prot_F-serratus_M_contig1102.965.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1102.965.1
Unique Nameprot_F-serratus_M_contig1102.965.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length72
Homology
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Match: A0A6H5K2W4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2W4_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 9.030e-12
Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    2 KDGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI 71
            K+G+++  + +L A+GF Q+  V Y    SP PS+ SI+++LA A  K   L H+D EQA+  A +DEE+
Sbjct:   39 KEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVEQAYTHATLDEEV 108          
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Match: A5AWA1_VITVI (Integrase catalytic domain-containing protein n=7 Tax=Vitis vinifera TaxID=29760 RepID=A5AWA1_VITVI)

HSP 1 Score: 68.2 bits (165), Expect = 1.090e-11
Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    3 DGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI 71
            DG +E  + +L A+GF Q+EGV Y + +SPT   +S+R LLA AAA+   +   D   AFL  D+ EEI
Sbjct: 1043 DGSIERYKARLVAKGFTQLEGVDYQDTFSPTAKIISVRCLLALAAARGXSIHQMDVNNAFLHGDLHEEI 1111          
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Match: A0A438H416_VITVI (Copia protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438H416_VITVI)

HSP 1 Score: 67.8 bits (164), Expect = 1.450e-11
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    3 DGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI 71
            DG +E  + +L A+GF Q+EGV Y + +SPT   +++R LLA AAA+   L   D + AFL +D+ EEI
Sbjct:  438 DGSIERYKTRLVAKGFTQLEGVDYQDTFSPTTKIITVRCLLALAAARRWSLHQLDVDNAFLHSDLHEEI 506          
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Match: A0A438G6Q5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438G6Q5_VITVI)

HSP 1 Score: 67.8 bits (164), Expect = 1.470e-11
Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    3 DGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI 71
            DG +E  + +L A+GF Q+EGV Y + +SPT   +S+R LLA AAA+   +   D   AFL  D+ EEI
Sbjct:  495 DGSIERYKARLVAKGFTQLEGVDYQDTFSPTAKIISVRCLLALAAARGWSIHQMDVNNAFLHGDLHEEI 563          
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Match: UPI0008FFCACA (uncharacterized protein LOC100253049 isoform X3 n=2 Tax=Vitis vinifera TaxID=29760 RepID=UPI0008FFCACA)

HSP 1 Score: 67.8 bits (164), Expect = 1.480e-11
Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    3 DGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI 71
            DG +E  + +L A+GF Q+EGV Y + +SPT   +S+R LLA AAA+   +   D   AFL  D+ EEI
Sbjct:  590 DGSIERYKARLVAKGFTQLEGVDYQDTFSPTAKIISVRCLLALAAARGWSIHQMDVNNAFLHGDLHEEI 658          
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Match: UPI0008FF9195 (uncharacterized protein LOC100253049 isoform X2 n=1 Tax=Vitis vinifera TaxID=29760 RepID=UPI0008FF9195)

HSP 1 Score: 67.8 bits (164), Expect = 1.480e-11
Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    3 DGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI 71
            DG +E  + +L A+GF Q+EGV Y + +SPT   +S+R LLA AAA+   +   D   AFL  D+ EEI
Sbjct:  590 DGSIERYKARLVAKGFTQLEGVDYQDTFSPTAKIISVRCLLALAAARGWSIHQMDVNNAFLHGDLHEEI 658          
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Match: A0A438BZ53_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BZ53_VITVI)

HSP 1 Score: 67.8 bits (164), Expect = 1.490e-11
Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    3 DGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI 71
            DG +E  + +L A+GF Q+EGV Y + +SPT   +S+R LLA AAA+   +   D   AFL  D+ EEI
Sbjct:  833 DGSIERYKARLVAKGFTQLEGVDYQDTFSPTAKIISVRCLLALAAARGWSIHQMDVNNAFLHGDLHEEI 901          
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Match: A0A438J5Z1_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J5Z1_VITVI)

HSP 1 Score: 67.4 bits (163), Expect = 1.900e-11
Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 0
Query:    3 DGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI 71
            DG +E  + +L A+GF Q+EGV Y + +SPT   +SIR LLA AAA+   L   D    FL  D+ EEI
Sbjct:   39 DGSIERYKARLVAKGFTQLEGVDYQDTFSPTAKIISIRCLLALAAARGWSLHQMDVNNVFLHGDLHEEI 107          
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Match: A0A7N2LIL0_QUELO (Integrase catalytic domain-containing protein n=2 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2LIL0_QUELO)

HSP 1 Score: 67.4 bits (163), Expect = 2.040e-11
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    3 DGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI 71
            DG VE  + +L A+G+ Q EG+ + E +SP    VS+R+LLA AAAK   L   D   AFL  D+DEE+
Sbjct: 1167 DGSVERYKARLVAKGYTQREGLDFLETFSPVAKTVSVRVLLALAAAKSWPLHQLDINNAFLHGDLDEEV 1235          
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Match: A0A5H2XTU8_PRUDU (RmlC-like cupins superfamily protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XTU8_PRUDU)

HSP 1 Score: 67.0 bits (162), Expect = 2.730e-11
Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    3 DGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKDGELRHFDAEQAFLKADIDEEI 71
            DG +E  + +L A+G+ Q+EG+ Y + +SPT   +++R LLA AAA+D  L   D   AFL  D+ EEI
Sbjct:  185 DGTIERYKARLVAKGYKQLEGIDYHDTFSPTAKMITVRCLLALAAAQDWSLHQLDVNNAFLHGDLHEEI 253          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1102.965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2W4_9PHAE9.030e-1241.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A5AWA1_VITVI1.090e-1144.93Integrase catalytic domain-containing protein n=7 ... [more]
A0A438H416_VITVI1.450e-1144.93Copia protein n=1 Tax=Vitis vinifera TaxID=29760 R... [more]
A0A438G6Q5_VITVI1.470e-1144.93Retrovirus-related Pol polyprotein from transposon... [more]
UPI0008FFCACA1.480e-1144.93uncharacterized protein LOC100253049 isoform X3 n=... [more]
UPI0008FF91951.480e-1144.93uncharacterized protein LOC100253049 isoform X2 n=... [more]
A0A438BZ53_VITVI1.490e-1144.93Retrovirus-related Pol polyprotein from transposon... [more]
A0A438J5Z1_VITVI1.900e-1146.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A7N2LIL0_QUELO2.040e-1146.38Integrase catalytic domain-containing protein n=2 ... [more]
A0A5H2XTU8_PRUDU2.730e-1143.48RmlC-like cupins superfamily protein n=1 Tax=Prunu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..71
e-value: 6.4E-12
score: 45.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1102contigF-serratus_M_contig1102:73233..73448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1102.965.1mRNA_F-serratus_M_contig1102.965.1Fucus serratus malemRNAF-serratus_M_contig1102 73146..73463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1102.965.1 ID=prot_F-serratus_M_contig1102.965.1|Name=mRNA_F-serratus_M_contig1102.965.1|organism=Fucus serratus male|type=polypeptide|length=72bp
MKDGEVENCRCQLTAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAAKD
GELRHFDAEQAFLKADIDEEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2