prot_F-serratus_M_contig1105.980.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1105.980.1
Unique Nameprot_F-serratus_M_contig1105.980.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length286
Homology
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BLAST of mRNA_F-serratus_M_contig1105.980.1 vs. uniprot
Match: D8LJS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJS0_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 4.330e-36
Identity = 197/315 (62.54%), Postives = 213/315 (67.62%), Query Frame = 0 
Query:    1 MSLAPGWAAYKAADGKEYYHNSSTNQTTWDRPSAPAPXXXXRAAPPLPSKSPGSGFFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASIRGGAALKPASTADKSVARGAGGVVGGXXXRGXXXXXXXXXXPAASYSAPXXXXXXXXXXXXMMGELANAMARRSMGXXXXXXXXXXXXXXX----GVGMRSPPPRAAAPTPGQ-RASLP---GRPGAGAPXXXXXXXXXXXXKSANGSSSWGAPSPSISVPP----VGGGYGSGPV------------------SAVGAGGGSDGDRLAAIETKLDKIMRHLQIS 285
            MSLAPGW AYKAADGKEY+HN++TNQTTWDRP+A AP    +AAPPLPSK       GXXXXXXXXXXXXXXXXXXXXXXXXXX  LASIRGGA+LK A T DKS+ARGAG V GGXXX  XXXXXXXXXX         XXXXXXXXXXXMMGELANAMARR      XXXXXXXXXXXX    G G RSPPP   AP PG+    +P   GR      XXXXXXXXXXXX     +SSWG PS + S P      GGGYGS                     S+   GG S+ DRLAAIE KLDKIM+HL+I+
Sbjct:    1 MSLAPGWTAYKAADGKEYFHNATTNQTTWDRPTA-APAIP-KAAPPLPSKP-----SGXXXXXXXXXXXXXXXXXXXXXXXXXXDLLASIRGGASLKKAETVDKSIARGAGTVSGGXXXXXXXXXXXXXXX---------XXXXXXXXXXXMMGELANAMARRKSSGPGXXXXXXXXXXXXXXXGGPGGRSPPPSMPAPMPGRGMGGMPMPGGRXXXXXXXXXXXXXXXXXXXXXXXASSWGGPSAASSAPAXAAGAGGGYGSNXXXXXXXXXXXXXXXXXASSSSSARGGVSESDRLAAIEAKLDKIMQHLRIA 299
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BLAST of mRNA_F-serratus_M_contig1105.980.1 vs. uniprot
Match: A0A1V9ZPD7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZPD7_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 9.080e-6
Identity = 25/46 (54.35%), Postives = 29/46 (63.04%), Query Frame = 0 
Query:    1 MSLAPGWAAYKAADGKEYYHNSSTNQTTWDRPSAPAPXXXXRAAPP 46
            MSL P W AYK  DGKEY++NS T  TTWDRP+  A     +A  P
Sbjct:    1 MSLPPNWTAYKTQDGKEYFYNSQTKVTTWDRPAPVAVERKPKAEAP 46
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BLAST of mRNA_F-serratus_M_contig1105.980.1 vs. uniprot
Match: A0A813BDH8_9DINO (Protein YIPF (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813BDH8_9DINO)

HSP 1 Score: 55.1 bits (131), Expect = 3.900e-5
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0 
Query:    1 MSLAPGWAAYKAADGKEYYHNSSTNQTTWDRP 32
            MSL P W+ Y   +GKEYYHNSSTNQT W++P
Sbjct:    1 MSLPPNWSKYTTDEGKEYYHNSSTNQTQWEKP 32
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BLAST of mRNA_F-serratus_M_contig1105.980.1 vs. uniprot
Match: A0A1Q9EUE1_SYMMI (Protein YIPF1 n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EUE1_SYMMI)

HSP 1 Score: 55.1 bits (131), Expect = 7.330e-5
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0 
Query:    1 MSLAPGWAAYKAADGKEYYHNSSTNQTTWDRP 32
            MSL P W+ Y   +GKEYYHNSSTNQT W++P
Sbjct:  370 MSLPPNWSKYATDEGKEYYHNSSTNQTQWEKP 401
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1105.980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJS0_ECTSI4.330e-3662.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V9ZPD7_9STRA9.080e-654.35Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A813BDH8_9DINO3.900e-565.63Protein YIPF (Fragment) n=1 Tax=Symbiodinium necro... [more]
A0A1Q9EUE1_SYMMI7.330e-565.63Protein YIPF1 n=3 Tax=Symbiodinium TaxID=2949 RepI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 2..34
e-value: 2.9E-8
score: 43.5
IPR001202WW domainPFAMPF00397WWcoord: 3..32
e-value: 8.1E-11
score: 41.8
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 7..32
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 1..34
score: 14.127
NoneNo IPR availableGENE3D2.20.70.10coord: 6..34
e-value: 2.4E-11
score: 44.8
IPR003124WH2 domainPROSITEPS51082WH2coord: 82..99
score: 7.657
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 3..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1105contigF-serratus_M_contig1105:87838..101883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1105.980.1mRNA_F-serratus_M_contig1105.980.1Fucus serratus malemRNAF-serratus_M_contig1105 87827..101937 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1105.980.1 ID=prot_F-serratus_M_contig1105.980.1|Name=mRNA_F-serratus_M_contig1105.980.1|organism=Fucus serratus male|type=polypeptide|length=286bp
MSLAPGWAAYKAADGKEYYHNSSTNQTTWDRPSAPAPAPAPRAAPPLPSK
SPGSGFFGGGSKKSNGGAGGRGGGGGGATAAPPPDLLASIRGGAALKPAS
TADKSVARGAGGVVGGGGARGSGGGGDGGGGPAASYSAPAPRPMPGAGGG
GMMGELANAMARRSMGSGSPPPVPFSAPAPSGVGMRSPPPRAAAPTPGQR
ASLPGRPGAGAPPIPGKAPPPLPTKSANGSSSWGAPSPSISVPPVGGGYG
SGPVSAVGAGGGSDGDRLAAIETKLDKIMRHLQIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR003124WH2_dom
IPR036020WW_dom_sf