prot_F-serratus_M_contig1269.1994.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1269.1994.1
Unique Nameprot_F-serratus_M_contig1269.1994.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length267
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1269.1994.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 175..198
e-value: 4.2
score: 16.3
coord: 199..222
e-value: 7.9
score: 14.1
coord: 151..174
e-value: 0.038
score: 23.1
coord: 103..126
e-value: 39.0
score: 8.5
coord: 127..150
e-value: 12.0
score: 12.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 29..241
e-value: 2.9E-32
score: 113.8
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 154..212
e-value: 2.8E-12
score: 46.2
NoneNo IPR availablePANTHERPTHR24366FAMILY NOT NAMEDcoord: 63..219
NoneNo IPR availablePANTHERPTHR24366:SF102LEUCINE RICH REPEAT CONTAINING 15coord: 63..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..266
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.694
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 72..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1269contigF-serratus_M_contig1269:83947..91219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1269.1994.1mRNA_F-serratus_M_contig1269.1994.1Fucus serratus malemRNAF-serratus_M_contig1269 83496..92984 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1269.1994.1 ID=prot_F-serratus_M_contig1269.1994.1|Name=mRNA_F-serratus_M_contig1269.1994.1|organism=Fucus serratus male|type=polypeptide|length=267bp
MRAERAFGIFTVCVALTGIWETEAADPTPCLDSTSTSYRCSYDGSSTAID
LSFDSAYCEIDDDQLEYVSDCLDDFGRTNIVEKMSLNYQTRITYLPRDIF
SGLTNLDWMVLYGQSLTEIPREVFNGLSNMTQLAISFTDLETLPKGLFDD
LLLLESLDLYGNQIYSLAEGLFERLVILKKLWLADNELTTLNEAIFTDMV
SLEELYLQYNDLQCLPASSATTIQIDSEDIRNGTCDCDQPVDGPSLCADA
ITCLPGNEGYLCRFLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt