prot_F-serratus_M_contig12.1572.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig12.1572.1
Unique Nameprot_F-serratus_M_contig12.1572.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length199
Homology
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Match: D7FWG4_ECTSI (Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG4_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 5.910e-82
Identity = 118/140 (84.29%), Postives = 131/140 (93.57%), Query Frame = 0
Query:   59 EGFEEEERALQTGDGARSWSSDTGPFKLVLVVNMELKMGKGKIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 198
            E FEEEERALQ+  GAR+WS D GPFKLVL+VNM+LKMGKGK+VAQCCHATLGNYR+ ER+CPSAL+GWE+MGQAKICVKCPT  EL+DIQAKAQ+AG++NYLVMDAGHTQIA GSRTVLALGPAPVWAFEGISSHLKLM
Sbjct:   23 EEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKVVAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQSAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162          
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Match: A0A836C8I9_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I9_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.350e-50
Identity = 80/127 (62.99%), Postives = 97/127 (76.38%), Query Frame = 0
Query:   72 DGARSWSSDTGPFKLVLVVNMELKMGKGKIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 198
            D  R W+ D GPFKLVLVVN ELKMGKGK+ AQCCHATLG Y+   R+ P+ +K WE + QAKICVKCP  +E++ I+ KA+AAG++ Y+V DAG TQI  GSRTVL +GPAP  AF GI+ HLKLM
Sbjct:   74 DQIRDWTIDDGPFKLVLVVNSELKMGKGKVAAQCCHATLGCYKTARRHAPNCVKSWEYLAQAKICVKCPEESEMWQIREKAEAAGLVTYMVADAGRTQIPSGSRTVLGIGPAPETAFLGITDHLKLM 200          
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Match: A0A7S3MCE7_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCE7_9STRA)

HSP 1 Score: 164 bits (416), Expect = 3.370e-48
Identity = 85/173 (49.13%), Postives = 115/173 (66.47%), Query Frame = 0
Query:   41 SSRLTDLIGRQDKGDSIGEGFEEEERALQTG-----------DGA----RSWSSDTGPFKLVLVVNMELKMGKGKIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 198
            S  ++D +      D+  E  E+EE   ++G           DGA     S++ + GPFKL+L VN  L MGKGK+ AQCCHATLG Y++  +YC +A++ WE+ GQAK+ VK  T AE+ D+QAKA AAG++ Y V D G TQIA GSRTVLA+GPAP +AF+G++SHLKL+
Sbjct:   15 SKAMSDFVPNSVVDDASNELVEKEESGSESGGSENSDYYLFSDGAYDILNSYTEEDGPFKLILCVNNSLSMGKGKVAAQCCHATLGAYKIAIKYCQTAVENWEDDGQAKVAVKVDTEAEMADLQAKAMAAGLVTYFVQDEGRTQIAAGSRTVLAIGPAPAYAFQGLTSHLKLL 187          
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Match: A0A7S4K0G8_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K0G8_9STRA)

HSP 1 Score: 154 bits (388), Expect = 7.310e-44
Identity = 93/193 (48.19%), Postives = 115/193 (59.59%), Query Frame = 0
Query:   14 IASFLLGALV-----VIFLTSRQYRGGAGKS--LSSRLTDLIGRQDKGD-SIGEGFEEEERALQTGDGARSWSSDTGPFKLVLVVNMELKMGKGKIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 198
            I+ FL GAL+     V+FL  +     +  S  +  +  D     D+GD ++GE  E      QT   AR W  +  P+K+VL VN +LKMGKGKI AQCCHA +G Y+   + CP  ++ WE  G AKI VKCP   E+  I   A   GI  YLV DAG TQIA GSRTVL LGPAPV AFEG++SHLKLM
Sbjct:   11 ISYFLAGALLPTLVYVLFLRGKHETKSSSDSGGIDQQPLDDDSSDDEGDVALGESNES-----QT---ARLWGMNNAPYKMVLCVNQDLKMGKGKIAAQCCHAAVGCYKRARKVCPDGVRAWEQTGCAKIAVKCPNQDEIEVILVAAHKRGIPLYLVADAGRTQIAAGSRTVLGLGPAPVSAFEGVTSHLKLM 195          
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Match: A0A7S0XWF5_HEMAN (Aminoacyl-tRNA hydrolase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWF5_HEMAN)

