prot_F-serratus_M_contig123.1753.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig123.1753.1
Unique Nameprot_F-serratus_M_contig123.1753.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length203
Homology
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BLAST of mRNA_F-serratus_M_contig123.1753.1 vs. uniprot
Match: A0A6H5JAB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAB6_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.320e-18
Identity = 44/127 (34.65%), Postives = 77/127 (60.63%), Query Frame = 0 
Query:   40 TVSLSQYVRIDASGRPNASPERTFSQVTTSGYHTLSLNSFRGETYDGALLFVTFNVNKFSYQSIEEVDPVDLATLLGSAGGMWEIICAVFAVLFVASQGTRPDKIWVFRKTAGQRTPNSAVNQNQAG 166
            T+ L+++V +       ++ ER ++QVTT+G  +L L++   + + GA+LF TF++N+FS+Q++EE DP    +++G+AGGM  I+ A+F +LF  S+   P +IW F +   +R          AG
Sbjct:   31 TLELAEHVLLQPDEVTGSTTERGYTQVTTTGQQSLQLDN--ADPFSGAILFATFSINEFSFQTVEEYDPSHYPSMVGAAGGMLAIVYALFGLLFAPSRSPGPRRIWRFSRRRRKRRSKLDFRPADAG 155
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BLAST of mRNA_F-serratus_M_contig123.1753.1 vs. uniprot
Match: D8LIE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE9_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 6.860e-17
Identity = 52/166 (31.33%), Postives = 87/166 (52.41%), Query Frame = 0 
Query:    5 DDEIPLNETVVS-ARLPYERVNITGT---EPFTLLSNDMTVSLSQYVRIDASGRPNASPERTFSQVTTSGYHTLSLNSFRGETYDGALLFVTFNVNKFSYQSIEEVDPVDLATLLGSAGGMWEIICAVFAVLFVASQGTRPDKIWVFRKTAGQRTPNSAVNQNQAG 166
            DD++     V + ARLPY+R+++  T   E  T++SND+                          VTT+G  +L  ++   + + GA+LF TF++N+FS+Q++EE+D  D  +++G+AGGM  I+ A+F +LF  S+   P +IW F +   +R          AG
Sbjct:  140 DDDLDSENAVATLARLPYDRISVDATNASESITVVSNDV--------------------------VTTTGQQSLQFDN--ADPFSGAILFATFSINEFSFQTVEELDTSDYVSMVGAAGGMLVIVYALFGLLFAPSRSPGPRRIWRFSQRRRRRRSKLDFRPADAG 277
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig123.1753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAB6_9PHAE1.320e-1834.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIE9_ECTSI6.860e-1731.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig123contigF-serratus_M_contig123:364774..369287 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig123.1753.1mRNA_F-serratus_M_contig123.1753.1Fucus serratus malemRNAF-serratus_M_contig123 364646..369629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig123.1753.1 ID=prot_F-serratus_M_contig123.1753.1|Name=mRNA_F-serratus_M_contig123.1753.1|organism=Fucus serratus male|type=polypeptide|length=203bp
MFFVDDEIPLNETVVSARLPYERVNITGTEPFTLLSNDMTVSLSQYVRID
ASGRPNASPERTFSQVTTSGYHTLSLNSFRGETYDGALLFVTFNVNKFSY
QSIEEVDPVDLATLLGSAGGMWEIICAVFAVLFVASQGTRPDKIWVFRKT
AGQRTPNSAVNQNQAGTCLGCYCLHRVKARALPRRRAPVTSFRDDHHSAT
FS*
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