prot_F-serratus_M_contig1186.1467.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1186.1467.1
Unique Nameprot_F-serratus_M_contig1186.1467.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length155
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1186.1467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..155
e-value: 8.5E-25
score: 89.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 65..154
NoneNo IPR availablePFAMPF13424TPR_12coord: 96..155
e-value: 2.2E-13
score: 50.3
NoneNo IPR availablePFAMPF13374TPR_10coord: 65..88
e-value: 0.018
score: 14.9
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 7..155
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 7..155
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 93..155
score: 10.776
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 93..126
score: 8.968

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1186contigF-serratus_M_contig1186:82533..82997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1186.1467.1mRNA_F-serratus_M_contig1186.1467.1Fucus serratus malemRNAF-serratus_M_contig1186 82515..82997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1186.1467.1 ID=prot_F-serratus_M_contig1186.1467.1|Name=mRNA_F-serratus_M_contig1186.1467.1|organism=Fucus serratus male|type=polypeptide|length=155bp
MLSLGRLVDCSRSLGQVNEAKEWQQKQRKALALAITRVSKYSQIDTKYAT
ELTLPGLVITGNDPGRNSDAEDFLRRALEIQQQMLGRENVSVVYALDNLG
RHLHEVGKYDEAEEVLRQALELMEVKLGTKNLQVVNTLCELGECLRKAKR
YDEAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR019734TPR_repeat