prot_F-serratus_M_contig1087.809.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1087.809.1
Unique Nameprot_F-serratus_M_contig1087.809.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length199
Homology
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Match: D8LQS3_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQS3_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 3.130e-79
Identity = 128/199 (64.32%), Postives = 153/199 (76.88%), Query Frame = 0
Query:    1 MVVGDVSKEEDCKKIVDVAVETFGGLHIAFNNAGVFMGAPFSEITGDMASTIFDINLKSLVFSFKYQIPAMAKS-GQKGSIIINSSSMASRVSALPFTRNGGVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATPINGPMTHDQLTELTKMSQIIGRPIEPEEIAKVVLFLASDDAAMVTGSEYNIDGGWTIKA 198
            + VGD SKE DCKK+VD A+E FGGLH+AFNNAGVF   PF++IT D    + +IN+KSL + FKYQIPAM  + G KGSII+N+SS A R +ALP    GG+Y+ASKA A MLMKYAAIEG  SGVRVNSV+PGHV TPI G M  + L  +T  +Q+I RPI+PEEIA VV+FLAS+DAAMVTGS Y +DGGW IKA
Sbjct:   58 LAVGDASKEADCKKMVDTAIEKFGGLHVAFNNAGVFRAVPFADITEDTIDDLLNINVKSLAWCFKYQIPAMKNTAGGKGSIIVNTSSTALRTTALPGMAGGGMYSASKAAAEMLMKYAAIEGAASGVRVNSVSPGHVETPIYGEMPRETLVAVTGTTQLIARPIKPEEIANVVIFLASEDAAMVTGSTYTMDGGWAIKA 256          
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Match: D8LQS1_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS1_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 2.570e-71
Identity = 123/199 (61.81%), Postives = 144/199 (72.36%), Query Frame = 0
Query:    1 MVVGDVSKEEDCKKIVDVAVETFGGLHIAFNNAGVFMGAPFSEITGDMASTIFDINLKSLVFSFKYQIPAMAKS-GQKGSIIINSSSMASRVSALPFTRNGGVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATPINGPMTHDQLTELTKMSQIIGRPIEPEEIAKVVLFLASDDAAMVTGSEYNIDGGWTIKA 198
            +VVGDVSKE DCKK+VD A+E FGGLH+AFNNAGVF   PF +IT D    I + N+KS+ +  KYQIPAM  + G KGSII+N+S    R SALP     G+Y+ASKA A MLMKYAAIEG  SGVRVNSVAPG V TPI G M  D L      +Q++ RP  PEEIAKVV+FLAS+DA MVTGS Y +DGGW +KA
Sbjct:   60 VVVGDVSKEMDCKKMVDTAIEKFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNTNVKSIAWCLKYQIPAMKDTAGGKGSIIVNTSVTGLRPSALPGLTGAGMYSASKAAAEMLMKYAAIEGAASGVRVNSVAPGLVETPIFGDMPVDTLVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA 258          
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Match: A0A835ZEC4_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC4_9STRA)

HSP 1 Score: 171 bits (434), Expect = 6.660e-50
Identity = 98/200 (49.00%), Postives = 128/200 (64.00%), Query Frame = 0
Query:    5 DVSKEEDCKKIVDVAVETFGGLHIAFNNAGVFMGAPFSE-----ITGDMASTIFDINLKSLVFSFKYQIPAMAKSGQKGSIIINSSSMASRVSALPFTRNGGVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATPIN---GPMTHDQLTELTKMSQIIGRPIEPEEIAKVVLFLASDDAAMVTGSEYNIDGGWTI 196
            DVSKE   K +VD+A+  +G L +AF NAG F GAPF+E     +T +M  T+ D N KS+VF FKY +PA+ KSG  GSI++NSS+  S  SA         YAASKA   ML+KYAA+E  P   RV SVAPG V TPI    G M   ++T++ K  Q++ R   PEE+A+ V FL SDDA+ VTGS +++DGG +I
Sbjct:   65 DVSKEATNKAMVDLAMSKYGRLDVAFFNAGTFAGAPFAEASLGHVTNEMVDTVMDTNFKSVVFGFKYALPAIEKSGGHGSIVVNSSAAGSTASAKSVCAGIAPYAASKAAVDMLVKYAAVEAAPHNTRVTSVAPGTVLTPIFQLFGDMKDSEVTDMAKAIQLMQRAGRPEEVARFVCFLLSDDASFVTGSVHSVDGGASI 264          
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Match: A0A835YKB8_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB8_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.200e-48
Identity = 92/196 (46.94%), Postives = 130/196 (66.33%), Query Frame = 0
Query:    2 VVGDVSKEEDCKKIVDVAVETFGGLHIAFNNAGVFMGAPFSEITGDMASTIFDINLKSLVFSFKYQIPAMAKSGQKGSIIINSSSMASRVSALPFTRNGGVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATPINGPMTHDQLTELTKMSQIIGRPIEPEEIAKVVLFLASDDAAMVTGSEYNIDGGWTIK 197
            VV D S +ED K++VD A+ET+G L+++F NAGV    P SE+   M  T++D+N+K + ++ KYQ+PA+ KSG KGS++INSS + S V+A P  +  G YA++KA   +LMKYAAIE    G RVNS+A G V T + G    +   E+ KM  ++ R   PEEIA+ V FLASD+A+ VTG+    DGG ++K
Sbjct:   62 VVMDASVDEDNKRLVDTALETYGLLNVSFINAGVHRAKPISEVDASMLDTLYDVNVKGVAYALKYQLPAIEKSGGKGSVVINSSCLGSTVTAFPIFKGNGPYASTKAAVDILMKYAAIEAIDHGTRVNSIAAGAVFTNLVG-APEEAFEEMGKMVGLMPRAGRPEEIARCVCFLASDEASFVTGTVLTADGGSSLK 256          
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Match: A0A835YQ90_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ90_9STRA)

HSP 1 Score: 166 bits (421), Expect = 4.420e-48
Identity = 91/197 (46.19%), Postives = 129/197 (65.48%), Query Frame = 0
Query:    2 VVGDVSKEEDCKKIVDVAVETFGGLHIAFNNAGVFMGAPFSEITGDMASTIFDINLKSLVFSFKYQIPAMAKSGQKGSIIINSSSMASRVSALPFTRNGGVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATP-INGPMTHDQLTELTKMSQIIGRPIEPEEIAKVVLFLASDDAAMVTGSEYNIDGGWTIK 197
            VV D S +ED K++VD  +ET+G L+++F NAGV +  P SE+ G M   ++D+N+K + ++ KYQ+PA+ KSG KGS++INSS   S V+A P  +  G YA++KA   +LMKYAAIE    G RVNS+APG + T  +  P   +    + KM  ++ R   PEEIA+ V FLASDDA+ VTG+    DGG ++K
Sbjct:   59 VVMDASIDEDNKRLVDTTLETYGSLNLSFINAGVHLAKPISEVDGSMLDKLYDVNVKGVAYALKYQLPAIEKSGGKGSVVINSSCAGSTVTAFPIFKGNGPYASTKAAVDILMKYAAIEAIDHGTRVNSIAPGAIYTSLVEAP--EEVFDSIGKMVHLMPRAGRPEEIARCVCFLASDDASFVTGTVMIADGGASLK 253          
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Match: A0A835YRJ1_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ1_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.570e-47
Identity = 89/193 (46.11%), Postives = 129/193 (66.84%), Query Frame = 0
Query:    5 DVSKEEDCKKIVDVAVETFGGLHIAFNNAGVFMGAPFSEITGDMASTIFDINLKSLVFSFKYQIPAMAKSGQKGSIIINSSSMASRVSALPFTRNGGVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATPINGPMTHDQLTELTKMSQIIGRPIEPEEIAKVVLFLASDDAAMVTGSEYNIDGGWTIK 197
            D S +ED K++VD A+ET+G ++++F NAG++  A  +E+T  +   ++D N+K + ++ KYQ+ A+ KSG KGS++INSS     V+A P  R+ G YA++KA A +LMKYAAIE    G RVNS+APG VAT + G    D   E+ K   ++ R   PEEIA+ V FLASDDA+ VTG+    DGG+++K
Sbjct:   63 DASVDEDNKRLVDKALETYGAVNVSFINAGIYRTAVAAEVTKTILDELYDTNVKGVAYALKYQLAAIEKSGGKGSVVINSSCAGGNVTAFPVFRSNGPYASTKAAADILMKYAAIEAIDHGTRVNSIAPGVVATGL-GDFPEDAFDEMGKTVHLMPRAGRPEEIARCVCFLASDDASFVTGTVLYADGGFSLK 254          
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Match: A0A835ZCX6_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCX6_9STRA)

HSP 1 Score: 148 bits (373), Expect = 8.930e-41
Identity = 90/196 (45.92%), Postives = 117/196 (59.69%), Query Frame = 0
Query:    5 DVSKEEDCKKIVDVAVETFGGLHIAFNNAGVFMGAPFSEITGDMASTIFDINLKSLVFSFKYQIPAMAKSGQKGSIIINSSSMASRVSALPFTRNGGVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATP----INGPMTHDQLTELTKMSQIIGRPIEPEEIAKVVLFLASDDAAMVTGSEYNIDGGWTI 196
            DVS+E   K +V++A+  +G L I F NAG F GA        +A  I   N KS VF FKY +PA+ KSG +GSI++NSS   S V ALP      VY+ASKA   ML+KYAA+E  P   RVNS+APG V TP    ++  +    +    K  Q+I R   PEE+AK V FLASD+A+ VTGS + +DGG  +
Sbjct:   73 DVSQEATNKAMVELAMAKYGRLDIVFFNAGTFEGAL-------LAQAILATNFKSAVFGFKYALPAIEKSGGQGSIVVNSSVAGSAVCALPRAAGAAVYSASKAAVDMLVKYAAVEAAPHNTRVNSIAPGTVRTPFLQGVHPGLQDSDIDRGAKGIQLIQRAASPEEVAKFVCFLASDEASFVTGSVHLVDGGAAV 261          
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Match: D8LQS5_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS5_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.290e-40
Identity = 82/136 (60.29%), Postives = 98/136 (72.06%), Query Frame = 0
Query:   15 IVDVAVETFGGLHIAFNNAGVFMGAPFSEITGDMASTIFDINLKSLVFSFKYQIPAMAKS-GQKGSIIINSSSMASRVSALPFTRNGGVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATPINGPMTHDQL 149
            +VD A++ FGGLH+AFNNAGV+  APF++I  D    + +IN+KSL + FKYQIPAM  S G KGSII+N+SS A R SA P     G+YAASKA A +LMKYAAIEG  SGVRVNSVA G V TPI G M  + L
Sbjct:    1 MVDTAIQKFGGLHVAFNNAGVYRSAPFADIMEDTIDDLLNINVKSLAWCFKYQIPAMKDSAGGKGSIIVNTSSTALRPSASPGMTGSGMYAASKAAAELLMKYAAIEGAASGVRVNSVARGLVKTPIFGDMPDETL 136          
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Match: A0A836C9I6_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I6_9STRA)

HSP 1 Score: 143 bits (360), Expect = 5.610e-39
Identity = 85/196 (43.37%), Postives = 119/196 (60.71%), Query Frame = 0
Query:    2 VVGDVSKEEDCKKIVDVAVETFGGLHIAFNNAGVFMGAPFSEITGDMASTIFDINLKSLVFSFKYQIPAMAKSGQKGSIIINSSSMASRVSALPFTRNGGVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATPINGPMTHDQLTELTKMSQIIGRPIEPEEIAKVVLFLASDDAAMVTGSEYNIDGGWTIK 197
            V+ D SK+ED K++VD  +E +  L ++F NAG++  A  +E+T      +F  N+K + F+ KYQ+PA+ KSG  GSI+INSS     V+ +P     G ++ASKAGA MLM++AAIE    G RVNS+APG V T     M+ +    L     ++ R   PEEIA  V FL SD+A+ VTG+    DGG +IK
Sbjct:   55 VIADASKDEDNKQLVDAVLEKYHRLDVSFINAGIYRPATLTEVTEATVDELFATNVKGVAFALKYQLPAIEKSGGHGSIVINSSVAGRVVAEMPEFGGNGPFSASKAGADMLMRHAAIEASRHGTRVNSIAPGIVHTGAAN-MSQEVWDVLGTTMSLMARAGRPEEIAACVCFLLSDEASFVTGTVMVADGGVSIK 249          
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Match: A0A556CHQ1_9MICO (Glucose 1-dehydrogenase n=10 Tax=Brevibacterium TaxID=1696 RepID=A0A556CHQ1_9MICO)

HSP 1 Score: 137 bits (346), Expect = 7.370e-37
Identity = 82/192 (42.71%), Postives = 116/192 (60.42%), Query Frame = 0
Query:    5 DVSKEEDCKKIVDVAVETFGGLHIAFNNAGVF-MGAPFSEITGDMASTIFDINLKSLVFSFKYQIPAMAKSGQKGSIIINSSSMASRVSALPFTRNGGVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATPINGPMTHDQLTELTKMSQIIGRPIEPEEIAKVVLFLASDDAAMVTGSEYNIDGGWT 195
            D + +ED +K+V  AV+T+GGL+ A NNAG+  +  P  E   D    + DINL  +++  +YQIPAM K+G + S I+N +S+   V+A+    N G Y A+K G   + K AA E G  G+R+NSV PG++ TP+       +  E  K    +GR    EE+AKVV FL SDDA+ VTG+ Y IDGG+T
Sbjct:   63 DTAAKEDSEKVVKFAVDTYGGLNYAVNNAGIGGVQVPVGETDLDNWDKVIDINLNGVLYGMRYQIPAMLKAGARDSAIVNMASVHGSVAAI----NNGAYTAAKHGVVGITKNAAAEYGAQGLRINSVGPGYITTPLLESNLDAETLEGLKAKHPLGRLGTAEEVAKVVNFLLSDDASFVTGAYYLIDGGYT 250          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1087.809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQS3_ECTSI3.130e-7964.32Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
D8LQS1_ECTSI2.570e-7161.81Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]
A0A835ZEC4_9STRA6.660e-5049.00Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835YKB8_9STRA1.200e-4846.94Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835YQ90_9STRA4.420e-4846.19Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835YRJ1_9STRA2.570e-4746.11Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A835ZCX6_9STRA8.930e-4145.92Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
D8LQS5_ECTSI1.290e-4060.29Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]
A0A836C9I6_9STRA5.610e-3943.37Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A556CHQ1_9MICO7.370e-3742.71Glucose 1-dehydrogenase n=10 Tax=Brevibacterium Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 79..87
score: 40.44
coord: 103..122
score: 33.47
coord: 24..35
score: 41.57
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 72..88
score: 28.28
coord: 103..122
score: 36.55
coord: 158..178
score: 41.02
coord: 24..35
score: 47.46
coord: 124..141
score: 44.59
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 2..195
e-value: 1.3E-47
score: 162.3
NoneNo IPR availableGENE3D3.40.50.720coord: 1..198
e-value: 6.6E-55
score: 188.4
NoneNo IPR availablePANTHERPTHR24321FAMILY NOT NAMEDcoord: 2..197
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1087contigF-serratus_M_contig1087:288003..292025 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1087.809.1mRNA_F-serratus_M_contig1087.809.1Fucus serratus malemRNAF-serratus_M_contig1087 287405..305242 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1087.809.1 ID=prot_F-serratus_M_contig1087.809.1|Name=mRNA_F-serratus_M_contig1087.809.1|organism=Fucus serratus male|type=polypeptide|length=199bp
MVVGDVSKEEDCKKIVDVAVETFGGLHIAFNNAGVFMGAPFSEITGDMAS
TIFDINLKSLVFSFKYQIPAMAKSGQKGSIIINSSSMASRVSALPFTRNG
GVYAASKAGASMLMKYAAIEGGPSGVRVNSVAPGHVATPINGPMTHDQLT
ELTKMSQIIGRPIEPEEIAKVVLFLASDDAAMVTGSEYNIDGGWTIKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf