prot_F-serratus_M_contig120.1597.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig120.1597.1
Unique Nameprot_F-serratus_M_contig120.1597.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length243
Homology
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 3.790e-56
Identity = 109/243 (44.86%), Postives = 148/243 (60.91%), Query Frame = 0
Query:    2 GCHINRNRKTRELKFDQHLYVESMVRRFDVKKEAKIPAASGVLTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVR 243
            GC   R+     LK  Q  Y E +   F V+   +IP   G + LS+ D      + EE+  +P+RE +G+LMW AT TRPDIA AVRA AR+C +P   H +A + I  Y++ T D GIT+  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++   KHIDV+HH +R
Sbjct:   59 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVG-MKLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIR 294          
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 7.710e-56
Identity = 110/243 (45.27%), Postives = 149/243 (61.32%), Query Frame = 0
Query:    2 GCHINRNRKTRELKFDQHLYVESMVRRFDVKKEAKIPAASGVLTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVR 243
            GC   R+     LK  Q  Y E +   F V+   +IP   G L LS+ D      + EE+  +P+RE +G+LMW AT TRPDIA AVRA AR+C +P   H +A + I  Y++ T D GIT+  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHIDV+HH +R
Sbjct:  160 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVG-LKLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIR 395          
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 9.860e-55
Identity = 107/244 (43.85%), Postives = 147/244 (60.25%), Query Frame = 0
Query:    2 GCHINRNRKTRELKFDQHLYVESMVRRFDVK--KEAKIPAASGVLTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLV 242
            GC   R+   R LK  Q  Y + +   F V+  KE   P     L LS+ D      + EE+  +P+RE +G+LMW AT TRP+IA A RA AR+C +P   H +A + I  Y++ T D GIT+G G   GL ME + D+D+ +    RRSVSG  +M  +G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KH DV+HH +
Sbjct:   15 GCVYERDWDARILKISQQTYAQELGMDFGVEYGKEILFPVG---LKLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFI 249          
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 2.260e-54
Identity = 110/243 (45.27%), Postives = 149/243 (61.32%), Query Frame = 0
Query:    2 GCHINRNRKTRELKFDQHLYVESMVRRFDVKKEAKIPAASGVLTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVR 243
            GC   R+     LK  Q  Y E +   F V+   +IP   G L LS+ D      + EE+  +P+RE +G+LMW AT TRPDIA AVRA AR+C +P   H +A + I  Y++ T D GIT+  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHIDV+HH +R
Sbjct:  334 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVG-LKLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIR 569          
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 3.150e-54
Identity = 108/243 (44.44%), Postives = 148/243 (60.91%), Query Frame = 0
Query:    2 GCHINRNRKTRELKFDQHLYVESMVRRFDVKKEAKIPAASGVLTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVR 243
            GC   R+     LK  Q  Y E +   F V+   +IP   G L LS+ D      + EE+  +P+RE +G+LMW AT TRPDIA AVRA AR+C +P   H +A + I  Y++ T + GIT+  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHI V+HH +R
Sbjct:  101 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVG-LKLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHCRAGLGILGYVVRTSELGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIHVRHHFIR 336          
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 3.070e-53
Identity = 105/243 (43.21%), Postives = 144/243 (59.26%), Query Frame = 0
Query:    2 GCHINRNRKTRELKFDQHLYVESMVRRFDVKKEAKIPAASGVLTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVR 243
            GC   RN++T  L   Q  + + +   + V     +P +SGV  LS  D  +   E      FP+RE VG+LMW AT TRPDIA AVRA AR+C +P   H  A M I  Y   T  +GI++  G   G  ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL + VK++LFLRQ+  FM P + +  + VFEDN+GAI+LA N  ++  +KHIDV+HH +R
Sbjct:  184 GCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLR 419          
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 7.660e-53
Identity = 110/243 (45.27%), Postives = 149/243 (61.32%), Query Frame = 0
Query:    2 GCHINRNRKTRELKFDQHLYVESMVRRFDVKKEAKIPAASGVLTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVR 243
            GC   R+     LK  Q  Y E +   F V+   +IP   G L LS+ D      + EE+  +P+RE +G+LMW AT TRPDIA AVRA AR+C +P   H +A + I  Y++ T D GIT+  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHIDV+HH +R
Sbjct:  855 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVG-LKLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIR 1090          
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 9.180e-53
Identity = 105/244 (43.03%), Postives = 144/244 (59.02%), Query Frame = 0
Query:    2 GCHINRNRKTRELKFDQHLYVESMVRRFDVKKEAKIPAASGV-LTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVR 243
            GC   RN++T  L   Q  + + +   + V     +P +SGV L+   ADE  +         FP+RE VG+LMW AT TRPDIA AVRA AR+C +P   H  A M I      T  +GI++  G   GL ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL + VK++LFLRQ+  FM P + +    VFEDN+GAI+LA N  ++  +KHIDV+HH +R
Sbjct:   48 GCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATD--------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPTLVHWNAAMDILGDARRTSHFGISFQRGTVEGLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCNPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLR 283          
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Match: A0A6A3GCN4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GCN4_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.860e-52
Identity = 106/245 (43.27%), Postives = 154/245 (62.86%), Query Frame = 0
Query:    1 MGCHINRNRKTRELKFDQHLYVESMVRRFDVK--KEAKIPAASGVLTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVR 243
            +G  I+ + + R L   Q  Y ES++++F  +  K    P   GV  L+KADEPQ+ E+K +MK  PYR  VG+LM+ A  TRPDI+ AV   +RF ENPG  H  A +K+  YLL TKD GI Y G   G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++ + +    +VGA  ++EDN+GA+ LA N     RTKHID+++H +R
Sbjct:   82 LGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPYLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVHYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIR 323          
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Match: A0A6A3GI70_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GI70_9STRA)

HSP 1 Score: 180 bits (457), Expect = 5.320e-52
Identity = 105/245 (42.86%), Postives = 154/245 (62.86%), Query Frame = 0
Query:    1 MGCHINRNRKTRELKFDQHLYVESMVRRFDVK--KEAKIPAASGVLTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVR 243
            +G  I+ + + R L      Y ES++++F  +  K    P   GV  L+KADEPQ+ E+K +MK  PYR  VG+LM+ A  TRPDI+ AV   +RF ENPG  H  A +K+ +YLL TKD GI Y G   G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++ + +    +VGA  ++EDN+GA+ LA N     RTKHID+++H +R
Sbjct:   34 LGIEIDYDMERRTLGISHKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIR 275          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig120.1597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR24_9PHAE3.790e-5644.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE7.710e-5645.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD60_9PHAE9.860e-5543.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQB8_9PHAE2.260e-5445.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L0Z9_9PHAE3.150e-5444.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE3.070e-5343.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE7.660e-5345.27Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KLT9_9PHAE9.180e-5343.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3GCN4_9STRA3.860e-5243.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3GI70_9STRA5.320e-5242.86Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 64..243
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 64..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig120contigF-serratus_M_contig120:729448..730176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig120.1597.1mRNA_F-serratus_M_contig120.1597.1Fucus serratus malemRNAF-serratus_M_contig120 729430..730176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig120.1597.1 ID=prot_F-serratus_M_contig120.1597.1|Name=mRNA_F-serratus_M_contig120.1597.1|organism=Fucus serratus male|type=polypeptide|length=243bp
MGCHINRNRKTRELKFDQHLYVESMVRRFDVKKEAKIPAASGVLTLSKAD
EPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAAARFCENPGP
AHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSV
SGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEF
MEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like