prot_F-serratus_M_contig1239.1814.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1239.1814.1
Unique Nameprot_F-serratus_M_contig1239.1814.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length185
Homology
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.170e-30
Identity = 78/191 (40.84%), Postives = 102/191 (53.40%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQKLSIEC----VRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLTREKAIILMEELDDVI-NVPREK-LWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPF--GAVGYARQSVREHKMAPK 183
            M+  S+GGN Y +I  DDCTR+  V FLK KSDA  A    +ADY   +  ++ C     RTD GGEF+G+F     R  I  E TPP+TP+YNGVAERALGL  + A+    +  ++  + P    LWA+A+  AC   N + TT     KSP EL+ G  P      PF    V  +R+  R    A K
Sbjct:  205 MQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADY---RAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMNCTATTGNPGHKSPEELFHGTPPPVGSTHPFLKPLVFKSRRKARSQPRARK 392          
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Match: A0A6H5J7U9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U9_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 8.040e-30
Identity = 77/185 (41.62%), Postives = 100/185 (54.05%), Query Frame = 0
Query:    5 SLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQKLS-IECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLTREKAIILMEELDDVI----NVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPK 183
            SLGG  Y +I  DD TR+  V FLK KSDA  A    +A+       S +  VR+DNGGEF EGEF R   +  I  E TP  +P+Y+GVAERALGL  + A+    +   +     N P   LWA+A+ ++C+  N + TTS  E KSPYE+W G  P      PF  +    +  R HK  PK
Sbjct:   49 SLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYDGVAERALGLIEDAALAARIQAPTLYPGAPNYP--SLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPF-LIPAVYKVKRTHKSEPK 230          
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 2.480e-29
Identity = 75/188 (39.89%), Postives = 107/188 (56.91%), Query Frame = 0
Query:    4 SSLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQKLS-IECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLTREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGE 185
            +S+GG +Y +I  DD TR   + FL+ KSDA +A  + +A        S +E VR+DNGG+F  G+F    +   I  E TP  +PQYNGVAER LGL  E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++  +  SPYE+W+G+ P      PF    Y R   R  K+ PKGE
Sbjct:  106 ASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQ-RPSKLLPKGE 291          
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 2.800e-29
Identity = 80/188 (42.55%), Postives = 107/188 (56.91%), Query Frame = 0
Query:    4 SSLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQKLS-IECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLTREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGE 185
            +S+GG +Y +I  DD TR   + FLK KSDA  A  S +A        S +E VR+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL  E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++  + KSPYE+W+G+ P      PF    Y R   R  K+ PKGE
Sbjct:  738 ASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPSKLLPKGE 923          
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 2.820e-29
Identity = 80/188 (42.55%), Postives = 107/188 (56.91%), Query Frame = 0
Query:    4 SSLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQKLS-IECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLTREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGE 185
            +S+GG +Y +I  DD TR   + FLK KSDA  A  S +A        S +E VR+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL  E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++  + KSPYE+W+G+ P      PF    Y R   R  K+ PKGE
Sbjct:  445 ASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPSKLLPKGE 630          
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Match: A0A6H5KKB4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB4_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 3.510e-29
Identity = 70/158 (44.30%), Postives = 92/158 (58.23%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQKLSIEC----VRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLTREKAIILMEELDDVI-NVPREK-LWAQAMLFACDVTNKSVTTSTNEGKSPYELW 152
            M+  S+GGN Y +I  DDCTR+  V FLK KSDA  A    +ADY   +  ++ C     RTD GGEF+G+F     R  I  E TPP+TP+YNGVAERALGL  + A+    +  ++  + P    LWA+A+  AC   N + TT     KSPYEL+
Sbjct:    1 MQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEPYLADY---RAETVPCEVFVARTDGGGEFQGQFAEVCRRYGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMNCTATTGNPGHKSPYELF 155          
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 5.300e-29
Identity = 78/187 (41.71%), Postives = 107/187 (57.22%), Query Frame = 0
Query:    5 SLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQKLS-IECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLTREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGE 185
            S+GG  Y +I  DD TR   + FL+ KSDA +A  S +A        S +E VR+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL  E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++  + KSPYE+W+G++  A    PF    Y +   R  K+ PKGE
Sbjct:  343 SVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFLASVRADGIPSLVETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYCKWQ-RPSKLFPKGE 527          
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Match: A0A6H5KAM7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM7_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 5.670e-29
Identity = 79/190 (41.58%), Postives = 98/190 (51.58%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQKLSIECV-RTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLTREKAII----LMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGE 185
            MK  S+GGN Y +I  DD +R+  V FLK KSDA       +ADY T       C+ RTD GGEF+G+F     R  I  E TPP TP+YNGVAERALGL  + A+       +   D  N P   LWA+A+  AC   N + T S    KS YE++    P      PF      + S R+ K  PKGE
Sbjct:   32 MKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTKGVPCEVCIARTDGGGEFQGQFAELCRRHGIKEEFTPPHTPKYNGVAERALGLITDAALASRIQATQLFPDAPNHPG--LWAEAISCACHQLNCTATKSNEGDKSAYEMFHDSPPPVGSTYPFLKPAVFK-SRRKAKSQPKGE 218          
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 9.190e-29
Identity = 79/190 (41.58%), Postives = 110/190 (57.89%), Query Frame = 0
Query:    4 SSLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQKLS-IECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLTREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAV--GYARQSVREHKMAPKGE 185
            +S+GG +Y +I  DD TR   + FLK KSDA +A  S +A        S +E VR+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL    A+   I  + L   + +P+ ++LWA+AM +AC+  N +  ++  + KSPYE+W G+   A+H RP+  +   Y R   R  K+ PKGE
Sbjct:  644 ASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGE---ASHARPYPFLKPAYCRWQ-RPSKLLPKGE 829          
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 2.430e-28
Identity = 76/188 (40.43%), Postives = 110/188 (58.51%), Query Frame = 0
Query:    4 SSLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQKLS-IECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLTREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGE 185
            +S+GG +Y +I  DD TR   + FL+ KSDA +A  S +A+       S IE VR+DNGGEF  GEF    +   I  E TP  +P++NGVAER LGL  E A+   I  + L   + +P+ ++LWA+AM +AC+  N +  ++  + KSPYE+W+G++  A    PF    Y +   R  K+ PKGE
Sbjct:  489 ASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYCKWQ-RPSKLLPKGE 674          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1239.1814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LL52_9PHAE1.170e-3040.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J7U9_9PHAE8.040e-3041.62Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVR5_9PHAE2.480e-2939.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JBA7_9PHAE2.800e-2942.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE2.820e-2942.55Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKB4_9PHAE3.510e-2944.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JB16_9PHAE5.300e-2941.71Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KAM7_9PHAE5.670e-2941.58Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2M6_9PHAE9.190e-2941.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K622_9PHAE2.430e-2840.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 7..102
e-value: 5.0E-14
score: 52.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..156
score: 18.085
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..178
e-value: 4.5E-23
score: 83.5
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..158
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 3..158
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 8..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1239contigF-serratus_M_contig1239:226341..226895 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1239.1814.1mRNA_F-serratus_M_contig1239.1814.1Fucus serratus malemRNAF-serratus_M_contig1239 226341..226910 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1239.1814.1 ID=prot_F-serratus_M_contig1239.1814.1|Name=mRNA_F-serratus_M_contig1239.1814.1|organism=Fucus serratus male|type=polypeptide|length=185bp
MKHSSLGGNNYVVIFVDDCTRFKVVKFLKKKSDATTALLSLVADYITPQK
LSIECVRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLT
REKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYE
LWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf