prot_F-serratus_M_contig1100.962.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1100.962.1
Unique Nameprot_F-serratus_M_contig1100.962.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length154
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1100.962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 28..47
e-value: 2.3E-4
score: 18.9
coord: 114..130
e-value: 4.5E-4
score: 18.0
coord: 57..73
e-value: 1.0E-4
score: 20.0
coord: 2..17
e-value: 8.5E-5
score: 20.2
coord: 86..103
e-value: 0.0021
score: 15.8
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 59..73
e-value: 0.078
score: 13.5
coord: 2..17
e-value: 0.0019
score: 18.5
coord: 116..130
e-value: 0.07
score: 13.6
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 3..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1100contigF-serratus_M_contig1100:7190..26647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1100.962.1mRNA_F-serratus_M_contig1100.962.1Fucus serratus malemRNAF-serratus_M_contig1100 7190..26647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1100.962.1 ID=prot_F-serratus_M_contig1100.962.1|Name=mRNA_F-serratus_M_contig1100.962.1|organism=Fucus serratus male|type=polypeptide|length=154bp
RVSFFNNQAASDGGAIYLYDESVFNSYGTVSFVSNEAGDDGGAIAAGYGN
QLSLIAIASFEGNQAFDNGGAIYLVFYSELNVTEGGTVSFLNNHAGDDGG
AVFIADDSNASFGGETVFADNTAKDGGAIYIFRNSEGNFTGNVWFEGNHA
NDSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence