prot_F-serratus_M_contig12.1550.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig12.1550.1
Unique Nameprot_F-serratus_M_contig12.1550.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length279
Homology
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Match: D8LFE5_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE5_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 9.140e-103
Identity = 163/283 (57.60%), Postives = 207/283 (73.14%), Query Frame = 0
Query:    1 MTVKASVETCIRAIEDSLGVAPEVGDTSPTSGRTGSQHASAT--ELLDSVIHELEASLRTE-GTGVKANGVGGVANRGEKKETEARKLQNKNVINGSTSALSGLSGVG--DQPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASGLVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVEFIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEEGTVRWRQHALMSSLGPCSAPTVRGGAVR 278
            M+ ++ ++ CI+ +EDSLGV   + D   + G   S  A AT  +L+DS I  LEASL    G  +      G+A    K+ T+ ++  NK     +  A +   GV   DQPDGTK+DLRVG+IT+VW HET DKLYCEEIDVGEGAPR IASGLVP++S+++MK R+V+VMCNLK RNLKGFKSQGMV+CA  ALGDGKEHVE +VPPE   +G++L F+G++GGPF+P +AAQMEKKKVL+++LPEL TD EGTVRWR HAL+SS G C+APTVR GAVR
Sbjct:    1 MSARSKLDACIKGLEDSLGVPAALKD---SIGGVPSTTAPATALQLVDSTIATLEASLGLPPGAVLTPVDAKGIAGGDTKRPTKGKEGVNKGGRKKAGKAAASNVGVSSADQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVVPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKILPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 280          
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Match: A0A7S2Y0W4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0W4_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.630e-71
Identity = 105/174 (60.34%), Postives = 131/174 (75.29%), Query Frame = 0
Query:  105 GDQPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASGLVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVEFIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEEGTVRWRQHALMSSLGPCSAPTVRGGAVR 278
            GDQPD TK+DLRVG+ITKVW HET DKLYCEEIDVGE  PR IASGLVP++S+++M+ RRV+V+CNLK RNL GFKS GMV+CA     DG E VEF+ PPE   +G+++ ++G+ GGPF+P TAAQ+EKKKV   VLP L TD      W+ H +M+S GPC A T+  G +R
Sbjct:   78 GDQPDITKIDLRVGKITKVWRHETADKLYCEEIDVGEDEPRAIASGLVPHYSLEEMQGRRVLVLCNLKPRNLVGFKSHGMVLCAVENKPDGSEKVEFVEPPEGAAVGERVQYEGLGGGPFEPITAAQVEKKKVFPAVLPNLSTDANHVGMWKGHKMMTSAGPCVAATISNGKLR 251          
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Match: G4YER7_PHYSP (tRNA-binding domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YER7_PHYSP)

HSP 1 Score: 221 bits (563), Expect = 1.090e-68
Identity = 118/242 (48.76%), Postives = 157/242 (64.88%), Query Frame = 0
Query:   39 ASATELLDSVIHELEASLRTEGTGVKANGVGGVANRGEKKETEARKLQNKNVINGSTSALSGLSGVGD--QPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASGLVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVEFIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEEGTVRWRQHALMSSLGPCSAPTVRGGAVR 278
            +SA E + S+I  +E+ L     G++AN   G          EA+K Q K             +   D  QP+ TKLD+RVG+I KVW HET DKLYCEEIDVGE APRQIASGLV ++S++ M+D RV+V+CNLK RNL GF+S GMVMCAA  L DGKE V F+ PPE   +G+++ F+G++G PF PA   Q+EKKKVL  +  E++TD+ G  +W++H   +S GPC+AP V  G +R
Sbjct:    3 SSAAEQIQSLISAVESDL-----GIEANAPVGA---------EAQKQQQKPKAXXXXXXXXAKAPAADPNQPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDAPRQIASGLVHHYSLEQMQDARVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPEGAKVGERITFEGLTGEPFSPA---QVEKKKVLTVLGDEMKTDDSGVAKWKEHVFGTSAGPCTAP-VNNGLIR 226          
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Match: A0A8K1CBM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBM3_PYTOL)

HSP 1 Score: 228 bits (582), Expect = 2.710e-68
Identity = 116/239 (48.54%), Postives = 153/239 (64.02%), Query Frame = 0
Query:   40 SATELLDSVIHELEASLRTEGTGVKANGVGGVANRGEKKETEARKLQNKNVINGSTSALSGLSGVGDQPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASGLVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVEFIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEEGTVRWRQHALMSSLGPCSAPTVRGGAVR 278
            SA+E LD +I ++E  L  +      +    V      KE  A   + K    G            DQP+ TKLD+RVG+I KVW HET DKLYCEEIDVGE  PRQIASGLV ++S+++M+D R++V+CNLKARNL GFKS GMVMCAA  L DGKE V+F+ PP D  +G++++FDG++G PF PA   Q+EKKKVL  +  +++TDE G   W+ H   +S GPC+AP V    +R
Sbjct:  255 SASEQLDKLIRDIETDLGIDANAPLPSDKKPVKKAAAAKEAGAEGAKPKKE-KGPKPVKKAAEADADQPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDEPRQIASGLVYHYSLEEMQDHRILVLCNLKARNLVGFKSHGMVMCAATPLEDGKEKVKFVEPPADAKIGERIVFDGLTGEPFTPA---QVEKKKVLVNIGEDMKTDENGVATWKGHVFQTSAGPCTAPGVPNAVIR 489          
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Match: K3W9Y0_GLOUD (tRNA-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9Y0_GLOUD)

HSP 1 Score: 217 bits (552), Expect = 6.500e-67
Identity = 97/169 (57.40%), Postives = 128/169 (75.74%), Query Frame = 0
Query:  106 DQPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASGLVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVEFIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEEGTVRWRQHALMSSLGPCSAPTVRG 274
            DQP+ TKLD+RVG+I KVW HET DKLYCEEIDVGE  PRQIASGLV ++S+++M+DRR++V+CNLK RNL GFKS GMVMCAA  +  GKE V F+ PP D  +G++++FDG++G P+ PA   Q+EKKKVL  +  +++TD  G  +W+ H   +S GPC+AP   G
Sbjct:   66 DQPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDEPRQIASGLVYHYSLEEMQDRRILVLCNLKPRNLVGFKSHGMVMCAAVPIEGGKEKVAFVDPPADAKIGERIVFDGLTGEPYTPA---QVEKKKVLVNIGEDMKTDASGVAKWKDHVFNTSAGPCTAPVANG 231          
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Match: D0MS46_PHYIT (tRNA-binding domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MS46_PHYIT)

HSP 1 Score: 216 bits (550), Expect = 1.040e-66
Identity = 99/173 (57.23%), Postives = 132/173 (76.30%), Query Frame = 0
Query:  106 DQPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASGLVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVEFIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEEGTVRWRQHALMSSLGPCSAPTVRGGAVR 278
            +QP+ TKLD+RVG+I KVW HET DKLYCEEIDVGE  PR IASGLV ++S+++M+DRRV+V+CNLK RNL GF+S GMVMCAA  L DGKE V F+ PPE   +G+++ F+G++G PF PA   Q+EKKKVL  +  +++TD+ G  +W++H   +S GPC+AP V  G +R
Sbjct:   59 NQPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDEPRHIASGLVYHYSLEEMQDRRVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPEGAKIGERITFEGLTGEPFSPA---QVEKKKVLTVLGDDMKTDDNGVAKWKEHVFGTSAGPCTAP-VNNGVIR 227          
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Match: A0A8J5IV42_9STRA (tRNA-binding domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IV42_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.520e-66
Identity = 116/239 (48.54%), Postives = 159/239 (66.53%), Query Frame = 0
Query:   40 SATELLDSVIHELEASLRTEGTGVKANGVGGVANRGEKKETEARKLQNKNVINGSTSALSGLSGVGDQPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASGLVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVEFIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEEGTVRWRQHALMSSLGPCSAPTVRGGAVR 278
            SATE + S+I  LE  L     G++AN     A  G  K+ + +K Q       + +  +  +    QP+ TKLD+RVG+I KVW HET DKLYCEEIDVGE  PR IASGLV ++S+++M+DRRV+V+CNLK RNL GF+S GMVMCAA  LGD KE V F+ PPE   +G+++ F+G++G PF PA   Q+EKKKVL  +  +++TD+ G  +W++H   +S GPC+AP V  G +R
Sbjct:  159 SATEQIQSLISSLETDL-----GIEAN-----APIGNDKKPQQQKEQXXXXXXPAKAPAADPN----QPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDEPRHIASGLVYHYSLEEMQDRRVLVLCNLKPRNLVGFRSHGMVMCAAVPLGDDKEKVAFVTPPEGAKIGERITFEGLTGEPFSPA---QVEKKKVLTVLGDDMKTDDNGVAKWKEHVFGTSAGPCTAP-VNNGVIR 379          
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Match: M4BIG3_HYAAE (tRNA-binding domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIG3_HYAAE)

HSP 1 Score: 214 bits (544), Expect = 8.400e-66
Identity = 99/173 (57.23%), Postives = 130/173 (75.14%), Query Frame = 0
Query:  106 DQPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASGLVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVEFIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEEGTVRWRQHALMSSLGPCSAPTVRGGAVR 278
            +QP+ TKLD+RVG I  VW HET DKLYCEEIDVGE APRQIASGLVP++++++M+DRRV+V+CNLKARNL GF+S GMV+CAA  L DGKEHV F+ PP D  +G+++ F G+ G P  PA   Q+EKKKVL  +   ++TD++G  +W +H   +S GPC+A  V  G +R
Sbjct:   59 NQPEITKLDIRVGHIINVWKHETADKLYCEEIDVGEDAPRQIASGLVPHYTLEEMQDRRVLVLCNLKARNLVGFRSHGMVLCAAVPLADGKEHVVFVTPPLDAKVGERITFPGLVGEPLSPA---QVEKKKVLAVLGDAMKTDDKGVAKWLEHEFTTSAGPCTA-LVNNGVIR 227          
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Match: A0A662WEL3_9STRA (tRNA-binding domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WEL3_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.050e-65
Identity = 98/169 (57.99%), Postives = 127/169 (75.15%), Query Frame = 0
Query:  106 DQPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASGLVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVEFIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEEGTVRWRQHALMSSLGPCSAPTVRG 274
            +QP+ TKLD+RVG+I KVW HET DKLYCEEIDVGE APRQIASGLV ++S+++M+ RRV+V+CNLK RNL GF+S GMVMC A  L DGKE V F+ PP D  LG+++ F+G+ G PF PA   Q+EKKKVL  +  +++TD+ G  +W+ H   +S GPC+AP   G
Sbjct:   77 NQPEITKLDIRVGQIVKVWKHETADKLYCEEIDVGEDAPRQIASGLVFHYSLEEMQGRRVLVLCNLKPRNLVGFRSHGMVMCTAVPLADGKERVAFVTPPTDAKLGERVSFEGLDGEPFSPA---QVEKKKVLAVLGDDMKTDDAGVAKWKTHVFGTSAGPCTAPVTNG 242          
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Match: A0A2D4BR83_PYTIN (Methionine-tRNA ligase, beta subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR83_PYTIN)

HSP 1 Score: 219 bits (559), Expect = 1.070e-65
Identity = 99/169 (58.58%), Postives = 129/169 (76.33%), Query Frame = 0
Query:  106 DQPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASGLVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVEFIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEEGTVRWRQHALMSSLGPCSAPTVRG 274
            DQP+ TKLD+RVG+I KVW H+T DKLYCEEIDVGE APRQIASGLV ++S+++M+DRR++V+CNLKARNL GFKS GMVMCAA    DGKE V F+ PP D  +G++++F+G++G PF PA   Q+EKKKVL  +  +++TD  G   W+ H   +S GPC+AP   G
Sbjct:  245 DQPEITKLDIRVGKIVKVWKHDTADKLYCEEIDVGEDAPRQIASGLVYHYSLEEMQDRRILVLCNLKARNLVGFKSHGMVMCAAVPTEDGKEKVAFVEPPADAAIGERIVFEGLTGEPFTPA---QVEKKKVLVNIGEDMKTDANGIATWKGHVFQTSAGPCTAPVANG 410          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE5_ECTSI9.140e-10357.60tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A7S2Y0W4_9STRA1.630e-7160.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
G4YER7_PHYSP1.090e-6848.76tRNA-binding domain-containing protein n=3 Tax=Phy... [more]
A0A8K1CBM3_PYTOL2.710e-6848.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3W9Y0_GLOUD6.500e-6757.40tRNA-binding domain-containing protein n=1 Tax=Glo... [more]
D0MS46_PHYIT1.040e-6657.23tRNA-binding domain-containing protein n=11 Tax=Ph... [more]
A0A8J5IV42_9STRA1.520e-6648.54tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
M4BIG3_HYAAE8.400e-6657.23tRNA-binding domain-containing protein n=1 Tax=Hya... [more]
A0A662WEL3_9STRA1.050e-6557.99tRNA-binding domain-containing protein n=1 Tax=Not... [more]
A0A2D4BR83_PYTIN1.070e-6558.58Methionine-tRNA ligase, beta subunit n=1 Tax=Pythi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 105..278
e-value: 8.4E-51
score: 174.0
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 72..277
NoneNo IPR availablePANTHERPTHR11586:SF39NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEINcoord: 72..277
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 115..213
e-value: 1.2E-25
score: 89.5
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 109..215
score: 28.122
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 108..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig12contigF-serratus_M_contig12:804925..864997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig12.1550.1mRNA_F-serratus_M_contig12.1550.1Fucus serratus malemRNAF-serratus_M_contig12 804883..865387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig12.1550.1 ID=prot_F-serratus_M_contig12.1550.1|Name=mRNA_F-serratus_M_contig12.1550.1|organism=Fucus serratus male|type=polypeptide|length=279bp
MTVKASVETCIRAIEDSLGVAPEVGDTSPTSGRTGSQHASATELLDSVIH
ELEASLRTEGTGVKANGVGGVANRGEKKETEARKLQNKNVINGSTSALSG
LSGVGDQPDGTKLDLRVGRITKVWPHETGDKLYCEEIDVGEGAPRQIASG
LVPYFSIDDMKDRRVVVMCNLKARNLKGFKSQGMVMCAAAALGDGKEHVE
FIVPPEDVPLGDKLLFDGVSGGPFKPATAAQMEKKKVLERVLPELRTDEE
GTVRWRQHALMSSLGPCSAPTVRGGAVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold