prot_F-serratus_M_contig1106.1000.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1106.1000.1
Unique Nameprot_F-serratus_M_contig1106.1000.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length94
Homology
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Match: A0A6H5J9V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V7_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 5.740e-36
Identity = 60/92 (65.22%), Postives = 78/92 (84.78%), Query Frame = 0
Query:    1 MSNKIAEAARRIFGNLPPSTVRTGNKVLRKNMIGRKVAEYYPQTTAPDLERLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRA 92
            M+  +AEAARRIFGNLP S VRTGNKVLRKN+IG+K+AEYYPQTT PD+ ++AEK IPGV+M+ ++EWR+ KR+LD+G     +KKG+GKR+
Sbjct:    1 MNKNVAEAARRIFGNLPHSNVRTGNKVLRKNIIGQKIAEYYPQTTVPDMVKMAEKEIPGVIMDHKREWRRQKRELDEGSKRGSSKKGEGKRS 92          
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Match: UPI00053F7A8F (28S ribosomal protein S33, mitochondrial n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F7A8F)

HSP 1 Score: 54.3 bits (129), Expect = 1.750e-7
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    5 IAEAARRIFGN-LPPSTVRTGNKVLRKNMIGRKVAEYYPQTTAPDLERLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRA 92
            + EA  +IFG+ L P++ R+ +KVLRK +IG KVAE+YP            KH   VVM +++E R  K ++ K +G    KKG GKRA
Sbjct:   19 VTEARAQIFGHVLNPTSQRSAHKVLRKKLIGEKVAEWYPYDI---------KHDDPVVMAQKEEERLSKLEMLKRRGKGPPKKGHGKRA 98          
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Match: UPI000B8CC3DE (uncharacterized protein LOC110824778 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CC3DE)

HSP 1 Score: 53.9 bits (128), Expect = 2.470e-7
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    5 IAEAARRIFGN-LPPSTVRTGNKVLRKNMIGRKVAEYYPQTTAPDLERLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRA 92
            + EA  RIFG+ L P+  R+ +K+LRK +IG KVA++YP     D           +VM RQ+E R  K ++ K +G    KKGQG+RA
Sbjct:   18 VTEARARIFGHMLNPTGQRSPHKILRKKLIGAKVADWYPYDIKKD---------DPIVMGRQEEERLSKLEMLKRRGKGAPKKGQGRRA 97          
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Match: A0A1U8AFN8_NELNU (uncharacterized protein LOC104599760 n=5 Tax=Proteales TaxID=232378 RepID=A0A1U8AFN8_NELNU)

HSP 1 Score: 53.5 bits (127), Expect = 3.410e-7
Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 0
Query:    3 NKIAEAARRIFGN-LPPSTVRTGNKVLRKNMIGRKVAEYYPQTTAPDLERLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRA 92
            N + EA  RIFG+ L P+  R+ +KVLRK +IG KVA++YP     D           +VM RQ++ R  K ++ K +G    KKGQG+RA
Sbjct:   15 NGVTEARARIFGHVLNPTGQRSPHKVLRKKLIGEKVAQWYPYDIKKD---------DPLVMARQEQERLSKLEMLKRRGKGPPKKGQGRRA 96          
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Match: A0A6P8DGZ4_PUNGR (uncharacterized protein LOC116207698 n=4 Tax=Punica granatum TaxID=22663 RepID=A0A6P8DGZ4_PUNGR)

HSP 1 Score: 53.5 bits (127), Expect = 3.490e-7
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    1 MSNKIAEAARRIFGN-LPPSTVRTGNKVLRKNMIGRKVAEYYPQTTAPDLERLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRA 92
            +S  + EA  RIFG+ L P+  R+ +K+LRK +IG KVA++YP     D           +VM RQ++ R  K ++ K +G    KKGQGKRA
Sbjct:   14 VSRGVTEARARIFGHMLNPTGQRSPHKILRKKLIGEKVAQWYPYDINKD---------DPLVMARQEQERLSKLEMLKRRGKGPPKKGQGKRA 97          
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Match: A0A803N8U6_CHEQI (Uncharacterized protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803N8U6_CHEQI)

HSP 1 Score: 53.5 bits (127), Expect = 3.570e-7
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    5 IAEAARRIFGNLPPSTV-RTGNKVLRKNMIGRKVAEYYPQTTAPDLERLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRA 92
            +AEA   IFG++   T  R+ +KVLRK +IG KVAE+YP            KH   ++M+RQ++ R  K  + K +G    KKGQG+RA
Sbjct:   19 VAEARAHIFGHVLNLTAQRSAHKVLRKKLIGDKVAEWYPYDV---------KHDDPLIMDRQQQERLSKNQMLKRRGKGPPKKGQGRRA 98          
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Match: A0A6P6AN03_DURZI (uncharacterized protein LOC111311063 n=5 Tax=Malvaceae TaxID=3629 RepID=A0A6P6AN03_DURZI)

HSP 1 Score: 52.8 bits (125), Expect = 6.960e-7
Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    5 IAEAARRIFGN-LPPSTVRTGNKVLRKNMIGRKVAEYYPQTTAPDLERLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRA 92
            + EA  RIFG+ L P+  R+ +K+LRK +IG KVAE+YP     D           +VM RQ+E R  K ++ K +G    KKGQG+RA
Sbjct:   18 VTEARARIFGHILNPTGQRSPHKILRKKLIGDKVAEWYPYDIKND---------DPLVMARQEEERLSKLEMLKRRGKGPPKKGQGRRA 97          
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Match: D7T9R4_VITVI (Uncharacterized protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=D7T9R4_VITVI)

HSP 1 Score: 52.8 bits (125), Expect = 6.960e-7
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    5 IAEAARRIFGN-LPPSTVRTGNKVLRKNMIGRKVAEYYPQTTAPDLERLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRA 92
            + EA  RIFG+ L P+  R+ +K+LRK +IG KVA++YP     D           +VM RQ++ R  K ++ K +G    KKGQGKRA
Sbjct:   18 VTEARARIFGHVLNPTGQRSPHKILRKKLIGEKVAQWYPYDIKKD---------DPLVMARQEQERLSKLEMLKRRGKGPPKKGQGKRA 97          
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Match: A0A5B7A9N6_DAVIN (Uncharacterized protein n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7A9N6_DAVIN)

HSP 1 Score: 52.4 bits (124), Expect = 9.830e-7
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    5 IAEAARRIFGN-LPPSTVRTGNKVLRKNMIGRKVAEYYPQTTAPDLERLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRA 92
            + EA  RIFG+ L P+  R+ +KVLRK +IG KVA++YP     D           +VM RQ++ R  K ++ K +G    KKG+GKRA
Sbjct:   18 VTEARARIFGHVLNPTGQRSAHKVLRKKLIGEKVAQWYPYDIKKD---------DPLVMARQEQERLSKLEMLKRRGKGPPKKGKGKRA 97          
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Match: A0A7J7C864_TRIWF (Mitochondrial isoform 1 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C864_TRIWF)

HSP 1 Score: 52.0 bits (123), Expect = 1.390e-6
Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    5 IAEAARRIFGN-LPPSTVRTGNKVLRKNMIGRKVAEYYPQTTAPDLERLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRA 92
            + EA  RIFG+ L P+  R+ +K+LRK +IG KVA +YPQ    D           +VM R+++ R  K ++ K +G    KKGQG+RA
Sbjct:   18 VTEARARIFGHVLNPTGQRSPHKILRKKLIGEKVAAWYPQDITKD---------DPLVMAREEQERLSKLEMLKRRGKGPPKKGQGRRA 97          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1106.1000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9V7_9PHAE5.740e-3665.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00053F7A8F1.750e-742.7028S ribosomal protein S33, mitochondrial n=1 Tax=B... [more]
UPI000B8CC3DE2.470e-741.57uncharacterized protein LOC110824778 n=1 Tax=Caric... [more]
A0A1U8AFN8_NELNU3.410e-741.76uncharacterized protein LOC104599760 n=5 Tax=Prote... [more]
A0A6P8DGZ4_PUNGR3.490e-740.86uncharacterized protein LOC116207698 n=4 Tax=Punic... [more]
A0A803N8U6_CHEQI3.570e-741.57Uncharacterized protein n=2 Tax=Chenopodium quinoa... [more]
A0A6P6AN03_DURZI6.960e-742.70uncharacterized protein LOC111311063 n=5 Tax=Malva... [more]
D7T9R4_VITVI6.960e-741.57Uncharacterized protein n=2 Tax=Vitis vinifera Tax... [more]
A0A5B7A9N6_DAVIN9.830e-741.57Uncharacterized protein n=2 Tax=Davidia involucrat... [more]
A0A7J7C864_TRIWF1.390e-640.45Mitochondrial isoform 1 n=2 Tax=Tripterygium wilfo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013219Ribosomal protein S27/S33, mitochondrialPFAMPF08293MRP-S33coord: 3..86
e-value: 4.6E-12
score: 46.0
IPR013219Ribosomal protein S27/S33, mitochondrialPANTHERPTHR13362MITOCHONDRIAL RIBOSOMAL PROTEIN S33coord: 3..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1106contigF-serratus_M_contig1106:264528..272928 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1106.1000.1mRNA_F-serratus_M_contig1106.1000.1Fucus serratus malemRNAF-serratus_M_contig1106 263849..273427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1106.1000.1 ID=prot_F-serratus_M_contig1106.1000.1|Name=mRNA_F-serratus_M_contig1106.1000.1|organism=Fucus serratus male|type=polypeptide|length=94bp
MSNKIAEAARRIFGNLPPSTVRTGNKVLRKNMIGRKVAEYYPQTTAPDLE
RLAEKHIPGVVMNRQKEWRQWKRDLDKGKGVTKAKKGQGKRAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013219Ribosomal_S27/S33_mit