prot_F-serratus_M_contig1084.784.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1084.784.1
Unique Nameprot_F-serratus_M_contig1084.784.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length393
Homology
BLAST of mRNA_F-serratus_M_contig1084.784.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 9.920e-94
Identity = 188/380 (49.47%), Postives = 234/380 (61.58%), Query Frame = 0
Query:   14 TAIIAASFVGAV--------DVGSCEEFAAVDRKTETEVTITNADFACDEYTRVSIRSDMVLKSSVGPVTFSNFSLKIYESLIVEPDVIFTGIVDVDKNGGAVKVDLSASLVFQGTAEFTGVSILPREVDL----RIYRKGGALHNKGDVTFEKYVRFENCYNERQEGQQTDEEGNSLHDASSGGGGAIYNHVKGTMTFLDGLNMTGNIAHSYFXXXXXXXXXXXNRGDIIVDGDAYFANNRAQEGGAIFQERWGTLEFNGGVSFVNNLCWNLRGGAIRNDGGVITLNGASVFDDNFASSTGDGGNGGGIYXXXXXXXXXXXXXXXXXXWAWIGGAIYNREREPDGFEDDEGRAYKIPILTLSDETIFEDNFGDDCPDIA 381
            +A+ AA F GAV        +VGSC EFAA+DRK ETEVTIT ADFACDEYTR+SIRS+MVLKSSVG VTFSNF+LK+Y SL VEPDV+FTG+  V+KNGG +K++L A  VF+GTAEF+  SI+   +D      I RKGGA+H KG +TFEK   F    N+R            L+   SG GGAI  HVKG++ F+  L MT N A  YF           NRGDI+VDG+A F  N    GGAIFQE+W TL FN  V+F +N C +  GG I N GG +T N  S+F D FA ++GDGG      XXXXXXXX          +   GGA++N    P+ +   E  +Y +P ++  ++TIFEDN    C D A
Sbjct:    5 SALSAALFAGAVRSGARAAVNVGSCTEFAAIDRKVETEVTITEADFACDEYTRLSIRSNMVLKSSVGKVTFSNFALKVYGSLTVEPDVVFTGVSLVEKNGGVLKLELGAVGVFKGTAEFSDNSIISTSIDESTEEEILRKGGAIHTKGSLTFEKDATFSGNLNDR------------LY-YGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIF--NRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFN-SAVPNAYFTAEDESYVMPTISYPEDTIFEDNDAQYCNDFA 368          
BLAST of mRNA_F-serratus_M_contig1084.784.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 2.820e-66
Identity = 141/372 (37.90%), Postives = 192/372 (51.61%), Query Frame = 0
Query:   27 VGSCEEFAAVDRKTETEVTITNADFACDEYTRVSIRSDMVLKSSVGPVTFSNFSLKIYESLIVEPDVIFTGIVDVDKNGGAVKVDLSASLVFQGTAEFTGVSILPREVD---------------LRIYRKGGALHNKGDVTFEKYVRFENCYNERQEGQQTDEEGNSLHDASS---GGGGAIYNHVKGTMTFLDGLNMTGNIAHSYFXXXXXXXXXXXNRGDIIVDGDAYFANNRAQEGGAIFQERWGTLEFNGGVSFVNNLCWNLRGGAIRNDGGVITLNGASVFDDNFASSTGDGGNGGGIYXXXXXXXXXXXXXXXXXXWAWIGGAIYNREREPDGFEDDEGRAYKIPILTLSDETIFEDNFGDDCPDI 380
            V +C + A VD    T +TI  + FACDEYTR  +R+ M LK++V  V F NFSLK+   L VEPDV+F G+VD  KNGG + V   A+  F GT+EF+  S+  +++                  I +KGGA+HNKG +TFE    FE                N +H   S   G  GAI N   GT+ F   L M  N A  +F           NRG+I+V+G++ F+ N + +GG I+Q   GT+ FNG  +F  N  ++L GG + NDGGV+ +N  S+F+ N AS +GDGG GG IY                   A++GGAIY      DG   DE       + T  D+T+FEDN  + CPD+
Sbjct:   24 VATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFER---------------NEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIY---NRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYTS----DG---DEENGEPASVTTFPDDTVFEDNSAEHCPDV 370          
BLAST of mRNA_F-serratus_M_contig1084.784.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 5.260e-63
Identity = 139/372 (37.37%), Postives = 186/372 (50.00%), Query Frame = 0
Query:   27 VGSCEEFAAVDRKTETEVTITNADFACDEYTRVSIRSDMVLKSSVGPVTFSNFSLKIYESLIVEPDVIFTGIVDVDKNGGAVKVDLSASLVFQGTAEFTGVSILPREVDL---------------RIYRKGGALHNKGDVTFEKYVRFENCYNERQEGQQTDEEGNSLHDASS---GGGGAIYNHVKGTMTFLDGLNMTGNIAHSYFXXXXXXXXXXXNRGDIIVDGDAYFANNRAQEGGAIFQERWGTLEFNGGVSFVNNLCWNLRGGAIRNDGGVITLNGASVFDDNFASSTGDGGNGGGIYXXXXXXXXXXXXXXXXXXWAWIGGAIYNREREPDGFEDDEGRAYKIPILTLSDETIFEDNFGDDCPDI 380
            V +C + A VD    T +TI  + FACDEYTR  +R+ M LK++V  V F NFSLK+   L VEPDV F G+VD  KNGG + V   A+  F GT+EF+  S+  +++                  + +KGGA+HNKG +TFE    FE                N++H   S   G  GAI N   GT+ F   L M  N A  +F           NRG+IIVDG++ F+ N A +GG I+Q   G + FN   +F  N  + LRGG + N GGV+ +N  S+F+ N AS +GDGG GG IY                   A+ GGAIY  +      E          + T  D+T+FEDN  D CPD+
Sbjct:   24 VATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFER---------------NAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIY---NRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAIYTDDGSVANGE-------AASVTTFPDDTVFEDNRADFCPDV 370          
BLAST of mRNA_F-serratus_M_contig1084.784.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 2.930e-26
Identity = 61/155 (39.35%), Postives = 86/155 (55.48%), Query Frame = 0
Query:  227 NRGDIIVDGDAYFANNRAQEGGAIFQERWGTLEFNGGVSFVNNLCWNLRGGAIRNDGGVITLNGASVFDDNFASSTGDGGNGGGIYXXXXXXXXXXXXXXXXXXWAWIGGAIYNREREPDGFEDDEGRAYKIPILTLSDETIFEDNFGDD-CPDI 380
            NRG+I V+G++ F+ NR+ +GG I+Q   G + FN   +F +N+  NLRGG + NDGGV+ +N  S+F+ NFA++  DGG GG I+                   AW GGAIY           D+G  Y   + T  D+T+FEDN  D  CPD+
Sbjct:   19 NRGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMGPTTFRENGAWWGGAIYT----------DDG--YPASVTTFPDDTVFEDNSADAYCPDV 161          
BLAST of mRNA_F-serratus_M_contig1084.784.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 3.850e-26
Identity = 97/246 (39.43%), Postives = 125/246 (50.81%), Query Frame = 0
Query:  138 IYRKGGALHNKGDVTFEKYVRFENCYNERQEGQQTDEEGNSLHDASS---GGGGAIYNHVKGTMTFLDGLNMTGNIAHSYFXXXXXXXXXXXNRGDIIVDGDAYFANNRAQEGGAIFQERWGTLEFNGGVSFVNNLCWNLRGGAIRNDGGVITLNGASVFDDNFASSTGDGGNGGGIYXXXXXXXXXXXXXXXXXXWAWIGGAIYNREREPDGFEDDEGRAYKIPILTLSDETIFEDNFGDDCPDI 380
            I +KGGA+HNKG +TF+    FE                N  H  SS   G GGAI N   GT+ F   L M  N A + F           NRG+IIV+G + F+ N A  GG I Q   GT+ FNG  +F  N      GG + N+GGV+ +N  S+F+ N+AS++GDGG GG I+   XXXXXXXXXXXXXXX    GGAIY  + +  G            + T  D+        + CPD+
Sbjct:   35 IVKKGGAIHNKGTLTFDGDATFER---------------NVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIY---NRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAIYTNDADGPG-----------SVTTFPDDXXXXXXRAEYCPDV 251          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1084.784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KTD4_9PHAE9.920e-9449.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLJ6_ECTSI2.820e-6637.90Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI5.260e-6337.37Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FQG1_ECTSI2.930e-2639.35Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FL58_ECTSI3.850e-2639.43Asn/thr-rich large protein family protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..392
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.692
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 175..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1084contigF-serratus_M_contig1084:73860..90161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1084.784.1mRNA_F-serratus_M_contig1084.784.1Fucus serratus malemRNAF-serratus_M_contig1084 73757..90956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1084.784.1 ID=prot_F-serratus_M_contig1084.784.1|Name=mRNA_F-serratus_M_contig1084.784.1|organism=Fucus serratus male|type=polypeptide|length=393bp
MRLLFTFYDIILATAIIAASFVGAVDVGSCEEFAAVDRKTETEVTITNAD
FACDEYTRVSIRSDMVLKSSVGPVTFSNFSLKIYESLIVEPDVIFTGIVD
VDKNGGAVKVDLSASLVFQGTAEFTGVSILPREVDLRIYRKGGALHNKGD
VTFEKYVRFENCYNERQEGQQTDEEGNSLHDASSGGGGAIYNHVKGTMTF
LDGLNMTGNIAHSYFDANRGEGGAIFNRGDIIVDGDAYFANNRAQEGGAI
FQERWGTLEFNGGVSFVNNLCWNLRGGAIRNDGGVITLNGASVFDDNFAS
STGDGGNGGGIYNYDGGNITFKGLSQFTSNWAWIGGAIYNREREPDGFED
DEGRAYKIPILTLSDETIFEDNFGDDCPDIAYLQSEGLVCGP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence