prot_F-serratus_M_contig1235.1778.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1235.1778.1
Unique Nameprot_F-serratus_M_contig1235.1778.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length234
Homology
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Match: D7FVT2_ECTSI (RNase_PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT2_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 1.160e-115
Identity = 189/230 (82.17%), Postives = 208/230 (90.43%), Query Frame = 0
Query:    4 RRDGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAKSLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRCVVSVVVQVIVDDGAVLSAALNASTMALLNAGVEMTGMALSVTCCITGAATASALGRSVILDPCKAEESEAAATAVVATLAASGGVLSCRAVGAMSQEEYFACCEAAAQGTTAVRSFVRMSAEQKVLREVETVR 233
            RRDGR ANQIRPLA EQGILNRADGSARFVQGNTSVLAA+YGPA AKSLRM++ +GAT+DVSF+ ESG +SSADAE   LLRRSLEEV++RSRYPR VVSV++QVIVDDGAVLSAALNA+TMALLNAGVEMTGMALSVTCCIT    A+  GRSV+LDPCKAEE +AAATAVVATL+A GGVLSC AVG+MSQEEYFACCEAA+ GTTAVRSFVR+SAEQKV RE ETVR
Sbjct:    5 RRDGRRANQIRPLAAEQGILNRADGSARFVQGNTSVLAAVYGPAPAKSLRMERSEGATLDVSFKPESGITSSADAESEALLRRSLEEVVLRSRYPRTVVSVIIQVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCIT----ATVSGRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCHAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAETVR 230          
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Match: A0A835ZF16_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF16_9STRA)

HSP 1 Score: 196 bits (497), Expect = 3.790e-59
Identity = 117/233 (50.21%), Postives = 158/233 (67.81%), Query Frame = 0
Query:    6 DGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAKSLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRCVVSVVVQVIVDDGAVLSAALNASTMALLNAGVEMTGMALSVTCCITGAATASA--------LGRSVI-LDPCKAEESEAAATAVVATLAASGGVLSCRAVGAMSQEEYFACCEAAAQGTTAVRSFVRMSAEQKVLREV 229
            DGR  +QIR L  +QGILNRADGS RF  GNTSVL A+YGPA     + +K D A ++VS+R + G  +SADAER + +RR+LEE +  +RYPR V+SVVVQV+ DDG+VLSAA+NA  MAL++AGVEM GM ++ T C +G+ +A+A        LG S + LDP  +EE+   AT ++A LA S G+L+ +  G +  EE FA  EAA +   AV  ++R + E KVLR+V
Sbjct:    8 DGRTGDQIRGLFADQGILNRADGSVRFGAGNTSVLVAVYGPAQPAQQKKEKPDRAIIEVSWRADKGAQTSADAERELYVRRTLEEAVAVARYPRSVISVVVQVLCDDGSVLSAAINACAMALVDAGVEMIGMPVAATACFSGSGSAAAAAPEQLQHLGESHLQLDPSASEEATTRATVMLAVLAGSDGILTMKMTGQLGAEELFAASEAARKACDAVSVYLRRAVEAKVLRDV 240          
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Match: A0A067CJ13_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJ13_SAPPC)

HSP 1 Score: 170 bits (431), Expect = 1.870e-49
Identity = 101/221 (45.70%), Postives = 140/221 (63.35%), Query Frame = 0
Query:    4 RRDGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAKSLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRCVVSVVVQVIVDDGAVLSAALNASTMALLNAGVEMTGMALSVTCCITGAATASALGRSVILDPCKAEESEAAATAVVATLAASGGVLSCRAVGAMSQEEYFACCEAAAQGTTAVRSFVRMSAEQK 224
            R DGR   +IRPLA EQG+LNRADGSARF  G TSVLA++ GPA AK  R +K  GAT++V+F+ E G  S+ D E  ++LR + E +IV   +PR VVS+ VQV+ DDGA+L+ A+NA  +AL++AGV M  +  ++TC I            + LDP ++E   AAAT   A    + G+L+    G +S+E+YFAC E   +   +V +FVR+S E K
