prot_F-serratus_M_contig1103.968.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1103.968.1
Unique Nameprot_F-serratus_M_contig1103.968.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length99
Homology
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Match: D8LN84_ECTSI (Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN84_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 4.730e-58
Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQ 94
            MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEY AMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITD GDSDILRQ
Sbjct:   14 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQ 107          
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Match: A0A835YXX2_9STRA (Ribosomal protein rpl30 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX2_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.150e-49
Identity = 77/98 (78.57%), Postives = 89/98 (90.82%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQTIDV 98
            +N RLQLVM+SGKASLGYK T+K MR+++AKM++ISNNCPPLRKSEIEY A+LAKC VHHY+GSNTDLGTACGKYFRVSVL+ITD GDSDILR   +V
Sbjct:   14 INTRLQLVMRSGKASLGYKQTLKCMRTSKAKMIIISNNCPPLRKSEIEYYALLAKCNVHHYSGSNTDLGTACGKYFRVSVLAITDAGDSDILRTVPEV 111          
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Match: A0A812PA55_SYMMI (RPL30 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PA55_SYMMI)

HSP 1 Score: 156 bits (394), Expect = 1.620e-47
Identity = 72/93 (77.42%), Postives = 89/93 (95.70%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILR 93
            +N+RLQLVM+SGKASLGYK+TIK++R+T+AK+V+IS+NCPPLRKSEIEY AMLAKC VHHY G+N+DLGTACGK++RVS+LS+TD GDSDILR
Sbjct:   16 INSRLQLVMRSGKASLGYKTTIKTLRNTKAKLVIISSNCPPLRKSEIEYYAMLAKCTVHHYAGTNSDLGTACGKFYRVSMLSVTDGGDSDILR 108          
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Match: L8GX53_ACACA (60S ribosomal protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX53_ACACA)

HSP 1 Score: 153 bits (386), Expect = 2.680e-46
Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQ 94
            +N+RL LVMKSGK +LGYKST+KS+R  +AK+++IS NCPPLRKSEIEY AMLAK  VHHYTG+N DLGTACGKYFRVS LSITDPGDSDI+RQ
Sbjct:   14 INSRLALVMKSGKYTLGYKSTLKSLRQGKAKLIIISTNCPPLRKSEIEYYAMLAKTGVHHYTGNNIDLGTACGKYFRVSSLSITDPGDSDIIRQ 107          
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Match: A0A482SS92_9ARCH (50S ribosomal protein L30e n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS92_9ARCH)

HSP 1 Score: 150 bits (380), Expect = 2.650e-45
Identity = 68/93 (73.12%), Postives = 87/93 (93.55%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILR 93
            +N ++QLVMKSGK +LGYK+T+K++RS +AKMV+ISNN P LRKSE+EY AMLAKC++HHY+G+N+DLGTACGK+FRVS++SITDPGDSDILR
Sbjct:   23 INGKIQLVMKSGKTALGYKTTLKALRSNKAKMVVISNNTPTLRKSEVEYYAMLAKCSIHHYSGNNSDLGTACGKFFRVSMMSITDPGDSDILR 115          
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Match: A0A6S7GSE1_PARCT (60S ribosomal protein L30 n=4 Tax=Alcyonacea TaxID=40677 RepID=A0A6S7GSE1_PARCT)

HSP 1 Score: 149 bits (375), Expect = 1.480e-44
Identity = 72/93 (77.42%), Postives = 84/93 (90.32%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILR 93
            +N+RLQLVMKSGK +LGYKST+K++R  +AK+V+ISNN P LRKSEIEY AMLAK  VHHYTG+N +LGTACGKYFRVSVLSITDPGDSDI+R
Sbjct:   14 INSRLQLVMKSGKYTLGYKSTLKTLRQGKAKLVIISNNTPQLRKSEIEYYAMLAKTGVHHYTGNNIELGTACGKYFRVSVLSITDPGDSDIIR 106          
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Match: A0A7S1A6B9_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A6B9_NOCSC)

HSP 1 Score: 148 bits (374), Expect = 1.860e-44
Identity = 70/93 (75.27%), Postives = 85/93 (91.40%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILR 93
            +N RL+LVMKSGK +LG+KST+K++R+ +AK+VLI++NCPPLRKSEIEY AML+K  VHHYTG N +LGTACGKYFRVSVLSITDPGDSDI+R
Sbjct:   15 INTRLKLVMKSGKYNLGHKSTMKTLRNGKAKLVLIASNCPPLRKSEIEYYAMLSKTGVHHYTGENNELGTACGKYFRVSVLSITDPGDSDIIR 107          
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Match: L1JC58_GUITC (Large subunit ribosomal protein L30e, cytoplasmic n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JC58_GUITC)

HSP 1 Score: 148 bits (373), Expect = 2.410e-44
Identity = 70/93 (75.27%), Postives = 84/93 (90.32%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILR 93
            +N+RL LVMKSGK +LGYKST+K++RS ++K+V+I NNCPPLRKSEIEY AMLAK  VHHY+G+N DLGTACGKYFRV+ LSITDPGDSDI+R
Sbjct:   12 INSRLALVMKSGKYTLGYKSTLKTLRSGKSKLVIICNNCPPLRKSEIEYYAMLAKTNVHHYSGNNVDLGTACGKYFRVASLSITDPGDSDIIR 104          
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Match: A0A0D2NS00_9CHLO (60S ribosomal protein L30 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2NS00_9CHLO)

HSP 1 Score: 147 bits (372), Expect = 3.540e-44
Identity = 67/95 (70.53%), Postives = 86/95 (90.53%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQT 95
            +N+RL LVMKSGK +LGYK+ +K++RS +AK++++S+NCPP+RKSEIEY AML+K  VHHYTG+N DLGTACGKYFRVSVL+ITDPGDSDI++ T
Sbjct:   16 INSRLALVMKSGKYTLGYKTCLKTLRSGKAKLIIVSSNCPPVRKSEIEYYAMLSKTGVHHYTGNNVDLGTACGKYFRVSVLAITDPGDSDIIKTT 110          
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Match: A0A061SCJ0_9CHLO (Large subunit ribosomal protein L30e n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SCJ0_9CHLO)

HSP 1 Score: 147 bits (372), Expect = 3.650e-44
Identity = 67/97 (69.07%), Postives = 87/97 (89.69%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQTID 97
            +N+RLQLVMKSGK +LGYK+ +KS+RS ++K+++ISNNCPPLRKSEIEY AML+K  VHH+ G+N +LGTACG+Y+RVS+LSITDPGDSDI++ T D
Sbjct:   16 INSRLQLVMKSGKYTLGYKTCLKSLRSGKSKLIIISNNCPPLRKSEIEYYAMLSKTGVHHFAGNNVELGTACGRYYRVSMLSITDPGDSDIIKTTSD 112          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1103.968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN84_ECTSI4.730e-5897.87Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YXX2_9STRA1.150e-4978.57Ribosomal protein rpl30 n=1 Tax=Tribonema minus Ta... [more]
A0A812PA55_SYMMI1.620e-4777.42RPL30 protein n=1 Tax=Symbiodinium microadriaticum... [more]
L8GX53_ACACA2.680e-4677.6660S ribosomal protein, putative n=1 Tax=Acanthamoe... [more]
A0A482SS92_9ARCH2.650e-4573.1250S ribosomal protein L30e n=1 Tax=archaeon TaxID=... [more]
A0A6S7GSE1_PARCT1.480e-4477.4260S ribosomal protein L30 n=4 Tax=Alcyonacea TaxID... [more]
A0A7S1A6B9_NOCSC1.860e-4475.27Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
L1JC58_GUITC2.410e-4475.27Large subunit ribosomal protein L30e, cytoplasmic ... [more]
A0A0D2NS00_9CHLO3.540e-4470.5360S ribosomal protein L30 n=1 Tax=Monoraphidium ne... [more]
A0A061SCJ0_9CHLO3.650e-4469.07Large subunit ribosomal protein L30e n=1 Tax=Tetra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 2..92
e-value: 1.8E-22
score: 78.9
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..94
e-value: 9.6E-47
score: 158.7
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 2..93
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 1..95
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 67..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1103contigF-serratus_M_contig1103:29323..29619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1103.968.1mRNA_F-serratus_M_contig1103.968.1Fucus serratus malemRNAF-serratus_M_contig1103 29305..29619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1103.968.1 ID=prot_F-serratus_M_contig1103.968.1|Name=mRNA_F-serratus_M_contig1103.968.1|organism=Fucus serratus male|type=polypeptide|length=99bp
MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYL
AMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQTIDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like
IPR039109L30/L30e/YlxQ
IPR022991Ribosomal_L30e_CS