prot_F-serratus_M_contig1093.856.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1093.856.1
Unique Nameprot_F-serratus_M_contig1093.856.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length901
Homology
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BLAST of mRNA_F-serratus_M_contig1093.856.1 vs. uniprot
Match: D7FZH6_ECTSI (WD repeat domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH6_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.150e-50
Identity = 130/276 (47.10%), Postives = 176/276 (63.77%), Query Frame = 0 
Query:    8 QEQVTVRDERWCAAAGEAEVLLKVWGAGRKSRERHVWVTMSELSPRALRLWVEWRSLAKRSADLEEMRRRERLHQSRAQRKREAEQLKLRRRQARADRFKAEFFAILREHQTRVTDLMDEAVGAAAEAADASRLAEARNDALQRLTENFARRQESVAPPGAPPPKWESMMPRLQEQVVAPLTEAEENAVALFKRRAEERVHQR---ERARQQEEHAARXXXLFXXXXXQHRQWQVVVAREREERLRRELAERDAYMESKRIEKMRAREELKNMRVE 280
            ++Q+ V DERW +A GE EVLL++W AGR+SRER +WV +SEL PRAL LWVEWRSLAKR A+L E+RRR+   Q   + K E  Q  +R RQARA+ FK  F++IL+ H+T V  L++EA+   AEA DA RL +AR  A+++LT N+ RRQE+  PP +   +W +M+PRL +QV+APL E E+N  A  +R+ E+    R   + AR+QE  AAR   +      Q+R WQ                      E+KR+EK+R REELK+MRVE
Sbjct: 2601 EDQIHVVDERWGSAVGEVEVLLRIWAAGRRSREREIWVRVSELRPRALLLWVEWRSLAKREAELAEVRRRQGRRQREEKEKHERAQQVVRHRQARAEHFKMAFYSILKAHETAVAGLLEEAMAVGAEAPDALRLGQARKGAVEKLTANYVRRQETSGPPDSEKMRWGAMVPRLHDQVMAPLIEVEQNMHASLRRKVEDAARARLQMQMAREQE--AARQREMQARQQEQNRIWQAXXXXXXXXXXX-XXXXXXXXREAKRLEKLRVREELKDMRVE 2873
[Close]
BLAST of mRNA_F-serratus_M_contig1093.856.1 vs. uniprot
Match: A0A6H5LKE0_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKE0_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.410e-26
Identity = 78/175 (44.57%), Postives = 102/175 (58.29%), Query Frame = 0 
Query:    3 GGLGGQEQVTVRDERWCAAAGEAEVLLKVWGAGRK---------------SRERHVWVTMSELSPRALRLWVEWRSLAKRSADLEEMRRRERLHQSRAQRKREAEQLKLRRRQARADRFKAEFFAILREHQTRVTDLMDEAVGAAAEAADASRLAEARNDALQRLTENFARRQES 162
            GG  G++Q+ V DERW +A GE EVLL++W AGR+               SRER  WV +SELSPRAL LWV+WRSLAKR A+L E                           ARA+ FK  F++IL+ H+T V  L++EA+   AEA DA RL +AR  A+++LT N+ RRQE+
Sbjct: 3500 GGGAGEDQIHVVDERWGSAVGEVEVLLRIWAAGRRGNANRVQHMSNLEELSRERETWVRVSELSPRALLLWVKWRSLAKREAELAE---------------------------ARAEHFKMAFYSILKAHETAVAGLLEEAMAMGAEAPDALRLEQARKGAVEKLTANYVRRQET 3647
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1093.856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZH6_ECTSI2.150e-5047.10WD repeat domain-containing protein, putative n=1 ... [more]
A0A6H5LKE0_9PHAE3.410e-2644.57PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 260..280
NoneNo IPR availableCOILSCoilCoilcoord: 736..789
NoneNo IPR availableCOILSCoilCoilcoord: 77..104
NoneNo IPR availableCOILSCoilCoilcoord: 200..220
NoneNo IPR availablePANTHERPTHR43939:SF6coord: 296..837
NoneNo IPR availablePANTHERPTHR43939FAMILY NOT NAMEDcoord: 296..837

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1093contigF-serratus_M_contig1093:42990..58213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1093.856.1mRNA_F-serratus_M_contig1093.856.1Fucus serratus malemRNAF-serratus_M_contig1093 42988..58213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1093.856.1 ID=prot_F-serratus_M_contig1093.856.1|Name=mRNA_F-serratus_M_contig1093.856.1|organism=Fucus serratus male|type=polypeptide|length=901bp
GRGGLGGQEQVTVRDERWCAAAGEAEVLLKVWGAGRKSRERHVWVTMSEL
SPRALRLWVEWRSLAKRSADLEEMRRRERLHQSRAQRKREAEQLKLRRRQ
ARADRFKAEFFAILREHQTRVTDLMDEAVGAAAEAADASRLAEARNDALQ
RLTENFARRQESVAPPGAPPPKWESMMPRLQEQVVAPLTEAEENAVALFK
RRAEERVHQRERARQQEEHAARQRELFAAQREQHRQWQVVVAREREERLR
RELAERDAYMESKRIEKMRAREELKNMRVEEARCRKAWKLADQEELFRHQ
EQLKLQQQMQQQHMQQQHMLYEQRQRHRHRSLQQHQFQQQQQQAGPGVST
AGSASSSRGIGEAGNQAPRYSRETLEMAARRLKIQQVRLQQALQAYTDSG
QVQMIASIREKISICAARLQQVQAAYQSYPPATDGGLTEQTIASAGSTAA
APVGGSGGASGLGPGPRSALPWEGVPGSDAIEAKRRQQLRAAQSQLNQTL
TKVRVHEDDYHQMLTLLKQAESRGDDPAISFLQSKLRDAAAAIASGRSDI
HHLDGYIKKQQQHMRQQQQRRVSSMEPEFAAGAAGGGIGKEAARDQFAAR
GLSHPQGLYKHPDQRHQQPESAGLAHSSPHGASWQQQQQQQQLRPPSAGS
PRFSASEPPRRGSAERDSLRGVSVRGGDLPSPPFTASQFGGTVPEGVLTG
VRGRDMGDGGRGSPRDVGGEFAQWPQPPHQEQPEHRQTLQQQQQQQLNQI
SSMRRQQQQQQQQQQQQQRQQHQRRQQQQQQQQQRHRQQRAGGLTGGWTS
EDPDQQPQQQVAWARSDQVAPPEDQQKQPMQQQQQQQMWPAQPSNTMDLE
SRLFEEEDDDDQQVDHELFEEQDDAVGDEQKKQDTPSPATGMQGAGTGTG
A
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