prot_F-serratus_M_contig130.2256.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig130.2256.1
Unique Nameprot_F-serratus_M_contig130.2256.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length223
Homology
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 3.000e-128
Identity = 188/224 (83.93%), Postives = 197/224 (87.95%), Query Frame = 0
Query:    2 DPNAPRKSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFIKMKNWVEELRTNVPEGKLVLAIACTKTDMESNRVVSRARAQQFATEVGGILCETSAKENWGVNELFTKVCDRAMETRGAXXXXXXXXXXXXXX--RNKFGLSPAAHAAGFGDGTG-ESRGGCCG 222
            +P AP+ SVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITA+DGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESF KMK+WVEELRTNVPEGKLVLAIACTKTDMES RVVSRARA+ FATEVGGI+CETSAKENWGVNELF +VCDRAMETRG                 ++KFGLSPAAHAAGFG  TG ES GGCCG
Sbjct:    3 EPGAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAMETRGPELRGQASGGAAGTGGRKSKFGLSPAAHAAGFGGDTGAESGGGCCG 226          
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA)

HSP 1 Score: 287 bits (735), Expect = 3.310e-96
Identity = 136/170 (80.00%), Postives = 152/170 (89.41%), Query Frame = 0
Query:   10 VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFIKMKNWVEELRTNVPEGKLVLAIACTKTDMESNRVVSRARAQQFATEVGGILCETSAKENWGVNELFTKVCDRAMETRG 179
            VEFKVVVLGDKGVGKTCLVLRFIEGYF+PKQQSTIGAFFLTK+I    G  CKMQIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE+SF KMK+WVEEL+TNVPEGKLVLAIAC KTD+ESNRVVSRARA+Q++  +  I CETSAKENWGVNE+F KV ++ +ETRG
Sbjct:   11 VEFKVVVLGDKGVGKTCLVLRFIEGYFSPKQQSTIGAFFLTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVSEKVIETRG 180          
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK)

HSP 1 Score: 271 bits (693), Expect = 3.600e-89
Identity = 128/170 (75.29%), Postives = 146/170 (85.88%), Query Frame = 0
Query:   10 VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFIKMKNWVEELRTNVPEGKLVLAIACTKTDMESNRVVSRARAQQFATEVGGILCETSAKENWGVNELFTKVCDRAMETRG 179
            VEFKVVVLGDKGVGK+CLVLRFIEGYF+PKQQSTIGAFFL+K I A+DGT CKMQIWDTAGQERFRAMA +YYRNAA A+VCFDI DEESF KMK+WV+EL+ NVPEG+LVLAIA TKTD+E+ R VSR RA+Q+A  +G + CETSAKENWGV E+F     R +E RG
Sbjct:   12 VEFKVVVLGDKGVGKSCLVLRFIEGYFSPKQQSTIGAFFLSKTIEAADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVFEAAAARVLELRG 181          
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA)

HSP 1 Score: 233 bits (594), Expect = 3.960e-75
Identity = 112/165 (67.88%), Postives = 133/165 (80.61%), Query Frame = 0
Query:   11 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFIKMKNWVEELRTNVPEGK--LVLAIACTKTDMESNRVVSRARAQQFATEVGGILCETSAKENWGVNELFTKVCDR 173
            EFK+ VLGDKGVGKTCLVLRFIEGYF+  QQSTIGAFFLTK +  + G +CK+QIWDTAGQERFRAMAP+YYRNAA A+VC DI DEESF KMK+WVEE++ NVP G+  L + +A  KTD+E  RVVSRARA++FA  +G  + ETSA+ENWGV  LF   C+R
Sbjct:    1 EFKICVLGDKGVGKTCLVLRFIEGYFSQNQQSTIGAFFLTKSLPVN-GVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLFECACER 164          
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN)

HSP 1 Score: 234 bits (598), Expect = 6.250e-75
Identity = 121/206 (58.74%), Postives = 150/206 (72.82%), Query Frame = 0
Query:    7 RKSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFIKMKNWVEELRTNVPEGKLVLAIACTKTDMESNRVVSRARAQQFATEVGGILCETSAKENWGVNELFTKVCDRAMETRGAXXXXXXXXXXXXXXR-NKFGLSPAAHAAGFGD 211
            +K+ EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I  + G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MK+WVEEL+TNV +  LV+AIAC K D+++ R VSRARA+QFA  +  I+ +TSAKEN+GV ELF  V +  ++ RG                    GLS AA AAGF D
Sbjct:    6 QKNYEFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDT-RQVSRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELCSTPGAPRGGGGGPGGRGLSLAARAAGFRD 210          
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.530e-74
Identity = 111/173 (64.16%), Postives = 141/173 (81.50%), Query Frame = 0
Query:    7 RKSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFIKMKNWVEELRTNVPEGKLVLAIACTKTDMESNRVVSRARAQQFATEVGGILCETSAKENWGVNELFTKVCDRAMETRG 179
            ++  EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I  S+G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MK+WVEEL+TNV +  LV+AIAC K D+++ R VSRARA+ FA  +  I+ +TSAKEN+GV+ELFT V ++ +  RG
Sbjct:   11 QRHYEFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDT-RQVSRARAESFARSIDAIILDTSAKENFGVSELFTAVSEQVITLRG 182          
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA)

HSP 1 Score: 228 bits (581), Expect = 3.280e-72
Identity = 109/159 (68.55%), Postives = 129/159 (81.13%), Query Frame = 0
Query:   21 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFIKMKNWVEELRTNVPEGKLVLAIACTKTDMESNRVVSRARAQQFATEVGGILCETSAKENWGVNELFTKVCDRAMETRG 179
            GVGKTCLVLRFIEG F  KQQSTIGAFFLTK++   DG++CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE SF  MK+WV+ELR N  +  L+LAIAC K D+ S RVVSR RA+ FA+ +  IL +TSAKEN GVNELF KV +R +E++G
Sbjct:   17 GVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVTERVIESQG 175          
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA)

HSP 1 Score: 223 bits (567), Expect = 2.680e-70
Identity = 110/176 (62.50%), Postives = 137/176 (77.84%), Query Frame = 0
Query:    5 APRKSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFIKMKNWVEELRTNVPEGKLVLAIACTKTDMESNRVVSRARAQQFATEVG-GILCETSAKENWGVNELFTKVCDRAMETRG 179
            A  KS EFKVV+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I  + G  CK+QIWDTAGQERFRAMAP+YYRNAA AVVCFD  D+ +F  M+ WVEELR NV + KLV+AIA TK+D++ NR  +R +A++FA+ +   ++ ETSAK + GV ELF  V +R +E RG
Sbjct:    9 AAPKSYEFKVVLLGDRGVGKTCLVLRFIEGLYNARQQSTIGAFFLTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATVAERVIELRG 184          
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Match: A0A7R9U6V0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V0_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.870e-57
Identity = 90/166 (54.22%), Postives = 117/166 (70.48%), Query Frame = 0
Query:   11 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFIKMKNWVEELRTNVPEGKLVLAIACTKTDMESNRVVSRARAQQFATEVGGILCETSAKENWGVNELFTKVCDRAME 176
            EFKVVV+G+K VGKT LVLRFI+G F P+QQ TIGAFF +K +  + G  C +Q+WDTAGQERFRA+ P+YYR A  A+VCFD+  E SF  M+ WV+ELR N   G +V+AIA TK D+E+ RVV +   + +A  +G +  ETSAK N GV +LF  +  R +E
Sbjct:    8 EFKVVVVGEKSVGKTSLVLRFIDGCFQPQQQPTIGAFFFSKHLVLAGGAACVLQVWDTAGQERFRAITPMYYRQAMGAIVCFDVTSEASFETMQGWVKELRENTEPGSIVIAIAATKADLEAARVVDQEGPRLYAASIGALYAETSAKANVGVQDLFVTLGQRMLE 173          
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Match: A0A6S9BP90_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9BP90_9STRA)

