prot_F-serratus_M_contig1227.1727.1 (polypeptide) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1227.1727.1 vs. uniprot
Match: D7FMK4_ECTSI (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMK4_ECTSI) HSP 1 Score: 615 bits (1585), Expect = 4.800e-198 Identity = 461/1106 (41.68%), Postives = 589/1106 (53.25%), Query Frame = 0
Query: 3 VHAREGETITAPTANARQKRYLYEVVQKAMDKAMDNKDATDGRSHDHELGPNPLLAAYQVCHDLCSSMVLEILHGQAQKLSARIGGFWATHLVVVFHKEAQASFQFCFCSQYVLDLCFWHREFSTGLAGTGREVGIGGVRALNGDGSLLHHPSEGEPAANLPPPPSGCRYIRVHRPVDRKRQQMVASLGPAAELQTTEKLESGRGNGGIEGKKADLDDVSVNGGAVHVRADKLSCARLLLVATRMFASQKIDALASDVKSLAHQLGISNKFIGVTILGGLTARISSSNQNGALDVWLEVSVDARSGRYLVKDSGFATRKLGTVNFISRLEEALNLLPGSDSQSLGEKVTMALSTGG---REPNVKNGSIHGGQQQDLRQQQVRRCMAECFGVLRRTEIEDILRRGLGLVPHQRWQALLGRRNAERRNV---IPAIGWNAESVFRNATYSLIQQFREY-----EGCRXXXXXXXXXXXXXXXXXXXXXXXXXXVGTMSTLTLPEAKRVATTASP-PGDVTEPSRGAVGPPLLTSSVVPDLHHVGPGVLPTVAASMMKDSNRGEGSTTQPPRAVPTCSLRGCQLGRETSEVLSFFLEIGITENLELEHTLLVAGLPTTATGPGRYSLRRSVRETYTL-DVQVNPGTGRGSY----LPTGTPTTDSQQFALLGKRSASFMESGQVERSVG--SGLTTDEAIPTLSPGKGLVTPEGTEAELHKVVSMAKRFIPFARLQHVVLRLSVGTALSLDIQGLARSLESPVGPLSCAVDLFLGGKEGWSSPEVAAEAASVKFYGGHVEAECWEWDVTLGPGTMLMDY----SGPDHGVGEAGIALELVKKELPLIENTFVGALKAPGDAMGMEHCGKSLGKHIKFRFPPLFSIRAMCRSFALSGEGLAVMRTLAAQAIELQRSQGCGSGGGYSVLSCSPIHVAMHDPLSDHVVVLTHSAFLVEHITSQERPGLVLMPLSDDVPTCPAAIQELQAAVSKHGDLRALLHGLSRTIPVLMAVSRVVPGVASVAGAPGSFGFGRSYSSAEGEFVLEPVSPACFVLS----ARSKPETRPPLTLLIEAGGHVRVTGLVDRKEDAVVNTSVLQDLLLEWIAT 1081
V AREGE+ITAP + RQ+RYL+EV+QKAMD D D PN LLAAYQVCHDLC SMVLEILH QAQKL+ R+GG WA L V+FHK++Q +VA+LGP E L S G+ + + S+ +V + DKLSCAR+LL A R+FASQK++ LA+DV+S A QLG VT +GGL+A I G +EVSVD +SGRYLVKD+ K + ISRL EALNLLP +DSQSLGE + LS G ++ ++ G+Q DLRQQ VRRCM E FG+LRR E+E R G+VPH RWQALLGR +A + P + + R++ + QFRE E R +G + T A +A P GD++ S G L +++ L V G + S ++RG GS +A S G L ET EVLSFFLE+ IT NL++EHT++ A LPT G R SLR V ETY L Q G+ GS LP+ P A+ KRSAS +++G + ++G +G+ TL G V E ++ +L V M RF+PFARLQH +LR VGT LSLD + L + CAV FL G+ GWSSPEVAA +A V F+ GH +A+ WEWDVTLGP T LMD+ D G A + +V ++LPL ++ + ++ G + GKH++FRFPP FS+ AMCRSFAL+GEGL VM+TLAAQA +L R GC GYSV+SCSPIHVAM D DHVV+LTHSAF HI+S +RPGLVL+P PTCPAA++EL+A+V KH DL ALLHGLSRT+PVL VSRV+PGV S AG G S + GEFVL V+PA FVLS + +++P LTL +EAGG VRV+ ++D V +T L+ LLLEWIA+
