prot_F-serratus_M_contig11.925.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig11.925.1
Unique Nameprot_F-serratus_M_contig11.925.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length430
Homology
BLAST of mRNA_F-serratus_M_contig11.925.1 vs. uniprot
Match: D7G1G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G0_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 1.710e-56
Identity = 135/257 (52.53%), Postives = 157/257 (61.09%), Query Frame = 0
Query:  175 RPDELEGVVRVAFSGM-----------VRSLSKKRKNTPPGSRVCNSEGEAFTHLVIPDESRRTLKVLFALCAPPGPNGKPPAVVTVAWLYASLEAGYFVDAETFRPARYRGPS--------SSTGNSGKNEGKPEGLHSISSRLLTGERVMVGGVADPPPDVVEKLARAAGAEITRSLREATVLLVGSEHELQEWVDGEKAAVSAYH---------TSSKKHRVEGKVQGRGRN-LAPSTASSRNASLLSRGVGGG 402
            R D+L+GVVRV FSG+           VRSLSK  +  P GS VC S+ EA+THLVIPD SRRTLKVLFALCAP  PNG+PP VVTVAWLY SLE G+FVD+E FRP RYRGP+           G S    G  +   SISS LL GERVM+GG+ADPPP VVE LA A G +IT  L +AT+LL  +E  L+ WV+ +K   ++            S    R  G   G GR  L  STASSRNAS   RG  GG
Sbjct: 1595 RSDKLQGVVRVVFSGLQPGDRQAAASVVRSLSKTHR--PHGSGVCMSDAEAYTHLVIPDVSRRTLKVLFALCAPLSPNGRPPVVVTVAWLYESLEKGFFVDSEAFRPDRYRGPALEGGSVEGPEEGGSATAAGATKESRSISSSLLQGERVMLGGIADPPPSVVETLALATGGQITHCLHDATLLLAETETALEAWVEQQKKPEASXXXXXXSGSRGVSKISARPGGNSIGTGRRGLGASTASSRNAS---RGAAGG 1846          
BLAST of mRNA_F-serratus_M_contig11.925.1 vs. uniprot
Match: A0A6H5JHC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC6_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 8.860e-53
Identity = 140/288 (48.61%), Postives = 162/288 (56.25%), Query Frame = 0
Query:  175 RPDELEGVVRVAFSGM-----------VRSLSKKRKNTPPGSRVCNSEGEAFTHLVIPDESRRTLKVLFALCAPPGPNGKPPAVVTVAWLYASLEAGYFVDAETFRPARYRGPSSSTGNSGKNEGKPEGL-----------HSISSRLLTGERVMVGGVADPPPDVVEKLARAAGAEITRSLREATVLLVGSEHELQEWVDGEKAAVSAYHTSSKKHRVEGKVQ---GRG--------RNLAPSTASSRNASLLSRGVGGGDSKAVSSVIFDEKFGGKGKKRGLAEVG 429
            R D+L+GVVRVAFSGM           VRSLS  R + P GS VC S+ EA+THLVIPD SRRTLKVLFALCAP  PNG+PP VVTVAWLY SLE G+FVD+E FRP RYRG +   G+    EG  EG+            SISS LL GERVM+GG+ DPPP VVE LA A G  IT  + +AT+LL  +E  L+ WV+ +                 G  +   G G        R L  STASSRNAS   RG  GG    +          GKGK R  A  G
Sbjct: 1845 RNDKLQGVVRVAFSGMQPGDRQAAASVVRSLS--RTHRPHGSGVCTSDAEAYTHLVIPDVSRRTLKVLFALCAPLSPNGRPPVVVTVAWLYESLEKGFFVDSEAFRPDRYRGLALEGGSV---EGPEEGVSATAAGATKESRSISSNLLQGERVMLGGIVDPPPSVVENLAVATGGLITHCIHDATLLLAETEIALEAWVEQQXXXXXXXXXXXXXXXSRGVAKISAGPGGNSIGTSRRGLGASTASSRNAS---RGAAGGRRGVL----------GKGKGRAAAGPG 2114          
BLAST of mRNA_F-serratus_M_contig11.925.1 vs. uniprot
Match: A0A3R7J6F5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J6F5_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.760e-5
Identity = 45/166 (27.11%), Postives = 76/166 (45.78%), Query Frame = 0
Query:  178 ELEGVVRVAFSGMVRSLSKKRKNTPPGSRVCNSEGEA--FTHLVIPDESRRTLKVLFALCAPPGPNGKPPAVVTVAWLYASLEAGYFVDAETFRPARYRGPSSSTGNSGKNEGKPEGLHSISSRLLTGERVMVGGVADPPPDVVEKLARAAGAEITRSLREATVLL 341
            E  GV+  A   +  ++S +  +    +RV  S   A   THL++  E+RRT+KVLFA+        +   +VT  W + SLE   ++  E F  + +               K   LH  S ++  G ++ VG  A+P  +V++ L + AG EI   +  A + +
Sbjct:   13 EARGVLECAIHAIDANMSNESGHRK--ARVVKSVDYAAGVTHLIVGKETRRTMKVLFAIA-------RGAWIVTEGWAFTSLEQERWLPEEDFELSLFAN-------------KFSRLHPESRQVFKGMKLFVGSNAEPSREVLQSLIQVAGGEICNQISVADMCI 156          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig11.925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1G0_ECTSI1.710e-5652.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHC6_9PHAE8.860e-5348.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3R7J6F5_9STRA2.760e-527.11Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 177..276
e-value: 1.1E-8
score: 37.0
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 204..270
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 204..270
score: 9.584

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig11contigF-serratus_M_contig11:1020276..1086573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig11.925.1mRNA_F-serratus_M_contig11.925.1Fucus serratus malemRNAF-serratus_M_contig11 1020275..1086573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig11.925.1 ID=prot_F-serratus_M_contig11.925.1|Name=mRNA_F-serratus_M_contig11.925.1|organism=Fucus serratus male|type=polypeptide|length=430bp
PRGGRGRKDGQGCSPAAARSPKRRGEAGARGRGSSRGGRASSRGGGARRQ
PGEIEASDGRKRRKTSAAGAAGVDVKATKDQQNRKITKNHNNEKKEKEEA
PPRERIAAADGGGKDCGSVAAGRGDSNAKKKNKHEDKVKKKRKNAAGKRN
KGDNGGGGNRRGGGATGDGGNGGRRPDELEGVVRVAFSGMVRSLSKKRKN
TPPGSRVCNSEGEAFTHLVIPDESRRTLKVLFALCAPPGPNGKPPAVVTV
AWLYASLEAGYFVDAETFRPARYRGPSSSTGNSGKNEGKPEGLHSISSRL
LTGERVMVGGVADPPPDVVEKLARAAGAEITRSLREATVLLVGSEHELQE
WVDGEKAAVSAYHTSSKKHRVEGKVQGRGRNLAPSTASSRNASLLSRGVG
GGDSKAVSSVIFDEKFGGKGKKRGLAEVGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR001357BRCT_dom