prot_F-serratus_M_contig1109.1019.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1109.1019.1
Unique Name	prot_F-serratus_M_contig1109.1019.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	314

Homology

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BLAST of mRNA_F-serratus_M_contig1109.1019.1 vs. uniprot
Match: D8LMA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA0_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.070e-33
Identity = 157/373 (42.09%), Postives = 185/373 (49.60%), Query Frame = 0

Query:   69 QGRLLAMQQRKRHANHDVLMLQNRISLLRKEEERATLVCDDRAPQAWKKIQLAKLRSEEILRMREENEKRTRPTRNVCSICQADECKLQKERNYAVEEMARQKRSRMLREFTTSRRDDVAQVRQ------------------------------EK--------------HRLRENLI----------------------------------------------------------SMRQD-------------------IFRENREKR------SDIKHQEDEARNARLEGKARAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELALIQQLKNTQTMQRRAYAELEAALSDSRALATRPFVSQHPGVR 314
            QGRLLAMQQRKRHA+HD L+LQNRISLLRKEE +A           WKKI+  K RSEEILR+RE+NE+R    R   +  QAD CKLQ +RN AVEE AR  R R+  E   +R++ VAQVRQ                              EK              H  R++                                                            S++QD                   +F   R         SDIK +E+EARNARLEG+AR V   XXXXXXXXXXXXXXXXXXXXXXXXXXX+EL+LIQQLKNTQ +Q+RAY ELEAAL DSRA+A +PF  +H G R
Sbjct:    4 QGRLLAMQQRKRHADHDALLLQNRISLLRKEEAKA-----------WKKIETTKQRSEEILRLREQNERRV-VERISAAERQADNCKLQNQRNQAVEETARLNRIRIYHELAAARKNSVAQVRQKLTIGEGPVQSPNRTLFSDNTDLVFALDNEEKVVGISVVPGQMQRFHEARQDSCVKEENNEYSERNLGAVFRSSCFFSMHANGQGEPERPMTHPWATTPESSTGHLAPLEDRSLKQDSRWPSPNLWNPEVAGRITPMFYSGRPSSYGLWLWSDIKQREEEARNARLEGRARLVEESXXXXXXXXXXXXXXXXXXXXXXXXXXXKELSLIQQLKNTQALQQRAYQELEAALGDSRAMAAKPFPVEHVGDR 364

[Close]

BLAST of mRNA_F-serratus_M_contig1109.1019.1 vs. uniprot
Match: A0A7S3XZU6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU6_HETAK)

HSP 1 Score: 117 bits (293), Expect = 1.000e-27
Identity = 83/237 (35.02%), Postives = 126/237 (53.16%), Query Frame = 0

Query:   61 LPSETFRYQGRLLAMQQRKRHANHDVLMLQNRISLLRKEEERATLVCDDRAPQAWKKIQLAKLRSEEILRMREENEKRTRPTRNVCSICQADECKLQKERNYAVEEMARQKRSRMLREFTTSRRDDVAQVRQEKHRLRENLISMRQDIFRENREKRSDIKHQEDEARNARLEGKARAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELALIQQLKNTQTMQRRAYAELEAALSD 297
            LPSE + Y G+LL+ QQRK+ A HD  +L NRI+LL+KEEERA           W+KI   K R++EIL++RE+NEKR            + + +L  E+N   EE+AR+ R++ +      +++ V  VRQEK  +R  L+ MR+    +NR +R ++  QE + R  R   +A  +                               E+ LIQ+LK+TQ +Q+ AY+ELE AL++
Sbjct:   16 LPSEVYNYNGKLLSAQQRKKQAKHDAQLLANRIALLQKEEERA-----------WRKIHQTKNRAQEILKLREDNEKRMEERMQAAMHANSIQQQLA-EQNKVNEELARRNRAQQVERMFKEKKEKVQAVRQEKQLMRRELLGMRESDVVQNRRRREEVLAQEQQLREMRERERALKLEQNKKNYEEKVKNEHQESKAKEKEVEQLERVEMELIQKLKSTQLLQQNAYSELENALNE 240

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1109.1019.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1109.1019.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LMA0_ECTSI	1.070e-33	42.09	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S3XZU6_HETAK	1.000e-27	35.02	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 274..294
None	No IPR available	COILS	Coil	Coil	coord: 187..207
None	No IPR available	COILS	Coil	Coil	coord: 212..269
None	No IPR available	PANTHER	PTHR37473	FAMILY NOT NAMED	coord: 71..299

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1109	contig	F-serratus_M_contig1109:139001..148588 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1109.1019.1	mRNA_F-serratus_M_contig1109.1019.1	Fucus serratus male	mRNA	F-serratus_M_contig1109 139001..148588 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1109.1019.1 ID=prot_F-serratus_M_contig1109.1019.1|Name=mRNA_F-serratus_M_contig1109.1019.1|organism=Fucus serratus male|type=polypeptide|length=314bp
TVSKRPYCIIYKAKGEILAVYLNYIVSPAWIDTRQESFCDAQGNDLAMAP
EPPAAPTPTPLPSETFRYQGRLLAMQQRKRHANHDVLMLQNRISLLRKEE
ERATLVCDDRAPQAWKKIQLAKLRSEEILRMREENEKRTRPTRNVCSICQ
ADECKLQKERNYAVEEMARQKRSRMLREFTTSRRDDVAQVRQEKHRLREN
LISMRQDIFRENREKRSDIKHQEDEARNARLEGKARAVEESRRSYENRVK
REEDEIAAREQKVARMEQRELALIQQLKNTQTMQRRAYAELEAALSDSRA
LATRPFVSQHPGVR