prot_F-serratus_M_contig132.2373.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig132.2373.1
Unique Nameprot_F-serratus_M_contig132.2373.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length233
Homology
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BLAST of mRNA_F-serratus_M_contig132.2373.1 vs. uniprot
Match: D8LEH3_ECTSI (VHS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH3_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 6.790e-77
Identity = 126/174 (72.41%), Postives = 147/174 (84.48%), Query Frame = 0 
Query:    1 MFRRSQHPASRLSNAEMKKLEQLFLMVDSCTVDMGRGGQDSTTATKLADAINGYPNATIVYEVMRRIRKCFKSSNPRVVARALDLTDVLMESCGPHARREVGSDKFLKLVCKLCKVTKTKMDPAWHTVAAQAQGHLAHWAETSEQTLGPGNRFTQAYENLRRDGVQFRSSSNLG 174
            MFRRS HPAS+L+N E+KKLEQLFLMVD+CT+DM RG QD  T+++LADAINGYPNAT+VYEVMRRIRKCFKSSN +VV RALDLTD LM+SCG HARREV SDKFLKL+ KLCKVTKT++DP+W TV+ +AQ  +  WAE SE+ +G G+RFTQ YENLRRDGV FR  S  G
Sbjct:    1 MFRRS-HPASKLTNTELKKLEQLFLMVDNCTLDMQRG-QD--TSSQLADAINGYPNATMVYEVMRRIRKCFKSSNTQVVLRALDLTDTLMQSCGSHARREVSSDKFLKLIGKLCKVTKTRLDPSWQTVSERAQDLVVGWAEASERMVGSGSRFTQLYENLRRDGVLFRGGSGSG 170
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BLAST of mRNA_F-serratus_M_contig132.2373.1 vs. uniprot
Match: A0A6H5JQS7_9PHAE (VHS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS7_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 2.050e-69
Identity = 122/171 (71.35%), Postives = 143/171 (83.63%), Query Frame = 0 
Query:    1 MFRRSQHPASRLSNAEMKKLEQLFLMVDSCTVDMGRGGQDSTTATKLADAINGYPNATIVYEVMRRIRKCFKSSNPRVVARALDLTDVLMESCGPHARREVGSDKFLKLVCKLCKVTKTKMDPAWHTVAAQAQGHLAHWAETSEQTLGPGNRFTQAYENLRRDGVQFRSSS 171
            MFRRS HPAS+L+N E+KKLEQLFLMVDSCT+DM RG     T+++LADAINGYPNAT+VYEVMRRIRKCFKSSN +VV RALDLTD LM+SCG HARREV SDKFLK++ KLCKVTKT++DP+W  V+ +AQ  +A WA  SE+ +G G+RFTQ YENLRRDGV FR  S
Sbjct:    1 MFRRS-HPASKLTNTELKKLEQLFLMVDSCTLDMQRG---QNTSSQLADAINGYPNATMVYEVMRRIRKCFKSSNTQVVLRALDLTDTLMQSCGSHARREVSSDKFLKVIGKLCKVTKTRLDPSWQMVSERAQELVAGWA--SERMVGSGSRFTQLYENLRRDGVPFRGGS 165
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig132.2373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEH3_ECTSI6.790e-7772.41VHS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQS7_9PHAE2.050e-6971.35VHS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002014VHS domainSMARTSM00288VHS_2coord: 23..164
e-value: 0.0029
score: 12.9
IPR002014VHS domainPFAMPF00790VHScoord: 40..143
e-value: 1.4E-10
score: 41.2
IPR002014VHS domainPROSITEPS50179VHScoord: 31..168
score: 17.066
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 12..177
e-value: 1.8E-20
score: 75.1
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 25..167
NoneNo IPR availablePANTHERPTHR45898FAMILY NOT NAMEDcoord: 22..168
NoneNo IPR availablePANTHERPTHR45898:SF2TARGET OF MYB PROTEIN 1coord: 22..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig132contigF-serratus_M_contig132:35080..55783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig132.2373.1mRNA_F-serratus_M_contig132.2373.1Fucus serratus malemRNAF-serratus_M_contig132 35080..55883 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig132.2373.1 ID=prot_F-serratus_M_contig132.2373.1|Name=mRNA_F-serratus_M_contig132.2373.1|organism=Fucus serratus male|type=polypeptide|length=233bp
MFRRSQHPASRLSNAEMKKLEQLFLMVDSCTVDMGRGGQDSTTATKLADA
INGYPNATIVYEVMRRIRKCFKSSNPRVVARALDLTDVLMESCGPHARRE
VGSDKFLKLVCKLCKVTKTKMDPAWHTVAAQAQGHLAHWAETSEQTLGPG
NRFTQAYENLRRDGVQFRSSSNLGPGARRSSEVRSGFGNGGGSSRGFGSG
GNSFRSSGGAGSSFKSSGGAGGGFGSSVGGGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002014VHS_dom
IPR008942ENTH_VHS