prot_F-serratus_M_contig122.1710.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig122.1710.1
Unique Name	prot_F-serratus_M_contig122.1710.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	98

Homology

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BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 5.450e-33
Identity = 62/93 (66.67%), Postives = 79/93 (84.95%), Query Frame = 0

Query:    6 LLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAWISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMILA 98
            +LLAGVVVFI+PNTAAQIA TL +A  F+ VSE LAP+ S+WDAW++R+GH +VFV++Y+ALLLKVDVSGE   SQ+ +E+V+VA H CMILA
Sbjct: 1132 VLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILA 1224

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BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.030e-32
Identity = 65/92 (70.65%), Postives = 75/92 (81.52%), Query Frame = 0

Query:    6 LLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAWISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMIL 97
            +LLAGVVVFIYPNTA QIA TL +A  F+ VSE LAPY S+WD W+SR GHA+VFV++YVALLLKVDVS E   SQ+ FEVV+VA H CMIL
Sbjct: 1943 VLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMIL 2034

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BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Match: A0A6H5KP34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP34_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.670e-31
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    6 LLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAWISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMILA 98
            +LL G+VVF+YPNTAAQIA TL +  VF  +SEAL P    WD W+SR  HA+VF+++YVALLLKVDVS E  SSQK FE V+VA H CM+LA
Sbjct:   32 ILLTGLVVFMYPNTAAQIAITLIMTVVFAVLSEALHPNAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSDEKRSSQKVFEAVLVAAHACMVLA 124

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BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 7.900e-31
Identity = 65/92 (70.65%), Postives = 74/92 (80.43%), Query Frame = 0

Query:    6 LLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAWISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMIL 97
            +LLAGVVVFIYPNTAAQIA TL IA  F  +SE LAPY S+WD WISR GH +VF+++YVALLLKVDVS E  SSQ+ FE V+VA H CMIL
Sbjct: 1388 VLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMIL 1479

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BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Match: D8LH65_ECTSI (Polymorphic outer membrane protein G/I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH65_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 9.360e-31
Identity = 61/92 (66.30%), Postives = 76/92 (82.61%), Query Frame = 0

Query:    6 LLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAWISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMIL 97
            +LLAGVVVFIYP+TAAQIA TL IA  F+ VSE L+PY S+WD W++R GH +VFV+++VALLLKVDV+ E+ SSQK FE V+VA H CM+L
Sbjct:  574 VLLAGVVVFIYPDTAAQIAVTLMIAFAFVIVSEVLSPYSSKWDRWVNRMGHVVVFVSMFVALLLKVDVADEDASSQKVFESVLVAAHVCMVL 665

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BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.070e-30
Identity = 62/93 (66.67%), Postives = 72/93 (77.42%), Query Frame = 0

Query:    6 LLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAWISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMILA 98
            +LL G+VVFIYPNTAAQIA TL +  VF  +SEAL PY   WD W+SR  HA+VF+++YVALLLKVDVS E  SSQK FE V+VA H CMILA
Sbjct:  893 ILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILA 985

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BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.090e-30
Identity = 62/93 (66.67%), Postives = 72/93 (77.42%), Query Frame = 0

Query:    6 LLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAWISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMILA 98
            +LL G+VVFIYPNTAAQIA TL +  VF  +SEAL PY   WD W+SR  HA+VF+++YVALLLKVDVS E  SSQK FE V+VA H CMILA
Sbjct: 2631 ILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILA 2723

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BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 1.980e-30
Identity = 62/91 (68.13%), Postives = 73/91 (80.22%), Query Frame = 0

Query:    6 LLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAWISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMI 96
            +LLAGVVVFIYPNTAAQIA  L IA VF  +SEALAPY S+WD W+ R GHA+V V++YVALLLKVDVS E  SSQ+ FE ++VA H CM+
Sbjct:  853 VLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMV 943

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BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Match: A0A6H5K3R8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3R8_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 5.240e-28
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0

Query:    6 LLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAWISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMI 96
            +L AGVVVFIYPNTAAQIA  L +A VF  +SE +APY S+WD W+ R GHA+V V++YVALLLKVDVS E  SSQ+ FE + VA H CM+
Sbjct:  571 VLRAGVVVFIYPNTAAQIAVALPMAVVFAMISEPVAPYVSRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLFVAAHVCMV 661

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BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 7.370e-28
Identity = 58/93 (62.37%), Postives = 74/93 (79.57%), Query Frame = 0

Query:    6 LLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAWISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMILA 98
            +LLAGVVVFIYPNTAAQIA TL IA  F+ VSEAL PY S WD WI+R GH +VF ++++ LLLKV+VS E+ +SQ+ FE+V+VA H  M++A
Sbjct: 1499 VLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMA 1591

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig122.1710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G301_ECTSI	5.450e-33	66.67	Polymorphic Outer membrane protein G/I family n=1 ...	[more]
D7G5Y7_ECTSI	1.030e-32	70.65	Polymorphic Outer membrane protein G/I family n=1 ...	[more]
A0A6H5KP34_9PHAE	1.670e-31	63.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0E9_9PHAE	7.900e-31	70.65	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LH65_ECTSI	9.360e-31	66.30	Polymorphic outer membrane protein G/I family prot...	[more]
D7FHH1_ECTSI	1.070e-30	66.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FHG7_ECTSI	1.090e-30	66.67	LNR domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7G2Z8_ECTSI	1.980e-30	68.13	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K3R8_9PHAE	5.240e-28	63.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FTI5_ECTSI	7.370e-28	62.37	Polymorphic outer membrane protein n=1 Tax=Ectocar...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..30
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 74..98
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 31..53
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 54..73
None	No IPR available	TMHMM	TMhelix		coord: 12..34
None	No IPR available	TMHMM	TMhelix		coord: 49..71

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig122	contig	F-serratus_M_contig122:472810..473103 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig122.1710.1	mRNA_F-serratus_M_contig122.1710.1	Fucus serratus male	mRNA	F-serratus_M_contig122 472729..473103 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig122.1710.1 ID=prot_F-serratus_M_contig122.1710.1|Name=mRNA_F-serratus_M_contig122.1710.1|organism=Fucus serratus male|type=polypeptide|length=98bp
MWPPYLLLAGVVVFIYPNTAAQIAATLAIATVFIFVSEALAPYYSQWDAW
ISRSGHAIVFVTIYVALLLKVDVSGENTSSQKTFEVVIVAGHGCMILA