prot_F-serratus_M_contig1156.1287.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1156.1287.1
Unique Name	prot_F-serratus_M_contig1156.1287.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	124

Homology

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BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 6.850e-69
Identity = 108/121 (89.26%), Postives = 116/121 (95.87%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASK 121
            M+GKGKGGRGKK+ +RS+KAGLQFPVGR+GRFLK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121

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BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 1.490e-68
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASKG 122
            M+GKGKGGRGKK+ S+SSKAGLQFPV RIGR+LK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+S G
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVG 122

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BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 4.030e-68
Identity = 108/121 (89.26%), Postives = 116/121 (95.87%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASK 121
            M+GKGKGGRGKK+ +RS+KAGLQFPVGR+GRFLK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK  K
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166

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BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 7.680e-68
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASKG 122
            M+GKGKGGRGKK+ S+SSKAGLQFPV RIGR+LK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+S G
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVG 173

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BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.200e-66
Identity = 105/118 (88.98%), Postives = 112/118 (94.92%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            M+GKGKGGRGKK  SRS+KAGLQFPVGRIGRF+K GKYS RVG G+PVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118

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BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.220e-64
Identity = 104/123 (84.55%), Postives = 114/123 (92.68%), Query Frame = 0

Query:    1 MTGKGKGGRG---KKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKAS 120
            M GKGKGGRG   KK+ S+SSKAGLQFPV R+GRFLKVG+Y++RVGAG+PVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK +
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTA 123

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BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Match: C1EAM9_MICCC (Histone H2A n=7 Tax=cellular organisms TaxID=131567 RepID=C1EAM9_MICCC)

HSP 1 Score: 197 bits (501), Expect = 3.000e-63
Identity = 101/121 (83.47%), Postives = 112/121 (92.56%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASK 121
            M+G+GKG  GKKA SRS+KAGLQFPVGRI R+LKVGKY+ RVGAG+PVYLAAVLEYL AEVLELAGNA+RDNKK RIVPRHIQLA+RNDEEL+KLLG VTIASGGVLPNIH+VLLPKK+ K
Sbjct:    1 MSGRGKGKSGKKAVSRSAKAGLQFPVGRIARYLKVGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNASRDNKKTRIVPRHIQLAIRNDEELSKLLGTVTIASGGVLPNIHSVLLPKKSKK 121

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BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 196 bits (497), Expect = 1.800e-62
Identity = 100/119 (84.03%), Postives = 110/119 (92.44%), Query Frame = 0

Query:    3 GKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASK 121
            GKGK   GKKA SRS+KAGLQFPVGR+ R+LK GKY+ R+GAG+PVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKK+ K
Sbjct:    5 GKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDK 123

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BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Match: H2A_CHLRE (Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 RepID=H2A_CHLRE)

HSP 1 Score: 195 bits (496), Expect = 2.170e-62
Identity = 103/123 (83.74%), Postives = 111/123 (90.24%), Query Frame = 0

Query:    1 MTGKGKGGR-GKKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASKG 122
            M G+GKG   GKKA SRS+KAGLQFPVGRI R+LK GKY++R+GAG+PVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLA+RNDEEL KLLGEVTIASGGVLPNIHAVLLPKK   G
Sbjct:    1 MAGRGKGKTSGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKKTKGG 123

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BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Match: A0A7S0S3G4_9CHLO (Histone H2A n=2 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S3G4_9CHLO)

HSP 1 Score: 195 bits (496), Expect = 2.910e-62
Identity = 99/116 (85.34%), Postives = 109/116 (93.97%), Query Frame = 0

Query:    6 KGGRGKKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASK 121
            KGG GKKA SRS+KAGLQFPVGRI R+LK GKY++R+GAG+PVYLAAVLEYL AEVLELAGNAARDNKK RIVPRHIQLA+RNDEEL+KLLGEVTIASGGVLPNIH+VLLPKK+ K
Sbjct:   16 KGGSGKKAQSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLCAEVLELAGNAARDNKKTRIVPRHIQLAIRNDEELSKLLGEVTIASGGVLPNIHSVLLPKKSKK 131

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1156.1287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI9_ECTSI	6.850e-69	89.26	Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A6H5KG79_9PHAE	1.490e-68	89.34	Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D7G193_ECTSI	4.030e-68	89.26	Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
D7FVQ5_ECTSI	7.680e-68	89.34	Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
D8LLP0_ECTSI	1.200e-66	88.98	Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8...	[more]
A0A836CG77_9STRA	3.220e-64	84.55	Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
C1EAM9_MICCC	3.000e-63	83.47	Histone H2A n=7 Tax=cellular organisms TaxID=13156...	[more]
A0A061QUG5_9CHLO	1.800e-62	84.03	Histone H2A n=4 Tax=core chlorophytes TaxID=269224...	[more]
H2A_CHLRE	2.170e-62	83.74	Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 ...	[more]
A0A7S0S3G4_9CHLO	2.910e-62	85.34	Histone H2A n=2 Tax=Chlamydomonas leiostraca TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 41..56 score: 84.58 coord: 70..84 score: 74.98 coord: 56..69 score: 90.54 coord: 98..116 score: 76.04 coord: 12..34 score: 72.34
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 3..121 e-value: 4.1E-77 score: 272.2
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 90..122 e-value: 1.2E-19 score: 69.8
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 2..123 e-value: 7.9E-61 score: 205.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 3..121
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 11..87 e-value: 1.1E-14 score: 54.9
None	No IPR available	PANTHER	PTHR23430:SF251		coord: 5..119
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 5..119
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 20..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1156	contig	F-serratus_M_contig1156:91030..91401 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1156.1287.1	mRNA_F-serratus_M_contig1156.1287.1	Fucus serratus male	mRNA	F-serratus_M_contig1156 91030..91401 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1156.1287.1 ID=prot_F-serratus_M_contig1156.1287.1|Name=mRNA_F-serratus_M_contig1156.1287.1|organism=Fucus serratus male|type=polypeptide|length=124bp
MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYL
AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVT
IASGGVLPNIHAVLLPKKASKGT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002119	Histone_H2A
IPR032454	Histone_H2A_C
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3
IPR032458	Histone_H2A_CS