prot_F-serratus_M_contig131.2321.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig131.2321.1
Unique Nameprot_F-serratus_M_contig131.2321.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length198
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig131.2321.1 vs. uniprot
Match: A0A6H5L735_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L735_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.260e-24
Identity = 72/171 (42.11%), Postives = 95/171 (55.56%), Query Frame = 0 
Query:   29 NEFQSPDAYTQDGVENAAIDRAMVGMMHNDF--LYVGIETDSDLDE-ENVGGTDIVVRMFDPDDLAKEEGVQYGGDGDDTLMGMAAGSID----IVIVGSTYSDDDHLFGLDTPTGEMDWYIAKLDRDDLSVVDDYVYVNGTTNDDQEATAVAV--ASDGGFVVAGWTWGE 190
            ++ Q   A+ Q G  N A D A+ G    D   L V + T ++L    N GGTD VV  FD D L   +  Q+GGDGDDT+  MA   ++    I+IVGST SDD+HLFGLDT   E D++IA L  DDL V   +V  NG+  +++E T V V    +G +  AGW   E
Sbjct:   35 DDAQVVSAFAQGGTSNVADDYAVSGFWFEDTAQLVVAVNTGNELSGGSNAGGTDFVVIRFDSD-LEVVDSAQFGGDGDDTITSMAVDEVNQSGSIIIVGSTASDDEHLFGLDTAPREQDYFIAALSSDDLEVTKQFV--NGSQYNNEELTVVGVEPVDEGSYFAAGWAASE 202
[Close]
BLAST of mRNA_F-serratus_M_contig131.2321.1 vs. uniprot
Match: D8LMC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMC2_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 6.390e-21
Identity = 67/166 (40.36%), Postives = 93/166 (56.02%), Query Frame = 0 
Query:   29 NEFQSPDAYTQDGVENAAIDRAMVGMMHNDF--LYVGIETDSDLDE-ENVGGTDIVVRMFDPDDLAKEEGVQYGGDGDDTLMGMAAGSI---DIVIVGSTYSDDDHLFGLDTPTGEMDWYIAKLDRDDLSVVDDYVYVNGTTNDDQEATAVAVAS--DGGFVVAGW 186
            ++ Q   A+ Q G  N   D A+ G+   D   L+V   T ++L    N GGTD  +  ++ D L  ++ VQYGGDGDDT+  MA        IVIVGST SD++HLFGLDT   E D++IA+L   DL V   +V  NG+  +++E T V +    DG +  AGW
Sbjct:   41 DDAQEVTAFAQGGTTNLVDDFAVAGVWIVDTSQLFVAANTGNELSGGTNAGGTDFAIIKYNSD-LELQDSVQYGGDGDDTITAMAVDESVQSGIVIVGSTASDEEHLFGLDTAPREQDYFIAELSSGDLEVTKQFV--NGSQFNNEELTVVGLEPVLDGAYFAAGW 203
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig131.2321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L735_9PHAE1.260e-2442.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMC2_ECTSI6.390e-2140.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.873

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig131contigF-serratus_M_contig131:194563..204118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig131.2321.1mRNA_F-serratus_M_contig131.2321.1Fucus serratus malemRNAF-serratus_M_contig131 194249..204118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig131.2321.1 ID=prot_F-serratus_M_contig131.2321.1|Name=mRNA_F-serratus_M_contig131.2321.1|organism=Fucus serratus male|type=polypeptide|length=198bp
MFSRRTLVALLFSCIVVATRGQQDDDDDNEFQSPDAYTQDGVENAAIDRA
MVGMMHNDFLYVGIETDSDLDEENVGGTDIVVRMFDPDDLAKEEGVQYGG
DGDDTLMGMAAGSIDIVIVGSTYSDDDHLFGLDTPTGEMDWYIAKLDRDD
LSVVDDYVYVNGTTNDDQEATAVAVASDGGFVVAGWTWGEYFEENAGA
back to top