prot_F-serratus_M_contig121.1639.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig121.1639.1
Unique Nameprot_F-serratus_M_contig121.1639.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length284
Homology
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BLAST of mRNA_F-serratus_M_contig121.1639.1 vs. uniprot
Match: A0A6H5JYH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYH5_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 3.850e-28
Identity = 68/154 (44.16%), Postives = 91/154 (59.09%), Query Frame = 0 
Query:    2 TNVQDILRVVALSGLIRPEEVDLVCLNVCNACRES-VRYAITVNIHNAPN-SLSPKYDSGTRSE--------------------RRTRLKHVRRISRLNFRMNVPLTEIVWPDDLHELKFGWVFNQPLESALPSSLLSLELGGSFNHHVEEVIW 133
            T    +LRVV LSG++ P EV+LVCL++CNACRES   Y++ V   N    S S + D G  S                       +R+   RRISRL FR+++PL+++VWP+ L  LKFGW F+ PL+  LP SL+ L LGG+FNHH+E V W
Sbjct:    4 TRAAGVLRVVVLSGVVWPAEVELVCLSICNACRESSTNYSMVVTAKNVRLVSPSRRQDEGGASSPLPLCGGDINSDSAVPVIPAENSRVLPHRRISRLAFRVDLPLSQVVWPEGLRGLKFGWRFDHPLDHPLPDSLIDLHLGGTFNHHIEGVTW 157
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig121.1639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JYH5_9PHAE3.850e-2844.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 103..143
e-value: 3.7E-6
score: 27.0
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 77..170
coord: 201..253
coord: 134..214
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 201..253
coord: 134..214
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 77..170
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 75..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig121contigF-serratus_M_contig121:62931..63782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig121.1639.1mRNA_F-serratus_M_contig121.1639.1Fucus serratus malemRNAF-serratus_M_contig121 62931..63782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig121.1639.1 ID=prot_F-serratus_M_contig121.1639.1|Name=mRNA_F-serratus_M_contig121.1639.1|organism=Fucus serratus male|type=polypeptide|length=284bp
MTNVQDILRVVALSGLIRPEEVDLVCLNVCNACRESVRYAITVNIHNAPN
SLSPKYDSGTRSERRTRLKHVRRISRLNFRMNVPLTEIVWPDDLHELKFG
WVFNQPLESALPSSLLSLELGGSFNHHVEEVIWPSQLVKLRFGVRFNRPI
ELAAWPLTLRSLTFGLSFNQPIEMVKWPTALEYLALGDAFNHPVKATAWR
ATNLKKLEFGMAFRHPIDGMAWPEDLETLKLGACFDQALDSQELPRGLKV
LHLPDLYEMDGGDHTFRAGLPSLCKIEIHDVVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP