prot_F-serratus_M_contig131.2323.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig131.2323.1
Unique Nameprot_F-serratus_M_contig131.2323.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length186
Homology
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Match: D8LMD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD9_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 7.240e-85
Identity = 119/179 (66.48%), Postives = 149/179 (83.24%), Query Frame = 0
Query:    4 LDKSPVITKSISSGLIGMMGDVVAQTIEWGFGDSSAPWSDRHMIWRSCAVMIDGLIVNGPLLHYAYDILERCMPAGESVLGAVMQVCVGIDVFVIDPVFAFLFVWSTGLVEGLSVEHDILHTLRCNFLSMVMWLVVIGLCWAPLQIYLFNRYPVQFRVLVADFIDLVWTCVTSFFSHVQ 182
            LD  PV+TKSISSG IG++GDV+AQ +E+ FG +  PW    M+WRSCAVMIDGL++NGPLLHYAY++LE  MPAG+S+L A+ QVCV  DV VIDPVFAF+FVWSTGL+EG SV  +IL T+  ++ ++V+WL+VIG+ WAP+QIYLFNRYPVQ+RVL AD IDLVWTCV+S FSHV+
Sbjct:   10 LDAYPVLTKSISSGFIGLLGDVLAQWVEYLFGAAFPPWKTTAMVWRSCAVMIDGLLINGPLLHYAYEMLESRMPAGDSILAAMTQVCV--DVLVIDPVFAFMFVWSTGLIEGRSVRGEILPTIVHHYPTLVLWLIVIGVGWAPIQIYLFNRYPVQYRVLTADLIDLVWTCVSSLFSHVK 186          
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Match: D8LMD8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD8_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 2.530e-49
Identity = 83/178 (46.63%), Postives = 123/178 (69.10%), Query Frame = 0
Query:    2 DSLDKSPVITKSISSGLIGMMGDVVAQTIEWGF--GDSSAPWSDRHMIWRSCAVMIDGLIVNGPLLHYAYDILERCMPAGESVLGAVMQVCVGIDVFVIDPVFAFLFVWSTGLVEGLSVEHDILHTLRCNFLSMVMWLVVIGLCWAPLQIYLFNRYPVQFRVLVADFIDLVWTCVTSF 177
            + L+K P+I K  +S L+G +GDV++Q + W    G ++A W D + + +S AV IDG  V+ PLLH AY  L+R +PA ES   A+ QV V  DV V+DP+F  LF+ +TGL+EG S   +I+ T+  +++++V WLVVIGL  APLQ+Y FNR+PV++RVL++D +D++WT V  F
Sbjct:   87 EELEKRPLIWKCATSALVGALGDVISQGVYWAIRGGRANAVWHDTNAVRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESKAYALAQVLV--DVLVLDPIFGLLFMVTTGLLEGRSFSQEIIRTIEDDYVTLVFWLVVIGLALAPLQVYTFNRFPVKWRVLISDGMDVLWTFVACF 262          
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Match: A0A6H5JK43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK43_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.360e-25
Identity = 67/180 (37.22%), Postives = 97/180 (53.89%), Query Frame = 0
Query:    4 LDKSPVITKSISSGLIGMMGDVVAQTIEWGF-GDSSAPWSDRHMIWRSCAVMIDGLIVNGPLLHYAYDILERCMP--AGESVLGAVMQVCVGIDVFVIDPVFAFLFVWSTGLVEGLSVEHDILHTLRCNFLSMVMWLVVIGLCWAPLQIYLFNRYPVQFRVLVADFIDLVWTCVTSFFSH 180
            L +SP++ K+++SG++G+ GD+ AQ  E+    +S           R  AV ID +++ GP LH  Y +LE  +P  AG  V  A+  V   ID FV DP+F   F   TG++E  S+   IL  LR  F   V    ++ L + PLQ   F   P++FRVL  +  D+ WT V S+FSH
Sbjct:  193 LRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNTRRLTAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAALHVV---IDTFVFDPMFVASFFCVTGMLESRSLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSH 369          
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Match: A0A1Z5JHC7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHC7_FISSO)

HSP 1 Score: 108 bits (270), Expect = 2.130e-25
Identity = 65/192 (33.85%), Postives = 102/192 (53.12%), Query Frame = 0
Query:    4 LDKSPVITKSISSGLIGMMGDVVAQTIEWGFGDSSAPWSDRHMIW---RSCAVMIDGLIVNGPLLHYAYDILERCMPAGESVLGAVMQVCVGIDVFVIDPVFAFLFVWSTGLVEGLSV-------EHDILHTLRCNFLSMVMWLVVIGLCWAPLQIYLFNRYPVQFRVLVADFIDLVWTCVTSFFSHVQRAR 185
            L   P++TKSI+S ++G +GD VAQ   W          + H I+   R  A M++GL+ +GPL+H AY + E  +P G ++  A++ V   +D  ++D VF     W TGL+EG S        + DI  TL+ ++L+ +  L        P+++  F   PV +RVL  + +D+VW  V SF SH  R +
Sbjct:   94 LTTQPLLTKSITSAVMGCVGDAVAQ--RW----------EHHPIYSKRRGLAAMVEGLLWSGPLMHRAYSLFEHILPVGNNMGFALIHVL--LDSLLLDSVFVTSAFWITGLLEGFSFKQLRQQYQRDIGGTLKASWLTSLFLL--------PVEVVCFRYLPVTYRVLAVNVLDIVWDTVISFMSHKTRGK 263          
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Match: D8LRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI6_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 2.370e-25
Identity = 65/181 (35.91%), Postives = 97/181 (53.59%), Query Frame = 0
Query:    4 LDKSPVITKSISSGLIGMMGDVVAQTIEWGFGDSSA---PWSDRHMIWRSCAVMIDGLIVNGPLLHYAYDILERCMPA-GESVLGAVMQVCVGIDVFVIDPVFAFLFVWSTGLVEGLSVEHDILHTLRCNFLSMVMWLVVIGLCWAPLQIYLFNRYPVQFRVLVADFIDLVWTCVTSFFSH 180
            L +SP++ K+++SG++G+ GD+ AQ  E+     S    P+   +   R  AV ID +++ GP LH  Y +LE  +P  G   + A + V   ID FV DP+F   F   TG++E   +   IL  LR  F   V    ++ L + PLQ   F   P++FRVL  +  D+ WT V S+FSH
Sbjct:  193 LRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNNR--RLTAVAIDSILITGPALHALYGLLECLIPTVGGGFVPAALHVV--IDTFVFDPMFVASFFCVTGMLESRPLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSH 369          
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Match: D7G2D0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D0_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 4.040e-23
Identity = 47/131 (35.88%), Postives = 76/131 (58.02%), Query Frame = 0
Query:   47 IWRSCAVMIDGLIVNGPLLHYAYDILERCMPAGESVLGAVMQVCVGIDVFVIDPVFAFLFVWSTGLVEGLSVEHDILHTLRCNFLSMVMWLVVIGLCWAPLQIYLFNRYPVQFRVLVADFIDLVWTCVTSF 177
            +W + AV I       P LH  YD LE+ +PA +S   A+ QV   ID  V++      F+   G +EG + E DI+ T++ ++L++V+WL+V  +   P Q+YLF  +P+++RVL+AD   L+W  +  F
Sbjct:    4 VWETWAVAIYCFFFVAPFLHVVYDALEKWIPADKSQANAIAQVT--IDSLVVETFLGLTFIVMVGFLEGETWEEDIVPTIKSDYLTLVVWLMVTNMVMGPAQVYLFVHFPLKWRVLIADGKGLLWNFIACF 132          
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Match: A0A7S3DNH3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNH3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 9.100e-23
Identity = 66/199 (33.17%), Postives = 102/199 (51.26%), Query Frame = 0
Query:    4 LDKSPVITKSISSGLIGMMGDVVAQTIE-WGFGDSSAPWSDRHM------IWRSCAVMIDGLIVNGPLLHYAYDILERCMPAGESVL-----GAVMQVCVGIDVFVIDPVFAFLFVWSTGLVEGLSVEH-------DILHTLRCNFLSMVMWLVVIGLCWAPLQIYLFNRYPVQFRVLVADFIDLVWTCVTSFFSHVQR 183
            L + P++TKS+++GL+G  GD VAQ +E W       P   RH         R  ++++DGL+++GPL+H+AY+ +E   P   +         +    V  D  V+D +F    +W+TGL+EG SV         D + TL+     +  +LV+      PL++  F   PV FRVL  +FIDL+W  V S  +H  R
Sbjct:  177 LQRHPLVTKSVTAGLLGWGGDSVAQRLEGW-----KQPPQGRHSRQGRYDARRGGSLLVDGLLLSGPLMHFAYEWMETWWPIPSATAYWWQGWGIALTHVLADTLVLDSIFVASTLWTTGLLEGYSVRQCWWQFRQDYIPTLKAG--GVTSFLVL------PLELACFKCLPVSFRVLAVNFIDLIWDTVISHMAHKSR 362          
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Match: A0A6H5L428_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L428_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.150e-21
Identity = 44/68 (64.71%), Postives = 59/68 (86.76%), Query Frame = 0
Query:   91 VGIDVFVIDPVFAFLFVWSTGLVEGLSVEHDILHTLRCNFLSMVMWLVVIGLCWAPLQIYLFNRYPVQ 158
            +G+DV VIDPVFAF+F+W TGL+EG SV+ +IL T+  ++ ++V+WLVVIG+ WAP+QIYLFNRYPVQ
Sbjct:  651 IGVDVLVIDPVFAFMFIWYTGLIEGRSVQGEILPTIVHHYPTLVLWLVVIGVGWAPVQIYLFNRYPVQ 718          
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Match: A0A7S3LFT8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFT8_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.240e-18
Identity = 54/183 (29.51%), Postives = 98/183 (53.55%), Query Frame = 0
Query:    4 LDKSPVITKSISSGLIGMMGDVVAQTIEWGFGD--SSAPW-SDRHMIWRSCAVMIDGLIVNGPLLHYAYDILERCMPAGESVLGAVMQVCVGIDVFVIDPVFAFLFVWSTGLVEGLSVEHDILHTLRCNFLSMVMWLVVIGLCWAPLQIYLFNRYPVQFRVLVADFIDLVWTCVTSFFSHVQR 183
            L  +P++TK I++G+IG +GD +AQ++E       ++AP    ++   R  + ++ G  ++GPL+H+AYD+ +R +P   +  GA +   +   +F +D +F       TG +EG      ++  LR ++L  +       +   P++   F   P+ +RVL  +FIDL+W  V SF +H  R
Sbjct:  183 LSVNPLVTKGITAGVIGSLGDFLAQSLENFLHQRKNNAPVVHSKYDPRRGLSTLLYGFFISGPLMHFAYDLFDRVLPIHGN--GAALVHVLADSIF-LDAIFVAATYIVTGRMEGYKFRQ-VMPQLRKDYLPTLKASWATSIFLMPVEFVCFRFLPLNYRVLAVNFIDLIWDGVISFMAHRSR 361          
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Match: A0A448Z075_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z075_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.420e-17
Identity = 55/211 (26.07%), Postives = 103/211 (48.82%), Query Frame = 0
Query:    2 DSLDKSPVITKSISSGLIGMMGDVVAQTIEW------------GFGD------------SSAPWSDRHMIWRSCAVMIDGLIVNGPLLHYAYDILERCMPA---GESVLGAVMQVCVGIDVFVIDPVFAFLFVWSTGLVEGLSVEHDILHTLRCNFLSMVMWLVVIGLCWAPLQIYLFNRYPVQFRVLVADFIDLVWTCVTSFFSHVQRAR 185
            D L  SP+ TK++++ ++ + GD +AQ IE             GFG             S   W   +   R  +++ + ++++GPLLH++Y+ +E+ +P    G+S   A +   + ID F++D +F  +   +TG+ EG     +I+   + +F   +    + G+C  P+Q  +F   P+  RVL  + ID+ W    S+  H +R +
Sbjct:  154 DLLACSPLWTKTVTTSVLAVAGDSIAQYIETHKFSPSVVEGDEGFGKTKDVAVSAFSVGSPFSWLKDYDRRRGISILGENMLISGPLLHFSYNFMEQLIPTNGGGKSAFLAALSHSL-IDNFILDTIFLAIMFVTTGIAEG--YVQEIIPQFKKDFFPTLRTGWIAGICLLPVQFLIFRFLPLSLRVLGVNIIDMFWGAYVSYMVHRRRQK 361          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig131.2323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMD9_ECTSI7.240e-8566.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMD8_ECTSI2.530e-4946.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JK43_9PHAE1.360e-2537.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Z5JHC7_FISSO2.130e-2533.85Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
D8LRI6_ECTSI2.370e-2535.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2D0_ECTSI4.040e-2335.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3DNH3_9STRA9.100e-2333.17Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A6H5L428_9PHAE2.150e-2164.71Reverse transcriptase domain-containing protein n=... [more]
A0A7S3LFT8_9STRA3.240e-1829.51Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A448Z075_9STRA3.420e-1726.07Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 111..176
e-value: 1.4E-10
score: 41.3
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 2..180
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 2..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..179
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..185
NoneNo IPR availableTMHMMTMhelixcoord: 162..181
NoneNo IPR availableTMHMMTMhelixcoord: 130..152
NoneNo IPR availableTMHMMTMhelixcoord: 96..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig131contigF-serratus_M_contig131:443823..449278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig131.2323.1mRNA_F-serratus_M_contig131.2323.1Fucus serratus malemRNAF-serratus_M_contig131 443823..449278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig131.2323.1 ID=prot_F-serratus_M_contig131.2323.1|Name=mRNA_F-serratus_M_contig131.2323.1|organism=Fucus serratus male|type=polypeptide|length=186bp
SDSLDKSPVITKSISSGLIGMMGDVVAQTIEWGFGDSSAPWSDRHMIWRS
CAVMIDGLIVNGPLLHYAYDILERCMPAGESVLGAVMQVCVGIDVFVIDP
VFAFLFVWSTGLVEGLSVEHDILHTLRCNFLSMVMWLVVIGLCWAPLQIY
LFNRYPVQFRVLVADFIDLVWTCVTSFFSHVQRAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22