIRHHLRAKVEDEDTAAATATEQARRHTRHITILLFSLAGPD
SVYVDELWRARAVGGDMVVIAQSEQRRDHAPPLVCGGRAVEEDPRNPLRQ
ALAALGSAVGGLVPSQHSWHEARGGEVVADWRWSMSESPMSPVVSHAQFS
QLDQDVIYRTHVVRALSASAELTRAGSTVLLNALSRETYRNLLEGPLSGS
LEKTRASLREVSDARADVIRKMDSMAFDLVVRKLNPLLDMSRRCYDDALR
LDLEVIVASRRLAGLDGTTAGTFGSAFPLLSSDLTRLLLGLLIVMSILAA
WLLRRASKSPALKRVKIN*