prot_F-serratus_M_contig1226.1725.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1226.1725.1
Unique Nameprot_F-serratus_M_contig1226.1725.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length107
Homology
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BLAST of mRNA_F-serratus_M_contig1226.1725.1 vs. uniprot
Match: D8LD88_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD88_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 9.680e-13
Identity = 58/124 (46.77%), Postives = 65/124 (52.42%), Query Frame = 0 
Query:    1 MNFVAGSLLLACSTRDPAV-------TEGPRGVAGDGGSVS---------DXGHGDTGGSCGGVSGARGDGERDVVDAVMESEQPRDEEFEESGEDEKQ-EWRSSPAHLRAEKDVFWLMMALTS 107
            MNFVAGSLLLAC+TRDPAV        +  R V GD              D G GD       VS          +     S     ++F+ SGEDE Q EWRS PAHLRAEKDVFWLM+ALTS
Sbjct:  245 MNFVAGSLLLACATRDPAVGAPCYPNCDRRRSVRGDSSXXXXXXXXXXXXDGGDGD-------VSPFVATATSMALSPTSASAWEEWDDFDGSGEDESQPEWRSGPAHLRAEKDVFWLMLALTS 361
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1226.1725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD88_ECTSI9.680e-1346.77Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..107
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1226contigF-serratus_M_contig1226:176732..178185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1226.1725.1mRNA_F-serratus_M_contig1226.1725.1Fucus serratus malemRNAF-serratus_M_contig1226 176732..178185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1226.1725.1 ID=prot_F-serratus_M_contig1226.1725.1|Name=mRNA_F-serratus_M_contig1226.1725.1|organism=Fucus serratus male|type=polypeptide|length=107bp
MNFVAGSLLLACSTRDPAVTEGPRGVAGDGGSVSDGGHGDTGGSCGGVSG
ARGDGERDVVDAVMESEQPRDEEFEESGEDEKQEWRSSPAHLRAEKDVFW
LMMALTS
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