prot_F-serratus_M_contig1327.2427.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1327.2427.1
Unique Nameprot_F-serratus_M_contig1327.2427.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length109
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1327.2427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 45..103
e-value: 2.5E-9
score: 37.6
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 37..109
e-value: 1.7E-10
score: 42.9
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 45..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1327contigF-serratus_M_contig1327:97430..104934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1327.2427.1mRNA_F-serratus_M_contig1327.2427.1Fucus serratus malemRNAF-serratus_M_contig1327 97410..104934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1327.2427.1 ID=prot_F-serratus_M_contig1327.2427.1|Name=mRNA_F-serratus_M_contig1327.2427.1|organism=Fucus serratus male|type=polypeptide|length=109bp
MQTREHSSCSAVYVPSSRHPNHVGTEGAGGAATMIPAQGVRVAPFLPSLL
RMVNNGDMIFDDGKLIFDDPDSFVTTVLPRYFPRINFASFRRQLKNFGFQ
KALDQGNRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf