prot_F-serratus_M_contig1150.1269.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1150.1269.1
Unique Nameprot_F-serratus_M_contig1150.1269.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length106
Homology
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BLAST of mRNA_F-serratus_M_contig1150.1269.1 vs. uniprot
Match: A0A6H5K3I9_9PHAE (Sulfate_transp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I9_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 9.580e-6
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0 
Query:   60 ADDTAAVQAGLDRTR-------VVRALSHGILNGILLSPVAVSFAAIIFRDPAF 106
            A  TAAV A  D+ R       VVR L++G++NGILL PV VSFAA+IFRDPAF
Sbjct:    5 AGTTAAVPAA-DKKRPPLLPESVVRGLAYGMVNGILLPPVMVSFAAMIFRDPAF 57
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BLAST of mRNA_F-serratus_M_contig1150.1269.1 vs. uniprot
Match: D8LSJ4_ECTSI (Sulfate_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ4_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.030e-5
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0 
Query:   60 ADDTAAVQAGLDRTR-------VVRALSHGILNGILLSPVAVSFAAIIFRDPAF 106
            A  TAAV A  D+ R       VVR L++G++NGILL PV VSFAA+IFRDPAF
Sbjct:    5 AGTTAAVPAA-DKKRPPLLPESVVRGLAYGMVNGILLPPVMVSFAAMIFRDPAF 57
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1150.1269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3I9_9PHAE9.580e-659.26Sulfate_transp domain-containing protein n=1 Tax=E... [more]
D8LSJ4_ECTSI1.030e-559.26Sulfate_transp domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..81
NoneNo IPR availableTMHMMTMhelixcoord: 79..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1150contigF-serratus_M_contig1150:211963..245411 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1150.1269.1mRNA_F-serratus_M_contig1150.1269.1Fucus serratus malemRNAF-serratus_M_contig1150 211963..245464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1150.1269.1 ID=prot_F-serratus_M_contig1150.1269.1|Name=mRNA_F-serratus_M_contig1150.1269.1|organism=Fucus serratus male|type=polypeptide|length=106bp
MFGRRRRTRGREEDHIADGSGGGTPMLYGSDARSSSDGAHNGVIGTGEGI
GEGDPKGCAADDTAAVQAGLDRTRVVRALSHGILNGILLSPVAVSFAAII
FRDPAF
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