prot_F-serratus_M_contig1108.1013.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1108.1013.1
Unique Nameprot_F-serratus_M_contig1108.1013.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length148
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1108.1013.1 vs. uniprot
Match: D8LHX8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHX8_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 2.960e-38
Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 0 
Query:   19 CATCGVVKQIAEFSRNQLARHGRQVCQNCLAGPGPPAAPPTRVAPAAGEGHVRCVACCQLKPTSSFGINQLRRRAGIERCMACVESDKGSL 109
            C  CGV K  +E+SRNQLAR  R+VCQ CL   G  AAPP+RVAPAAGEG VRCVACCQ+K TSSFGINQLRRRAGIERCM CVE D GS+
Sbjct:   12 CTVCGVRKPASEYSRNQLARSSREVCQVCLMSDGTVAAPPSRVAPAAGEGVVRCVACCQVKTTSSFGINQLRRRAGIERCMLCVEKDLGSV 102
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1108.1013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHX8_ECTSI2.960e-3873.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024630Stc1 domainPFAMPF12898Stc1coord: 15..48
e-value: 1.2E-4
score: 22.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1108contigF-serratus_M_contig1108:188985..190137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1108.1013.1mRNA_F-serratus_M_contig1108.1013.1Fucus serratus malemRNAF-serratus_M_contig1108 188226..190337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1108.1013.1 ID=prot_F-serratus_M_contig1108.1013.1|Name=mRNA_F-serratus_M_contig1108.1013.1|organism=Fucus serratus male|type=polypeptide|length=148bp
MEGAAGYAAAGSGHQTAMCATCGVVKQIAEFSRNQLARHGRQVCQNCLAG
PGPPAAPPTRVAPAAGEGHVRCVACCQLKPTSSFGINQLRRRAGIERCMA
CVESDKGSLVLCTGCGKQKPFTEFSKKQIACKPGSERCKMCIENSSK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024630Stc1