Sbjct:    7 REDGRLVQEIRPLACEQGLLNRADGSARFNHGTTSVLASVSGPAAAKLRRQEKATGATLEVTFKAEKGAPSARDKEYEMILRETFEPIIVLENFPRAVVSITVQVVEDDGALLAVAINAVNLALIDAGVPMRSIVGAITCSILE-------DGQLCLDPSRSEGETAAATVTTACCGNNDGILTSMTSGVLSEEQYFACSEICRRAIDSVLAFVRISQESK 220          
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Match: A0A1V9ZII6_9STRA (Exosome component Rrp46 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZII6_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.750e-47
Identity = 100/221 (45.25%), Postives = 141/221 (63.80%), Query Frame = 0
Query:    4 RRDGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAKSLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRCVVSVVVQVIVDDGAVLSAALNASTMALLNAGVEMTGMALSVTCCITGAATASALGRSVILDPCKAEESEAAATAVVATLAASGGVLSCRAVGAMSQEEYFACCEAAAQGTTAVRSFVRMSAEQK 224
            R DGR   +IRPLA EQG+LNRADGS+RF  G TSVLA++ GPA AK  R +K   AT++V F+ E G +S+ D E  ++LR++ E +I+   +PR V+SV VQV+ DDGA+L+ A+NA  +ALL+AGV M G+  ++TC I            + LDP  +E   AAAT   A+   S GVL+    G +++ +YFAC E   +G  +V +FVR++ E K
Sbjct:    8 REDGRLVQEIRPLACEQGLLNRADGSSRFNHGTTSVLASVSGPAAAKLRRQEKMHCATLEVVFKPEKGAASARDKEYEMILRQTFEPIILLENFPRAVISVTVQVVEDDGALLAVAINAVNLALLDAGVPMRGIVGAITCTILE-------DGQLCLDPSLSEGEAAAATVTTASCGNSDGVLTSMTSGVLTEAQYFACSEICRRGIDSVLAFVRIAQETK 221          
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Match: A0A485KL27_9STRA (Aste57867_8748 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KL27_9STRA)

HSP 1 Score: 164 bits (416), Expect = 3.710e-47
Identity = 100/228 (43.86%), Postives = 140/228 (61.40%), Query Frame = 0
Query:    4 RRDGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAKSLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRCVVSVVVQVIVDDGAVLSAALNASTMALLNAGVEMTGMALSVTCCITGAATASAL-GRSVILDPCKAEESEAAATAVVATLAASGGVLSCRAVGAMSQEEYFACCEAAAQGTTAVRSFVRMSAEQKVLREVE 230
            R DGR   +IRPL+ EQG+LNRADGSARF  G TSVLA++ GPA AK  R +K D AT++V F+ E G  ++ D E   +LR++ E ++    YPR V+S+ VQV+ DDG++L+ A+NA  +ALL+AG+ M         C+ GA T S L    + LDP + E   AAAT   A    + G+L+    G +S+ +YFAC E   +   +V SFVR+S E K  + +E
Sbjct:    8 RGDGRLVQEIRPLSCEQGLLNRADGSARFSHGTTSVLASVNGPAAAKIRRQEKVDEATLEVVFKAEKGAPTARDKEYEAILRQTFEPIVYLENYPRAVISITVQVVEDDGSLLAVAINAVNLALLDAGIPMR--------CLVGAITCSILEDGQLCLDPARVEGETAAATVTSACAGNNDGILTSLTTGMLSESQYFACSEICRRAVDSVLSFVRISQETKFQKALE 227          
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Match: A0A6G0WBP6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBP6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.950e-41
Identity = 94/222 (42.34%), Postives = 132/222 (59.46%), Query Frame = 0
Query:    4 RRDGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAKSLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRCVVSVVVQVIVDDGAVLSAALNASTMALLNAGVEMTGMALSVTCCITGAATASALGRSVILDPCKAEESEAAATAVVATLAASG-GVLSCRAVGAMSQEEYFACCEAAAQGTTAVRSFVRMSAEQK 224
            R DGR   +IRPL+ EQ +LNRADGSARF  G +SVLA++ GPA AK  R +K   A+++V+F+ E G  ++ D E   +LR++ E +I    +PR V+SV VQV+ DDG++LS A+NA  +ALL+AG+ M         C+ GA T S L            E EAA  +V +  A +  G+L+    G +S+  YFAC E   +   +V SFVR+S E K
Sbjct:    9 REDGRLVQEIRPLSCEQSLLNRADGSARFSHGTSSVLASVNGPAAAKIRRQEKVSCASLEVTFKAEKGAPTARDKEYEAILRQTFEPIIYLENFPRAVISVTVQVVEDDGSLLSVAINAMNLALLDAGIPMR--------CLVGAVTCSILDDGQFCLDSSLTEGEAAVASVTSACAGNNDGILTSLTTGVLSESHYFACSEICRRAVGSVLSFVRISQETK 222          
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Match: A0A024TBK6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TBK6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.010e-41
Identity = 89/221 (40.27%), Postives = 134/221 (60.63%), Query Frame = 0
Query:    4 RRDGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAKSLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRCVVSVVVQVIVDDGAVLSAALNASTMALLNAGVEMTGMALSVTCCITGAATASALGRSVILDPCKAEESEAAATAVVATLAASGGVLSCRAVGAMSQEEYFACCEAAAQGTTAVRSFVRMSAEQK 224
            R DGR   +IRPL+ EQG+LNRADGSARF  G+TSVLA++ GPA AK  R +K D ATV+V F+ + G  ++ D E   +L+++ + ++    YPR V+S+ VQV+ DDG++L+ A+NA  +ALL+AG+ M  +  ++TC I            + LDP   E   A A+   A    + G+L+    G +++ +YFA  E   +   +V SFVR++ E K
Sbjct:   10 RDDGRLVQEIRPLSCEQGLLNRADGSARFCHGSTSVLASVNGPAAAKIRRHEKVDAATVEVVFKSDKGAPTARDKEYEAILKQTFDPIVYVENYPRAVISITVQVVEDDGSLLAVAINAVNLALLDAGIPMRSLVGAITCSILD-------DGQLCLDPSLTEGDAATASVTAAYAGKNDGILTSITTGLVNESQYFAASEICRRAIDSVLSFVRIAQESK 223          
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Match: A0A1V9ZVY3_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVY3_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.500e-39
Identity = 94/225 (41.78%), Postives = 140/225 (62.22%), Query Frame = 0
Query:    1 MAGRRDGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAKSLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRCVVSVVVQVIVDDGAVLSAALNASTMALLNAGVEMTGMALSVTCCITGAATASALGRSVI-LDPCKAEESEAAATAVVATLAASGGVLSCRAVGAMSQEEYFACCEAAAQGTTAVRSFVRMSAEQK 224
            M  R DGR+  +IRPLA EQG+LNRADGSARF  G TSV+A++ GPA AK  R +  + AT+DV F+ E G +++ D E  ++LR++ E +I+   +PR V+S+ VQV+ DDG++L+ ++NA  +AL++AG+ M          + GA T S L  S + +DP   E   A AT   A  A +  +L+    G +++E+YFAC E   +   +V +FVR+S E K
Sbjct:  501 MDKREDGRSVQEIRPLACEQGLLNRADGSARFNHGTTSVMASVSGPAPAKIRRQENVNQATLDVVFKAEKGVATARDKEYELILRQTFEPIILLENFPRTVISITVQVVEDDGSLLAVSINAINLALMDAGIPMRS--------VVGAITCSVLEDSQLCIDPSLVENDTATATVTTACSANNHQILTSFTSGILTEEQYFACSEICRRAIDSVIAFVRISQESK 717          
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Match: A0A833WKX0_PHYIN (3' exoribonuclease family domain 2 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WKX0_PHYIN)

HSP 1 Score: 145 bits (367), Expect = 1.630e-39
Identity = 90/229 (39.30%), Postives = 140/229 (61.14%), Query Frame = 0
Query:    4 RRDGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAKSLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRCVVSVVVQVIVDDGAV--------LSAALNASTMALLNAGVEMTGMALSVTCCITGAATASALGRSVILDPCKAEESEAAATAVVATLAASGGVLSCRAVGAMSQEEYFACCEAAAQGTTAVRSFVRMSAEQK 224
            R+DGR  N++RP A EQG L RADGSAR   G+++VLAA+YGP  A++ R +  D AT+DV F+ E G  +S + E   ++R++   V++   +PR V+S+VVQVI D+G++         + A+NA ++AL++AGV M  +  + +C I           ++ LDP  AEE EA +    A  + S GVL+C   G +S+E+YFAC EA  + + +V +F R+  ++K
Sbjct:   22 RQDGRAGNELRPFASEQGALFRADGSARMSHGSSTVLAAVYGPGQARNWRAENTDKATLDVCFKLEKGIMTSKEKEYEQIIRQTFAPVVLTDSFPRAVISIVVQVIEDNGSISFPLFLIIAALAINAVSLALMDAGVPMLSVVTATSCSIFD-------DGNLYLDPTAAEEEEAVSWVTTARSSTSDGVLTCITNGLLSEEQYFACSEACQRASESVAAFFRIVQQKK 243          
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Match: A0A151ZDL9_9MYCE (RNase_PH domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZDL9_9MYCE)

HSP 1 Score: 141 bits (356), Expect = 4.540e-38
Identity = 83/228 (36.40%), Postives = 137/228 (60.09%), Query Frame = 0
Query:    4 RRDGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAKSLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRCVVSVVVQVIVDDGAVLSAALNASTMALLNAGVEMTGMALSVTCCITGAATASALGRSVILDPCKAEESEAAATAVVATLAASGGVLSCRAVGAMSQEEYFACCEAAAQGTTAVRSFVRMSAEQKVLREVET 231
            R DGR  NQIR    EQ +LN+ADGSARF Q  +SVLAA+YGP   K+ R QK   + ++VSF    G ++  D E+ +L++ +LE +I+ + +PR  +S++ QV  DDG+++S A+NA+ +ALL+AG+EM G+  SVT C           +S+ LDP   EE E  + +V+A  + S  ++  +  G +S + YF     + +    V S+++++ + +++  + T
Sbjct:    5 RNDGRLNNQIRAFESEQSLLNKADGSARFTQNKSSVLAAVYGPIEVKNSRKQKILKSLIEVSFTPSVGNTTYLDKEKELLIKNALESIILTTLHPRTQISIIFQVFSDDGSIISCAINAACLALLDAGIEMQGLIGSVTLCYNH-------DKSIYLDPTAQEEKECKSLSVIAYGSQSSQIIMNKTEGTLSMDLYFKSLPLSKEACDKVISYIKLAVKNRIMGTIST 225          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1235.1778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVT2_ECTSI1.160e-11582.17RNase_PH domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZF16_9STRA3.790e-5950.21Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A067CJ13_SAPPC1.870e-4945.70Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZII6_9STRA1.750e-4745.25Exosome component Rrp46 n=1 Tax=Achlya hypogyna Ta... [more]
A0A485KL27_9STRA3.710e-4743.86Aste57867_8748 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0WBP6_9STRA1.950e-4142.34Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024TBK6_9STRA2.010e-4140.27Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A1V9ZVY3_9STRA1.500e-3941.78U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax... [more]
A0A833WKX0_PHYIN1.630e-3939.303' exoribonuclease family domain 2 n=1 Tax=Phytoph... [more]
A0A151ZDL9_9MYCE4.540e-3836.40RNase_PH domain-containing protein n=1 Tax=Tieghem... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 3..231
e-value: 3.5E-54
score: 185.7
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 12..133
e-value: 9.4E-23
score: 81.2
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 4..225
NoneNo IPR availablePANTHERPTHR11953:SF1EXOSOME COMPLEX COMPONENT RRP46coord: 4..225
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 4..168
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 134..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1235contigF-serratus_M_contig1235:123331..136099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1235.1778.1mRNA_F-serratus_M_contig1235.1778.1Fucus serratus malemRNAF-serratus_M_contig1235 123247..136184 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1235.1778.1 ID=prot_F-serratus_M_contig1235.1778.1|Name=mRNA_F-serratus_M_contig1235.1778.1|organism=Fucus serratus male|type=polypeptide|length=234bp
MAGRRDGRNANQIRPLAVEQGILNRADGSARFVQGNTSVLAAIYGPATAK
SLRMQKHDGATVDVSFRRESGQSSSADAERAILLRRSLEEVIVRSRYPRC
VVSVVVQVIVDDGAVLSAALNASTMALLNAGVEMTGMALSVTCCITGAAT
ASALGRSVILDPCKAEESEAAATAVVATLAASGGVLSCRAVGAMSQEEYF
ACCEAAAQGTTAVRSFVRMSAEQKVLREVETVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR020568Ribosomal_S5_D2-typ_fold
IPR036345ExoRNase_PH_dom2_sf