prot_F-serratus_M_contig1251.1898.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1251.1898.1
Unique Nameprot_F-serratus_M_contig1251.1898.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length202
Homology
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Match: A0A1Z4F594_9PHAE (Photosystem I (Fragment) n=38 Tax=Phaeophyceae TaxID=2870 RepID=A0A1Z4F594_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 1.390e-131
Identity = 188/201 (93.53%), Postives = 196/201 (97.51%), Query Frame = 0
Query:    1 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDSTE 201
            MYAIPPYAFMAKDFTT+AALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEAN+DNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQA+SGKA+YGFDLLL+SK SPA++AGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLH T LILVKGALDARGSKLMPD  +
Sbjct:  338 MYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKD 538          
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Match: A0A7T7DA72_9STRA (Photosystem I (Fragment) n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7T7DA72_9STRA)

HSP 1 Score: 382 bits (981), Expect = 4.920e-131
Identity = 183/201 (91.04%), Postives = 193/201 (96.02%), Query Frame = 0
Query:    1 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDSTE 201
            MYAIPPYAFMAKDFTT+AALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANK+NVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQIL+EPVFAQFIQA+SGKA+YGFD+LL+S  SPAT A SEIWLPGW+EAINNDKNDLFLTIGPGDFL+HHAIALGLH T LILVKGALDARGSKLMPD  +
Sbjct:  166 MYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKNNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILIEPVFAQFIQAASGKALYGFDILLSSTQSPATTASSEIWLPGWLEAINNDKNDLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKD 366          
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Match: A0A7T7DA50_9STRA (Photosystem I (Fragment) n=2 Tax=Phaeosacciales TaxID=2797541 RepID=A0A7T7DA50_9STRA)

HSP 1 Score: 375 bits (963), Expect = 2.560e-130
Identity = 179/201 (89.05%), Postives = 190/201 (94.53%), Query Frame = 0
Query:    1 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDSTE 201
            MYAIPPYAFMAKDFTT+AALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPE NK+NVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQIL+EPVFAQFIQA+SGKA+YGFD+LL+S  SPA  A SEIWLPGW+EA+NNDKN LFLTIGPGDFL+HHAIALGLH T LILVKGALDARGSKLMPD  +
Sbjct:   25 MYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPELNKNNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILIEPVFAQFIQAASGKALYGFDVLLSSSQSPAASASSEIWLPGWLEAVNNDKNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKD 225          
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Match: A0A0H5BN86_DICDH (Photosystem I (Fragment) n=2 Tax=Dictyotaceae TaxID=2874 RepID=A0A0H5BN86_DICDH)

HSP 1 Score: 379 bits (974), Expect = 8.230e-130
Identity = 181/201 (90.05%), Postives = 191/201 (95.02%), Query Frame = 0
Query:    1 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDSTE 201
            MYAIPPYAFMAKDFTT+AALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPE NKDNVLARMLEHKEAIISHLSWV LFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQA+SGK++YGFD  L+S  +PATIAGS++W+PGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLH T LILVKGALDARGSKLMPD  +
Sbjct:  169 MYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEVNKDNVLARMLEHKEAIISHLSWVCLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKSLYGFDFFLSSNQNPATIAGSQLWIPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKD 369          
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Match: A0A7T7IGN4_9STRA (PsaB (Fragment) n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A7T7IGN4_9STRA)

HSP 1 Score: 372 bits (956), Expect = 9.960e-130
Identity = 179/201 (89.05%), Postives = 192/201 (95.52%), Query Frame = 0
Query:    1 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDSTE 201
            MYA+ PYAFMAKDFTT+AALYTHHQYIAGFLMVGAFAHGAIFFVRDYDP+ANK+NVLARMLEHKEAIISHLSWV LFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQA+SGKA+YGFD LL+S++S AT+AGS IWLPGW+EAINN+KNDLFLTIGPGDFLIHHAIALGLH T LILVKGALDARGSKLMPD  +
Sbjct:   12 MYALSPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPKANKNNVLARMLEHKEAIISHLSWVCLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKALYGFDTLLSSQTSSATVAGSAIWLPGWLEAINNEKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKD 212          
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Match: A0A0R6MFW0_UNDPI (Photosystem I P700 chlorophyll a apoprotein A2 n=71 Tax=Stramenopiles TaxID=33634 RepID=A0A0R6MFW0_UNDPI)

HSP 1 Score: 389 bits (1000), Expect = 2.260e-129
Identity = 187/201 (93.03%), Postives = 196/201 (97.51%), Query Frame = 0
Query:    1 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDSTE 201
            MYAIPPYAFMAKDFTT+AALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEAN+DNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQA+SGKA+YGFDLLL+SK SPA++AGSEIWLPGWIEAINNDKNDLFLTIGPGDFL+HHAIALGLH T LILVKGALDARGSKLMPD  +
Sbjct:  352 MYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKD 552          
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Match: A0A7T7DA56_9PHAE (Photosystem I (Fragment) n=1 Tax=Choristocarpus tenellus TaxID=116065 RepID=A0A7T7DA56_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 4.970e-129
Identity = 182/201 (90.55%), Postives = 193/201 (96.02%), Query Frame = 0
Query:    1 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDSTE 201
            +YA+ PYAFMAKD+TT+AALYTHHQYIAGFLMVGAFAHGAIFFVRDY+PE NKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQA+SGKA+YGFD+LL+SK SPA+IAGSEIWLP WIEAIN DKNDLFLTIGPGDFLIHHAIALGLHVT LILVKGALDARGSKLMPD  +
Sbjct:  167 IYALSPYAFMAKDYTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYEPENNKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKALYGFDILLSSKESPASIAGSEIWLPSWIEAINTDKNDLFLTIGPGDFLIHHAIALGLHVTTLILVKGALDARGSKLMPDKKD 367          
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Match: A0A7T7DA64_9STRA (Photosystem I (Fragment) n=11 Tax=Ochrophyta TaxID=2696291 RepID=A0A7T7DA64_9STRA)

HSP 1 Score: 377 bits (968), Expect = 9.660e-129
Identity = 181/201 (90.05%), Postives = 192/201 (95.52%), Query Frame = 0
Query:    1 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDSTE 201
            MYAIPPYAFM+KDFTT+A+LYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANK+NVLARMLEHKEAIISHLSWV LFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQA+SGKA+YGFD LLAS  SPATIAGS IWLPGW+EAIN++KNDLFLTIGPGDFL+HHAIALGLH T LILVKGALDARGSKLMPD  +
Sbjct:  170 MYAIPPYAFMSKDFTTQASLYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKNNVLARMLEHKEAIISHLSWVCLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKALYGFDTLLASSDSPATIAGSAIWLPGWLEAINSEKNDLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKD 370          
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Match: A0A7T7DA65_9STRA (Photosystem I (Fragment) n=3 Tax=Stramenopiles TaxID=33634 RepID=A0A7T7DA65_9STRA)

HSP 1 Score: 371 bits (953), Expect = 6.990e-127
Identity = 178/201 (88.56%), Postives = 191/201 (95.02%), Query Frame = 0
Query:    1 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDSTE 201
            MYA+ PYAF++KDFTT+AALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQA+SGKA+YGFD LL+S  SPA++A S IWLPGW+EAIN++KNDLFLTIGPGDFLIHHAIALGLH T LILVKGALDARGSKLMPD  +
Sbjct:  150 MYALSPYAFISKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKALYGFDTLLSSPDSPASVASSAIWLPGWLEAINSEKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKD 350          
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Match: A0A7T7IGM3_9STRA (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Stichogloea TaxID=82160 RepID=A0A7T7IGM3_9STRA)

HSP 1 Score: 382 bits (982), Expect = 1.140e-126
Identity = 185/201 (92.04%), Postives = 193/201 (96.02%), Query Frame = 0
Query:    1 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDSTE 201
            MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANK+NVLARMLEHKEAIISHLSWV LFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKA+YGFD+LLAS  SPA+ AGSEIWLPGW+EAIN+DKNDLFLTIGPGDFL+HHAIALGLH T LILVKGALDARGSKLMPD  +
Sbjct:  352 MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKNNVLARMLEHKEAIISHLSWVCLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKALYGFDVLLASPQSPASAAGSEIWLPGWLEAINSDKNDLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKD 552          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1251.1898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z4F594_9PHAE1.390e-13193.53Photosystem I (Fragment) n=38 Tax=Phaeophyceae Tax... [more]
A0A7T7DA72_9STRA4.920e-13191.04Photosystem I (Fragment) n=3 Tax=Ochrophyta TaxID=... [more]
A0A7T7DA50_9STRA2.560e-13089.05Photosystem I (Fragment) n=2 Tax=Phaeosacciales Ta... [more]
A0A0H5BN86_DICDH8.230e-13090.05Photosystem I (Fragment) n=2 Tax=Dictyotaceae TaxI... [more]
A0A7T7IGN4_9STRA9.960e-13089.05PsaB (Fragment) n=2 Tax=Ochrophyta TaxID=2696291 R... [more]
A0A0R6MFW0_UNDPI2.260e-12993.03Photosystem I P700 chlorophyll a apoprotein A2 n=7... [more]
A0A7T7DA56_9PHAE4.970e-12990.55Photosystem I (Fragment) n=1 Tax=Choristocarpus te... [more]
A0A7T7DA64_9STRA9.660e-12990.05Photosystem I (Fragment) n=11 Tax=Ochrophyta TaxID... [more]
A0A7T7DA65_9STRA6.990e-12788.56Photosystem I (Fragment) n=3 Tax=Stramenopiles Tax... [more]
A0A7T7IGM3_9STRA1.140e-12692.04Photosystem I P700 chlorophyll a apoprotein A2 n=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001280Photosystem I PsaA/PsaBPRINTSPR00257PHOTSYSPSAABcoord: 66..88
score: 84.31
coord: 166..184
score: 70.6
coord: 18..44
score: 76.42
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 1..200
e-value: 3.2E-95
score: 319.9
IPR036408Photosystem I PsaA/PsaB superfamilyGENE3D1.20.1130.10coord: 1..201
e-value: 6.9E-100
score: 337.3
IPR036408Photosystem I PsaA/PsaB superfamilySUPERFAMILY81558Photosystem I subunits PsaA/PsaBcoord: 1..199
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 1..199
NoneNo IPR availablePANTHERPTHR30128:SF4coord: 1..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..87
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..188
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 26..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1251contigF-serratus_M_contig1251:115299..115904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1251.1898.1mRNA_F-serratus_M_contig1251.1898.1Fucus serratus malemRNAF-serratus_M_contig1251 115272..115904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1251.1898.1 ID=prot_F-serratus_M_contig1251.1898.1|Name=mRNA_F-serratus_M_contig1251.1898.1|organism=Fucus serratus male|type=polypeptide|length=202bp
MYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPE
ANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEK
QILVEPVFAQFIQASSGKAIYGFDLLLASKSSPATIAGSEIWLPGWIEAI
NNDKNDLFLTIGPGDFLIHHAIALGLHVTALILVKGALDARGSKLMPDST
E*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001280PSI_PsaA/B
IPR036408PSI_PsaA/B_sf