prot_F-serratus_M_contig1093.859.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1093.859.1
Unique Nameprot_F-serratus_M_contig1093.859.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length272
Homology
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Match: D7FZH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH3_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 3.380e-53
Identity = 96/212 (45.28%), Postives = 134/212 (63.21%), Query Frame = 0
Query:   65 AEVVGKGRVELSNT------DTAAMSLGDVRGGVDRSPRAEKGRAIPQRALEGYQRSLERRPIITKGISSGIIAASANFMQQTLSEVAFSLPDWTAFTMIGTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGLDSTIGAATVNSGVFAINTVLVTAFTGRVSSLSELWSAVRHRVSSNFLTMMTQNLKLWPWVAFVNFRFVPA 270
            A  +GK    ++N       D +    G   GG        KGR +  R    Y  +LE RP++TK +SSG+I+ +AN ++QTLS  AFSL DW+AFT++G  ++G  LH W+ FL+R+  S+ + +RIKSK G+VVLQV LD TIGA+ VNSG FA +TV +   TGR   L EL S++  +V+S ++ MM  N +LWPWV+FVNF F+PA
Sbjct:   56 AAALGKVETTMTNAAEALPADASRFQAGGASGGGVEDAGKIKGRGV-SRMWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWSAFTLVGAVFIGTVLHHWYGFLERMGNSEVITSRIKSKWGRVVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPA 266          
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Match: A0A7M3QA12_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3QA12_SPIER)

HSP 1 Score: 73.6 bits (179), Expect = 3.260e-11
Identity = 54/174 (31.03%), Postives = 82/174 (47.13%), Query Frame = 0
Query:  103 AIPQRALEGYQRSLERRPIITKGISSGIIAASANFMQQTLSEVAFSLPDW-----TAFTMIGTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGLDSTIGAATVNSGVFAINTVLVTAFTGRVSSLSELWSA--VRHRVSSNFLTMMTQNLKLWPWVAFVNFRFVP 269
            A+  R   GY R L + P  T+G+S+ +I    + + QTL E      +W       F  IG  ++GP LH W+SF+D+L + K V   +K         V  D  + A    S +F I  + +  FT         W A   R  +S+++L+ +  N K+WP   F+NF FVP
Sbjct:  236 ALVNRLWSGYNRLLVKYPYRTQGVSTAVIMGCGDIIAQTLIE---RRSEWDFARTAKFGSIGLLFVGPALHTWYSFVDKLYRGKGVVRTLK--------MVATDQLVMAP---SMIFCI--IGLVGFTRH-------WDAKEAREALSTSYLSAVLTNYKIWPATQFINFIFVP 386          
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Match: A0A0V0J4A0_SCHSO (Protein Mpv17 (Fragment) n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0V0J4A0_SCHSO)

HSP 1 Score: 70.9 bits (172), Expect = 4.480e-11
Identity = 54/169 (31.95%), Postives = 82/169 (48.52%), Query Frame = 0
Query:  103 AIPQRALEGYQRSLERRPIITKGISSGIIAASANFMQQTLSE--VAFSLPDWTAFTMIGTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGLDSTIGAATVNSGVFAINTVLVTAFTGRVSSLSELWSAVRHRVSSNFLTMMTQNLKLWPWVAFVNFRFVP 269
            A+  R  +GY R L + P  T+G+S+ II +  + + QTL E    + +     F  IG   +GP LH WFSFLDRL + K V    K         V  D  + A  +   +F I  + +  FT R   + E     +  +S++++  +  N K+WP   F+NF FVP
Sbjct:   14 AVINRLWKGYNRLLVKYPFRTQGVSTAIIMSCGDIITQTLIERRSEWDIGRTAKFGSIGLLLVGPVLHTWFSFLDRLYRGKGVVRTFK--------MVATDQLVMAPCM---IFCI--IGLVGFT-RHWDVKE----TKKTLSTSYVRAVLTNYKIWPATQFINFIFVP 164          
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Match: F0Y6G4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6G4_AURAN)

HSP 1 Score: 70.1 bits (170), Expect = 1.240e-10
Identity = 47/166 (28.31%), Postives = 78/166 (46.99%), Query Frame = 0
Query:  107 RALEGYQRSLERRPIITKGISSGIIAASANFMQQTLSEVAFSLPDWTAFTMIGTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGLDSTIGAATVNSGVFAINTVLVTAFTGRVSSLSELWSAVRHRVSSNFLTMMTQNLKLWPWVAFVNFRFVPAKF 272
            R +  Y   L R P+ TK  SSG+ +A  + + Q ++  AF      +F ++G  Y  P LH W+  L    + +  +     +   V+LQ+ L+ ++GA TVN+G F    V   A    +S  +      R  +   +L +M  N  +WP  + VN  FVP ++
Sbjct:   47 RLVAWYDAQLRRHPLRTKVASSGLASAVGDAVAQAVTGGAFDARRCASFALVGAAYFAPILHGWYEVLA--ARERRWRADGMGRWPSVLLQLLLNQSLGALTVNAGFFFALAVAEDALALDLSVRT--LEGARRALGDQYLLVMRANWLVWPLPSLVNLAFVPLRY 208          
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Match: A0A4S2LW41_OPIFE (Uncharacterized protein n=1 Tax=Opisthorchis felineus TaxID=147828 RepID=A0A4S2LW41_OPIFE)

HSP 1 Score: 65.9 bits (159), Expect = 2.140e-9
Identity = 48/167 (28.74%), Postives = 80/167 (47.90%), Query Frame = 0
Query:  108 ALEGYQRSLERRPIITKGISSGIIAASANFMQQTLSEVAFSLPDWTA--FTMIGTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGLDSTIGAATVNSGVFAINTVLVTAFTGRVSSLSELWSAVRHRVSSNFLTMMTQNLKLWPWVAFVNFRFVPAKF 272
            A   Y   L+R+P+I   +S+G++  SA+ + Q L E    L  +    F ++G+FYLGP L +W+ F+                  +V   V  D  I    +  GV ++ T+L      R  S+ ++W   + ++S N+ T++  N K+WP    VNF F+P  F
Sbjct:    8 AWYSYVNLLKRKPLIAHSLSTGVLMTSADALSQKLIEKKKRLDFYRNKNFLLVGSFYLGPCLSVWYRFIANFFTGHPTV--------KVAKLVCADQFIFTPPLLFGVLSLLTLL------RHRSV-DMW---KRQISENYSTVLLMNYKIWPVAQVVNFVFIPLPF 156          
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Match: A0A1Y1IBF0_KLENI (Mpv17 / PMP22 family domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBF0_KLENI)

HSP 1 Score: 65.5 bits (158), Expect = 2.700e-9
Identity = 46/165 (27.88%), Postives = 78/165 (47.27%), Query Frame = 0
Query:  108 ALEGYQRSLERRPIITKGISSGIIAASANFMQQTLSEVAFSLPDWTAFTMI-GTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGLDSTIGAATVNSGVFAINTVLVTAFTGRVSSLSELWSAVRHRVSSNFLTMMTQNLKLWPWVAFVNFRFVPAK 271
            A + Y  SL +RP+ITK I+SG +AA A+ + Q +       P  +A   + G  + GP  H +   +DR+  +K   + +  K+    L  G+   +   T  + V              V  L+  W+A + +V  ++  +  Q  KLWP VAF+N+ F+P +
Sbjct:    8 AWQRYLHSLGKRPLITKAITSGTLAAVADVLAQKMGGAKHLQPKKSALMAVYGLCFGGPTYHFFHKIMDRVFGAKTDPSTVIQKVVVEQLTFGVMYNLAILTYRAYV--------------VEGLT--WAATKAKVRRDYWGVQKQGWKLWPLVAFINYSFLPPQ 156          
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Match: A0A1Y1Y824_9FUNG (Uncharacterized protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y1Y824_9FUNG)

HSP 1 Score: 65.5 bits (158), Expect = 3.710e-9
Identity = 45/164 (27.44%), Postives = 76/164 (46.34%), Query Frame = 0
Query:  112 YQRSLERRPIITKGISSGIIAASANFMQQTLSEVAFSLPDWTA---FTMIGTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGLDSTIGAATVNSGVFAINTVLVTAFTGRVSSLSELWSAVRHRVSSNFLTMMTQNLKLWPWVAFVNFRFVPAKF 272
            Y R L ++PI+T+ +++G++ A  + + Q L E      D+         GT   GP   LW+ FLDR +         ++K  Q++ +V LD  I A    +G      +L        SS  E    ++ ++ + F+  +  N K+WP    +NF FVPA +
Sbjct:    8 YNRCLNKKPILTQSLTTGVMFALGDVIAQQLVEKRGKEHDYKRTGRMCFFGTCVAGPSTSLWYRFLDRHIV-------FQNKTQQLITRVFLDQCIYAPVFQAGYLGGTGIL------ERSSPEE----IKEKIKAGFMPALIANYKIWPAFQLINFNFVPANY 154          
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Match: A0A7S4ELP9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELP9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.610e-8
Identity = 49/168 (29.17%), Postives = 78/168 (46.43%), Query Frame = 0
Query:  108 ALEGYQRSLERRPIITKGISSGIIAASANFMQQTLSE-----VAFSLPDWTAFTMIGTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGLDSTIGAATVNS-GVFAINTVLVTAFTGRVSSLSELWSAVRHRVSSNFLTMMTQNLKLWPWVAFVNFRFVP 269
            A   Y +S    P  TKG++SGIIAA  + + Q + +      AFSL     F      + GPF+H+W++FL+ + Q    + R  S L +   Q+ LD T+G A      ++A N         R+ SLS+     R  +    +T      +++P+   +NF  VP
Sbjct:  109 AYRWYLKSCVETPFRTKGLTSGIIAALGDVIAQQIEKRTARAKAFSLSRVATFFFCNVLFTGPFIHMWYTFLNDVGQQMDKRFRNISNLKKTATQLFLDQTLGTAVFFPLYIYAYNVFESIIQMHRLPSLSDGTEKCRQHLWGIIMTQF----QVYPFSNMINFGLVP 272          
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Match: UPI0005400C54 (protein sym-1 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0005400C54)

HSP 1 Score: 63.5 bits (153), Expect = 2.800e-8
Identity = 48/170 (28.24%), Postives = 74/170 (43.53%), Query Frame = 0
Query:  109 LEGYQRSLERRPIITKGISSGIIAASANFMQQTLSEVAFSLPDWTAFTMI--------GTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGLDSTIGAATVNSGVFAINTVLVTAFTGRVSSLSELWSAVRHRVSSNFLTMMTQNLKLWPWVAFVNFRFVPA 270
            L+ Y   LE RP  TKGISS +I A+A+F  Q ++     LP   +F           G   +GP  H+WF+FL R++  + V T +K        ++ +   I    +NS  F+ N VL            E    V  R+  +    +   L  WP   F+ F+++P 
Sbjct:   61 LKWYLGMLETRPFTTKGISSSLIFAAADFTSQIIT-----LPPSGSFDSFRTLRIAGYGLLIMGPSQHVWFNFLSRILPGRDVFTTVK--------KITMGQAIYGPIMNSVFFSYNAVLQ----------GETREEVIARLKRDLFPTLRNGLMYWPLCDFLTFKYIPV 207          
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Match: A0A1Y2MAH0_EPING (Uncharacterized protein n=1 Tax=Epicoccum nigrum TaxID=105696 RepID=A0A1Y2MAH0_EPING)

HSP 1 Score: 62.4 bits (150), Expect = 4.500e-8
Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 0
Query:  108 ALEGYQRSLERRPIITKGISSGIIAASANFMQQTLSE---VAFSLPDWTAFTM-IGTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGLDSTIGAATVNSGVFAINTVLVTAFTGRVSSLSEL-WSAVRHRVSSNFLTMMTQNLKLWPWVAFVNFRFVPA 270
            A   YQ  L+  P+ T+ I++ ++  + + M Q L E   +    P  T   M  G    GP    W+  L + V          SK G +V +V  D  + A  VN G+F             +S+++ L  S+VR R++  ++  +T+N  +WPWV FVNF++VPA
Sbjct:    2 AFRWYQAKLKTAPLATQAITTAVLFGTGDAMAQHLVEKRGLENHDPKRTLRMMGYGGIIFGPAATKWYGLLTKHVN-------FASKNGTIVARVACDQLVFAP-VNMGLF-------------LSTMAYLEGSSVRDRLAQAYVPGLTKNFMVWPWVQFVNFKYVPA 148          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1093.859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZH3_ECTSI3.380e-5345.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7M3QA12_SPIER3.260e-1131.03Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
A0A0V0J4A0_SCHSO4.480e-1131.95Protein Mpv17 (Fragment) n=1 Tax=Schistocephalus s... [more]
F0Y6G4_AURAN1.240e-1028.31Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A4S2LW41_OPIFE2.140e-928.74Uncharacterized protein n=1 Tax=Opisthorchis felin... [more]
A0A1Y1IBF0_KLENI2.700e-927.88Mpv17 / PMP22 family domain containing protein n=1... [more]
A0A1Y1Y824_9FUNG3.710e-927.44Uncharacterized protein n=1 Tax=Neocallimastix cal... [more]
A0A7S4ELP9_9STRA2.610e-829.17Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
UPI0005400C542.800e-828.24protein sym-1 n=1 Tax=Beta vulgaris subsp. vulgari... [more]
A0A1Y2MAH0_EPING4.500e-829.76Uncharacterized protein n=1 Tax=Epicoccum nigrum T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 235..272
e-value: 2.3E-8
score: 34.1
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 98..271
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..272
NoneNo IPR availableTMHMMTMhelixcoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1093contigF-serratus_M_contig1093:72219..81729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1093.859.1mRNA_F-serratus_M_contig1093.859.1Fucus serratus malemRNAF-serratus_M_contig1093 72219..81731 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1093.859.1 ID=prot_F-serratus_M_contig1093.859.1|Name=mRNA_F-serratus_M_contig1093.859.1|organism=Fucus serratus male|type=polypeptide|length=272bp
FPHDAPTDVCPARALRCNFEDGDRYQIDGPTSLFYAPHNSRCLCRGAYTS
TLSRGRGSFSRTTGAEVVGKGRVELSNTDTAAMSLGDVRGGVDRSPRAEK
GRAIPQRALEGYQRSLERRPIITKGISSGIIAASANFMQQTLSEVAFSLP
DWTAFTMIGTFYLGPFLHLWFSFLDRLVQSKAVKTRIKSKLGQVVLQVGL
DSTIGAATVNSGVFAINTVLVTAFTGRVSSLSELWSAVRHRVSSNFLTMM
TQNLKLWPWVAFVNFRFVPAKF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22