prot_F-serratus_M_contig1084.783.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1084.783.1
Unique Nameprot_F-serratus_M_contig1084.783.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length393
Homology
BLAST of mRNA_F-serratus_M_contig1084.783.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 1.620e-89
Identity = 185/380 (48.68%), Postives = 230/380 (60.53%), Query Frame = 0
Query:   14 TAIIAASFVGAV--------DVGSCEEFAAVDRKTETEVTITNADFACDEYTRVSIRSDMVLKSSVGPVTFSNFSLKIYESLIVEPDVIFTRIVDVDKNGGAVKVDLSASLVFQGTAEFTGVSILPREVDL----RIYRKGGALHNKGDVTFEKYVRFENCYNERQDGQQTDEEGNSLYDASSGGGGAIYNHVKGTMTFLDGLNMTGNIAHXXXXXXXXXXXXXXXRGDIIVDGDAYFANNRAQEGGAIFQERWGTLEFNGGVSFVNNLCRNLRGGAIRNDGGVITLNGASVFDDNFASSTGDGGNGGGIYXXXXXXXXXXXXXXXXXXWAWIGGAIYNREREPDGFEDDEGRAYKIPILTLSDETIFEDNFGDDCPDIA 381
            +A+ AA F GAV        +VGSC EFAA+DRK ETEVTIT ADFACDEYTR+SIRS+MVLKSSVG VTFSNF+LK+Y SL VEPDV+FT +  V+KNGG +K++L A  VF+GTAEF+  SI+   +D      I RKGGA+H KG +TFEK   F    N+R            LY   SG GGAI  HVKG++ F+  L MT N A                RGDI+VDG+A F  N    GGAIFQE+W TL FN  V+F +N C +  GG I N GG +T N  S+F D FA ++GDGG      XXXXXXXX          +   GGA++N    P+ +   E  +Y +P ++  ++TIFEDN    C D A
Sbjct:    5 SALSAALFAGAVRSGARAAVNVGSCTEFAAIDRKVETEVTITEADFACDEYTRLSIRSNMVLKSSVGKVTFSNFALKVYGSLTVEPDVVFTGVSLVEKNGGVLKLELGAVGVFKGTAEFSDNSIISTSIDESTEEEILRKGGAIHTKGSLTFEKDATFSGNLNDR------------LY-YGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFN--RGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFN-SAVPNAYFTAEDESYVMPTISYPEDTIFEDNDAQYCNDFA 368          
BLAST of mRNA_F-serratus_M_contig1084.783.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 8.860e-61
Identity = 136/369 (36.86%), Postives = 186/369 (50.41%), Query Frame = 0
Query:   27 VGSCEEFAAVDRKTETEVTITNADFACDEYTRVSIRSDMVLKSSVGPVTFSNFSLKIYESLIVEPDVIFTRIVDVDKNGGAVKVDLSASLVFQGTAEFTGVSILPREVD---------------LRIYRKGGALHNKGDVTFEKYVRFENCYNERQDGQQTDEEGNSLYDASSGGGGAIYNHVKGTMTFLDGLNMTGNIAHXXXXXXXXXXXXXXXRGDIIVDGDAYFANNRAQEGGAIFQERWGTLEFNGGVSFVNNLCRNLRGGAIRNDGGVITLNGASVFDDNFASSTGDGGNGGGIYXXXXXXXXXXXXXXXXXXWAWIGGAIYNREREPDGFEDDEGRAYKIPILTLSDETIFEDNFGDDCPDI 380
            V +C + A VD    T +TI  + FACDEYTR  +R+ M LK++V  V F NFSLK+   L VEPDV+F  +VD  KNGG + V   A+  F GT+EF+  S+  +++                  I +KGGA+HNKG +TFE    FE      +D  +             G  GAI N   GT+ F   L M  N A                RG+I+V+G++ F+ N + +GG I+Q   GT+ FNG  +F  N   +L GG + NDGGV+ +N  S+F+ N AS +GDGG GG IY                   A++GGAIY      DG   DE       + T  D+T+FEDN  + CPD+