HSP 1 Score: 189 bits (481), Expect = 3.000e-56
Identity = 95/182 (52.20%), Postives = 124/182 (68.13%), Query Frame = 0
Query:    3 PNAPRKSVEFKVVVLGDKGVGKTCLVLRFIEGYF--APKQQSTIGAFFLTKQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFIKMKNWVEELRTNVPEGKLVLAIACTKTDM----ESNRVVSRARAQQFATEVGGILCETSAKENWGVNELFTKVCDRAMETR 178
            P+      EFKVV+LGD   GKT LVLRF EGY+  AP+  ST+GAFF+TK+I  S G  CK+QIWDTAGQ +FRAMAP+YYRNAA A+VC+D+ D +SF  M+ W++EL  NVP G +V+AIA TKTD+    ++  +V    AQ  A  +G I  +TSAK N  V  LF +V +R ++ R
Sbjct:    2 PHVELPQAEFKVVMLGDTNAGKTSLVLRFAEGYYRDAPRS-STVGAFFITKRIQTSSGITCKIQIWDTAGQSQFRAMAPMYYRNAAAAIVCYDVTDPQSFTVMREWLDELHRNVPAGSIVIAIAATKTDLSQTADATTLVPPNEAQDVANALGAIFVDTSAKSNSNVQVLFQRVAERVLQFR 182          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS40_ECTSI3.000e-12883.93Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XTR6_9STRA3.310e-9680.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y4J2_HETAK3.600e-8975.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZBF8_9STRA3.960e-7567.88P-loop containing nucleoside triphosphate hydrolas... [more]
F0XY01_AURAN6.250e-7558.74Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3NK22_9STRA2.530e-7464.16Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2BGJ2_9STRA3.280e-7268.55Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ZPM5_9STRA2.680e-7062.50Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U6V0_9STRA1.870e-5754.22Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6S9BP90_9STRA3.000e-5652.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 12..33
score: 50.62
coord: 117..130
score: 19.15
coord: 54..76
score: 49.29
coord: 35..51
score: 29.94
coord: 152..174
score: 31.93
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 12..177
e-value: 5.0E-65
score: 232.0
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 9..177
e-value: 8.6E-22
score: 88.4
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 17..216
e-value: 9.3E-4
score: 5.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 14..177
e-value: 1.2E-10
score: 17.0
NoneNo IPR availableGENE3D3.40.50.300coord: 4..188
e-value: 4.8E-57
score: 194.4
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 10..179
NoneNo IPR availablePANTHERPTHR24073:SF366RAS-RELATED PROTEIN RAB-5Ccoord: 10..179
NoneNo IPR availablePROSITEPS51419RABcoord: 7..221
score: 28.509
IPR001806Small GTPasePFAMPF00071Rascoord: 13..174
e-value: 3.2E-51
score: 173.1
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 11..169
e-value: 1.3E-22
score: 78.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig130contigF-serratus_M_contig130:597382..604370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig130.2256.1mRNA_F-serratus_M_contig130.2256.1Fucus serratus malemRNAF-serratus_M_contig130 597045..605346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig130.2256.1 ID=prot_F-serratus_M_contig130.2256.1|Name=mRNA_F-serratus_M_contig130.2256.1|organism=Fucus serratus male|type=polypeptide|length=223bp
MDPNAPRKSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLT
KQITASDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESF
IKMKNWVEELRTNVPEGKLVLAIACTKTDMESNRVVSRARAQQFATEVGG
ILCETSAKENWGVNELFTKVCDRAMETRGAELRGETAGGQGAGGRNKFGL
SPAAHAAGFGDGTGESRGGCCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase