prot_F-serratus_M_contig1106.992.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1106.992.1
Unique Nameprot_F-serratus_M_contig1106.992.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length70
Homology
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Match: D8LRT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRT4_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.580e-38
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0
Query:    1 MSDVNELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVNELLI PLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKL+HIPINNI+M G
Sbjct:    1 MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMAG 69          
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Match: A0A835YV57_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV57_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.080e-36
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 0
Query:    1 MSDVNELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVNELLIIPLQ+F KDS+ L+KKCTKPDRKEFM VAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG
Sbjct:    1 MSDVNELLIIPLQQFFKDSVQLVKKCTKPDRKEFMIVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69          
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Match: W7U037_9STRA (Transport protein sec61 subunit gamma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U037_9STRA)

HSP 1 Score: 112 bits (280), Expect = 6.610e-31
Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 MSDVNELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVN  +I PL+KF+KDS HL+KKCTKPDRKEF ++A AT+VGFL+MGFIGFFVKLIHIPINNI++GG
Sbjct:   24 MSDVNAHIIQPLKKFAKDSSHLVKKCTKPDRKEFARIAYATSVGFLIMGFIGFFVKLIHIPINNILLGG 92          
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Match: K3X8N9_GLOUD (Uncharacterized protein n=6 Tax=Oomycota TaxID=4762 RepID=K3X8N9_GLOUD)

HSP 1 Score: 110 bits (274), Expect = 3.000e-30
Identity = 52/69 (75.36%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 MSDVNELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVN L+  PLQ+F K+S+HLIKKCTKPDRKEF ++A AT+VGFL+MGFIGFFVKL+HIPINNI++GG
Sbjct:    1 MSDVNTLVFQPLQQFFKNSVHLIKKCTKPDRKEFTRIAAATSVGFLMMGFIGFFVKLVHIPINNILVGG 69          
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Match: W4FU52_9STRA (Protein transporter Sec61 subunit gamma n=8 Tax=Oomycota TaxID=4762 RepID=W4FU52_9STRA)

HSP 1 Score: 109 bits (272), Expect = 6.050e-30
Identity = 51/69 (73.91%), Postives = 64/69 (92.75%), Query Frame = 0
Query:    1 MSDVNELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVN L+I PL++F+K+S+HL+KKCTKPDRKEF ++A AT VGFL+MGFIGFFVKL+HIPINNI++GG
Sbjct:    1 MSDVNALVIEPLKQFAKNSVHLVKKCTKPDRKEFARIAGATGVGFLLMGFIGFFVKLVHIPINNILVGG 69          
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Match: A0A067CAZ0_SAPPC (Translocase SEC61 complex gamma subunit n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAZ0_SAPPC)

HSP 1 Score: 108 bits (270), Expect = 1.190e-29
Identity = 49/69 (71.01%), Postives = 64/69 (92.75%), Query Frame = 0
Query:    1 MSDVNELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVN ++I PL+ F+K+S+HL+KKCTKPDRKEF ++A AT++GFL+MGFIGFFVKL+HIPINNI++GG
Sbjct:    1 MSDVNAIVIEPLKAFAKNSIHLVKKCTKPDRKEFTRIAGATSIGFLMMGFIGFFVKLVHIPINNILVGG 69          
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Match: A0A1Z5K738_FISSO (Protein transport protein SEC61 subunit gamma and related proteins n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K738_FISSO)

HSP 1 Score: 107 bits (267), Expect = 3.500e-29
Identity = 47/64 (73.44%), Postives = 62/64 (96.88%), Query Frame = 0
Query:    6 ELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            E+L+ PL++F+KDS+HL++KCTKPDRKEF Q+A+AT++GFL+MGFIGFFVKLIHIPINNI++GG
Sbjct:    9 EVLVEPLRQFAKDSLHLVQKCTKPDRKEFTQIARATSIGFLIMGFIGFFVKLIHIPINNILVGG 72          
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Match: M4BH76_HYAAE (Uncharacterized protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=M4BH76_HYAAE)

HSP 1 Score: 106 bits (265), Expect = 6.880e-29
Identity = 50/69 (72.46%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 MSDVNELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVN L+  PL++F K+S+HLIKKC KPDRKEF ++A AT+VGFL+MGFIGFFVKL+HIPINNI++GG
Sbjct:    1 MSDVNTLVFQPLKEFFKNSLHLIKKCNKPDRKEFARIAGATSVGFLLMGFIGFFVKLVHIPINNILVGG 69          
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Match: B7FQV9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQV9_PHATC)

HSP 1 Score: 106 bits (265), Expect = 7.270e-29
Identity = 50/63 (79.37%), Postives = 59/63 (93.65%), Query Frame = 0
Query:    6 ELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMG 68
            E+LI PLQ+F+KDSMHL+KKCTKPDRKEF  +A+AT VGFL+MGFIGFFVKLIHIPINNI++G
Sbjct:   10 EVLIEPLQQFAKDSMHLVKKCTKPDRKEFTAIARATGVGFLIMGFIGFFVKLIHIPINNILVG 72          
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Match: B5YLP6_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLP6_THAPS)

HSP 1 Score: 106 bits (264), Expect = 1.010e-28
Identity = 48/64 (75.00%), Postives = 60/64 (93.75%), Query Frame = 0
Query:    5 NELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMG 68
            NE+LI PL++F+KDS+HL+KKCTKPDRKEF  +AKAT +GFL+MGFIGFFVKL+HIPINNI++G
Sbjct:    8 NEVLIQPLRQFAKDSIHLVKKCTKPDRKEFTAIAKATGIGFLIMGFIGFFVKLVHIPINNILVG 71          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1106.992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRT4_ECTSI1.580e-3894.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YV57_9STRA3.080e-3691.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U037_9STRA6.610e-3176.81Transport protein sec61 subunit gamma n=2 Tax=Mono... [more]
K3X8N9_GLOUD3.000e-3075.36Uncharacterized protein n=6 Tax=Oomycota TaxID=476... [more]
W4FU52_9STRA6.050e-3073.91Protein transporter Sec61 subunit gamma n=8 Tax=Oo... [more]
A0A067CAZ0_SAPPC1.190e-2971.01Translocase SEC61 complex gamma subunit n=2 Tax=Sa... [more]
A0A1Z5K738_FISSO3.500e-2973.44Protein transport protein SEC61 subunit gamma and ... [more]
M4BH76_HYAAE6.880e-2972.46Uncharacterized protein n=16 Tax=Peronosporaceae T... [more]
B7FQV9_PHATC7.270e-2979.37Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B5YLP6_THAPS1.010e-2875.00Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008158Protein translocase SEC61 complex, gamma subunitTIGRFAMTIGR00327TIGR00327coord: 12..66
e-value: 8.9E-18
score: 61.8
IPR023391Protein translocase SecE domain superfamilyGENE3D1.20.5.820coord: 8..69
e-value: 9.3E-33
score: 113.6
IPR023391Protein translocase SecE domain superfamilySUPERFAMILY103456Preprotein translocase SecE subunitcoord: 12..66
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 14..66
e-value: 3.7E-15
score: 55.6
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitHAMAPMF_00422SecEcoord: 10..65
score: 11.922
NoneNo IPR availablePANTHERPTHR12309SEC61 GAMMA SUBUNITcoord: 1..68
NoneNo IPR availablePANTHERPTHR12309:SF5PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMAcoord: 1..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..69
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1106contigF-serratus_M_contig1106:94474..100587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1106.992.1mRNA_F-serratus_M_contig1106.992.1Fucus serratus malemRNAF-serratus_M_contig1106 94424..101160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1106.992.1 ID=prot_F-serratus_M_contig1106.992.1|Name=mRNA_F-serratus_M_contig1106.992.1|organism=Fucus serratus male|type=polypeptide|length=70bp
MSDVNELLIIPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGF
IGFFVKLIHIPINNIIMGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008158Translocase_Sec61-g
IPR023391Prot_translocase_SecE_dom_sf
IPR001901Translocase_SecE/Sec61-g