HSP 1 Score: 150 bits (380), Expect = 1.680e-43
Identity = 75/123 (60.98%), Postives = 91/123 (73.98%), Query Frame = 0
Query:   76 SWSSDTGPFKLVLVVNMELKMGKGKIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 198
            SWS   GP K+VLVVN ELKMGKGKI AQC HATLG Y+   +  P  L+ WE +GQAKICV+CPT AE+ ++  KA+A G+I Y V DAG TQI  GSRTVLA+GPAP  AF+G++ H KL+
Sbjct:   12 SWSVVDGPGKMVLVVNQELKMGKGKIAAQCGHATLGAYK---KASPQVLRMWEGLGQAKICVQCPTEAEMHEVADKARAKGLITYQVTDAGRTQIPAGSRTVLAIGPAPESAFKGVTDHFKLL 131          
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Match: L1JZ89_GUITC (Aminoacyl-tRNA hydrolase (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JZ89_GUITC)

HSP 1 Score: 149 bits (376), Expect = 3.780e-43
Identity = 73/112 (65.18%), Postives = 87/112 (77.68%), Query Frame = 0
Query:   87 VLVVNMELKMGKGKIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 198
            VLVVN ELKMGKGKI AQC HA LG Y+  ++Y PSAL  WE  GQAKICV+CPT  E+++I  KA A G+I Y+VMDAG TQIA GSRTVLA+GPAP   F+G++ HLKL+
Sbjct:    1 VLVVNQELKMGKGKIAAQCGHAVLGAYKRGKKYAPSALTWWEKFGQAKICVQCPTEDEMWEIAKKAGAKGLITYIVMDAGRTQIAAGSRTVLAIGPAPEQQFKGLTDHLKLL 112          
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Match: A0A7S2MVX1_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MVX1_9STRA)

HSP 1 Score: 147 bits (371), Expect = 4.640e-41
Identity = 75/125 (60.00%), Postives = 84/125 (67.20%), Query Frame = 0
Query:   74 ARSWSSDTGPFKLVLVVNMELKMGKGKIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 198
            ++ W    GP+K+VL VN EL MGKGKI AQCCHA +G Y+   + CP+ LK WE  G AKI +KCP   EL  I  KA   GI  YLV DAG TQI  GSRTVL LGPAPV  FEGIS HLKLM
Sbjct:   90 SKEWGMMHGPYKMVLCVNQELGMGKGKIAAQCCHAAVGCYKRSLKQCPNGLKAWERTGCAKIALKCPNEQELTSILEKAYNKGIPCYLVEDAGRTQIKAGSRTVLGLGPAPVDVFEGISDHLKLM 214          
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Match: A0A7S2YD90_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YD90_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.270e-40
Identity = 74/125 (59.20%), Postives = 85/125 (68.00%), Query Frame = 0
Query:   74 ARSWSSDTGPFKLVLVVNMELKMGKGKIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 198
            A  W     P+K+VL VN  L MGKGKI AQCCHA +G Y+   +  P+A+K WE  G AKI VKCP+  E+  I AKA + GI  YLV DAG TQIA GSRTVL LGPAPV  FEG+S HLKLM
Sbjct:   61 ASKWGMFNSPYKMVLCVNTSLSMGKGKIAAQCCHAAVGCYKRANKTIPNAVKAWECTGCAKIAVKCPSEEEMDLICAKAMSKGIPVYLVEDAGRTQIAAGSRTVLGLGPAPVSVFEGVSDHLKLM 185          
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Match: K0SKQ3_THAOC (Aminoacyl-tRNA hydrolase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKQ3_THAOC)

HSP 1 Score: 143 bits (360), Expect = 9.390e-40
Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 0
Query:   76 SWSSDTGPFKLVLVVNMELKMGKGKIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 198
            +W     P+K+VL VN  L MGKGKI AQC HA +G Y+  +R+C + L  WE  G AKI VKCP+  E+ +I AKA + GI  YLV DAG TQIA GSRTVL LGPAPV  F+G+S+HLKLM
Sbjct:   64 AWGISDAPYKMVLCVNTSLSMGKGKIAAQCGHAAVGCYKRAKRHCQAGLSAWERTGCAKIAVKCPSEDEMDEIAAKALSRGIPIYLVEDAGRTQIAAGSRTVLGLGPAPVREFDGVSNHLKLM 186          
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Match: A0A7S4VM04_9STRA (Aminoacyl-tRNA hydrolase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VM04_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.890e-39
Identity = 74/125 (59.20%), Postives = 84/125 (67.20%), Query Frame = 0
Query:   74 ARSWSSDTGPFKLVLVVNMELKMGKGKIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 198
            A  W     P+K+VL VN ELKMG GK +AQC HA +G Y+   + CP+ALK WE  G AKI VKCP   EL  I  KA + GI  YLV DAG TQIA GSRTVL LGPAPV  FEG++ HLKLM
Sbjct:  137 ASQWGIMHAPYKMVLCVNQELKMGPGKKMAQCSHAAVGCYKRSLKQCPAALKAWERTGCAKIAVKCPNETELISILEKAHSKGIPCYLVEDAGRTQIAAGSRTVLGLGPAPVDVFEGVTDHLKLM 261          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWG4_ECTSI5.910e-8284.29Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus silicu... [more]
A0A836C8I9_9STRA1.350e-5062.99Aminoacyl-tRNA hydrolase n=1 Tax=Tribonema minus T... [more]
A0A7S3MCE7_9STRA3.370e-4849.13Aminoacyl-tRNA hydrolase n=1 Tax=Spumella elongata... [more]
A0A7S4K0G8_9STRA7.310e-4448.19Aminoacyl-tRNA hydrolase n=1 Tax=Odontella aurita ... [more]
A0A7S0XWF5_HEMAN1.680e-4360.98Aminoacyl-tRNA hydrolase n=2 Tax=Hemiselmis anders... [more]
L1JZ89_GUITC3.780e-4365.18Aminoacyl-tRNA hydrolase (Fragment) n=2 Tax=Guilla... [more]
A0A7S2MVX1_9STRA4.640e-4160.00Aminoacyl-tRNA hydrolase n=1 Tax=Helicotheca tames... [more]
A0A7S2YD90_9STRA2.270e-4059.20Aminoacyl-tRNA hydrolase n=1 Tax=Amphiprora paludo... [more]
K0SKQ3_THAOC9.390e-4057.72Aminoacyl-tRNA hydrolase n=1 Tax=Thalassiosira oce... [more]
A0A7S4VM04_9STRA1.890e-3959.20Aminoacyl-tRNA hydrolase n=3 Tax=Ditylum brightwel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023476Peptidyl-tRNA hydrolase II domain superfamilyGENE3D3.40.1490.10coord: 82..198
e-value: 7.3E-41
score: 140.7
IPR023476Peptidyl-tRNA hydrolase II domain superfamilySUPERFAMILY102462Peptidyl-tRNA hydrolase IIcoord: 83..198
IPR002833Peptidyl-tRNA hydrolase, PTH2TIGRFAMTIGR00283TIGR00283coord: 85..198
e-value: 5.4E-36
score: 121.4
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 85..198
e-value: 3.8E-39
score: 133.6
IPR002833Peptidyl-tRNA hydrolase, PTH2PANTHERPTHR12649PEPTIDYL-TRNA HYDROLASE 2coord: 14..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..198
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig12contigF-serratus_M_contig12:1313650..1329023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig12.1572.1mRNA_F-serratus_M_contig12.1572.1Fucus serratus malemRNAF-serratus_M_contig12 1313632..1329452 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig12.1572.1 ID=prot_F-serratus_M_contig12.1572.1|Name=mRNA_F-serratus_M_contig12.1572.1|organism=Fucus serratus male|type=polypeptide|length=199bp
METKNIETLLGTSIASFLLGALVVIFLTSRQYRGGAGKSLSSRLTDLIGR
QDKGDSIGEGFEEEERALQTGDGARSWSSDTGPFKLVLVVNMELKMGKGK
IVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQA
KAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023476Pep_tRNA_hydro_II_dom_sf
IPR002833PTH2