Sbjct: 232 VQAREGESITAPVRDFRQQRYLHEVIQKAMDVHADG---------DANPRPNALLAAYQVCHDLCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQ----------------------------------------------------------------------------------IVAALGPPGEFLEGRGLGSDVGDHSVTTDEETSAVDSLLTSSVQIYPDKLSCARMLLAAARIFASQKVNTLAADVESYAAQLGACVP--RVTTVGGLSAYICPWGGGG-----VEVSVDVKSGRYLVKDTLPGGGK-AMASCISRLREALNLLPLTDSQSLGESIASTLSAGRSVLQKRSIPTQRARNGEQ-DLRQQHVRRCMGESFGLLRRGELEHTFRCAFGVVPHLRWQALLGRTDANAIDAGTEFPRL--DGSDTLRSSVR--LGQFRENGVLLSEAWRKRTRNFRILRRGTSAIELTRAERAATIGQVPTAASAGAGFRLNSAPPLDGDLSCSSGWQQGGGTLPAALAASLAEVSDGGDDMASRSTRWRTDRGVGSGANGVKA----SSEGNVL-EETGEVLSFFLEVDITGNLDVEHTVVSATLPTA--GRARKSLRPVVGETYKLFPCQPLSGSRCGSLDADLLPSKPPP------AVGTKRSASCLDAGYSQGAIGITTGVHDGLCPTTLHAAVGTVG-EASQTQLCTAVQMCNRFVPFARLQHALLR--VGTGLSLDFRELTHFSGATQQVPHCAV--FLAGEHGWSSPEVAASSARVSFFPGHTQADTWEWDVTLGPTTSLMDFIWAVPAKDEDKGLA-VTRGIVHEQLPLAQHIEILGVRQEG-IESSSTTRMAQGKHVRFRFPPPFSVHAMCRSFALAGEGLTVMQTLAAQASKL-RQTGC-EAAGYSVVSCSPIHVAMRDSKLDHVVLLTHSAFSSRHISSADRPGLVLIPWPH-APTCPAAMRELEASVRKHRDLNALLHGLSRTVPVLAEVSRVLPGVGSAAGMNGD------RSPSRGEFVLTAVTPARFVLSKSPLGERRLQSKPALTLAVEAGGQVRVS--TPGRKDVVADTGALRRLLLEWIAS 1202
BLAST of mRNA_F-serratus_M_contig1227.1727.1 vs. uniprot
Match: A0A836CA29_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA29_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 3.110e-10 Identity = 107/379 (28.23%), Postives = 141/379 (37.20%), Query Frame = 0
Query: 55 PLLAAYQVCHDLCSSMVLEILHGQAQKLSARIGGFWATHLVVVFHKEAQASFQFCFCSQYVLDLCFWHREFSTGLAGTGREVGIGGVRALNGDGSLLHHPSEGEPAANLPPPPSGCRYIRVH--RPVDRKRQQMVA-SLGPAAELQTTEKLESGRGNGGIEGKKADLDDVSVNGGAVHVRADKLSCARLLLVATRMFASQKIDALASDVKSLAH--QLGISNKFIGVTI---LGGLTARISSSNQNGALDVWLEVSVDARSGRYLVKDSGFATRKLGTVNFISRLEEALNLLPGSDSQSLGEKVTMALSTGGREPNVKNGSIHGGQQQDLRQQQVRRCMAECFGVLRRTEI---EDILRRGLGLVPHQRWQALLGRRNA 422
PLL AY++ HD C LE+L QAQ L AR G W L V + A+ VLD+ W +E+ L + P G P +PPP G R+IRVH RP + + LGP A TE A+H+ A LS +RL+ A R F +K+ LA DV + G GV GG R+++ GALD+ + D R+GR +V S A + + L EAL L PG+ ++ + M LR A LR + E GLGL P RW ALLGR A
Sbjct: 339 PLLTAYRLAHDFCMGAQLELLSVQAQAL-ARPGAPWHGCLRAVLDRAAR-----------VLDIIVWEQEYGPALP------------------TAAPPPPRGAPVNGVPPPAQG-RFIRVHVQRPETADAEAHIRIQLGPGAAEAATE-------------------------AALHIDAAALSASRLVRDAVRTFTRRKLAVLAPDVAAALRGAPAGGXXXXSGVRARLHAGGRALRVAARG-GGALDI----AADLRTGRCVVL-SERAEARPDASGAHAALLEALALPPGAAGRAHAQGRAM-----------------------LR--------ARLMAALRMAALDAAEAAAACGLGLEPQWRWGALLGRGGA 624 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1227.1727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-serratus_M_contig1227.1727.1 ID=prot_F-serratus_M_contig1227.1727.1|Name=mRNA_F-serratus_M_contig1227.1727.1|organism=Fucus serratus male|type=polypeptide|length=1085bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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