Sbjct:   24 VATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVE------------QGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIYN---RGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYTS----DG---DEENGEPASVTTFPDDTVFEDNSAEHCPDV 370          
BLAST of mRNA_F-serratus_M_contig1084.783.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 2.260e-57
Identity = 134/369 (36.31%), Postives = 179/369 (48.51%), Query Frame = 0
Query:   27 VGSCEEFAAVDRKTETEVTITNADFACDEYTRVSIRSDMVLKSSVGPVTFSNFSLKIYESLIVEPDVIFTRIVDVDKNGGAVKVDLSASLVFQGTAEFTGVSILPREVDL---------------RIYRKGGALHNKGDVTFEKYVRFENCYNERQDGQQTDEEGNSLYDASSGGGGAIYNHVKGTMTFLDGLNMTGNIAHXXXXXXXXXXXXXXXRGDIIVDGDAYFANNRAQEGGAIFQERWGTLEFNGGVSFVNNLCRNLRGGAIRNDGGVITLNGASVFDDNFASSTGDGGNGGGIYXXXXXXXXXXXXXXXXXXWAWIGGAIYNREREPDGFEDDEGRAYKIPILTLSDETIFEDNFGDDCPDI 380
            V +C + A VD    T +TI  + FACDEYTR  +R+ M LK++V  V F NFSLK+   L VEPDV F  +VD  KNGG + V   A+  F GT+EF+  S+  +++                  + +KGGA+HNKG +TFE    FE      +D  +             G  GAI N   GT+ F   L M  N A                RG+IIVDG++ F+ N A +GG I+Q   G + FN   +F  N    LRGG + N GGV+ +N  S+F+ N AS +GDGG GG IY                   A+ GGAIY  +      E          + T  D+T+FEDN  D CPD+
Sbjct:   24 VATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFERNAVHTEDSVE------------QGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIYN---RGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAIYTDDGSVANGE-------AASVTTFPDDTVFEDNRADFCPDV 370          
BLAST of mRNA_F-serratus_M_contig1084.783.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.130e-25
Identity = 60/154 (38.96%), Postives = 85/154 (55.19%), Query Frame = 0
Query:  228 RGDIIVDGDAYFANNRAQEGGAIFQERWGTLEFNGGVSFVNNLCRNLRGGAIRNDGGVITLNGASVFDDNFASSTGDGGNGGGIYXXXXXXXXXXXXXXXXXXWAWIGGAIYNREREPDGFEDDEGRAYKIPILTLSDETIFEDNFGDD-CPDI 380
            RG+I V+G++ F+ NR+ +GG I+Q   G + FN   +F +N+  NLRGG + NDGGV+ +N  S+F+ NFA++  DGG GG I+                   AW GGAIY           D+G  Y   + T  D+T+FEDN  D  CPD+
Sbjct:   20 RGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMGPTTFRENGAWWGGAIYT----------DDG--YPASVTTFPDDTVFEDNSADAYCPDV 161          
BLAST of mRNA_F-serratus_M_contig1084.783.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 4.960e-23
Identity = 92/243 (37.86%), Postives = 120/243 (49.38%), Query Frame = 0
Query:  138 IYRKGGALHNKGDVTFEKYVRFENCYNERQDGQQTDEEGNSLYDASSGGGGAIYNHVKGTMTFLDGLNMTGNIAHXXXXXXXXXXXXXXXRGDIIVDGDAYFANNRAQEGGAIFQERWGTLEFNGGVSFVNNLCRNLRGGAIRNDGGVITLNGASVFDDNFASSTGDGGNGGGIYXXXXXXXXXXXXXXXXXXWAWIGGAIYNREREPDGFEDDEGRAYKIPILTLSDETIFEDNFGDDCPDI 380
            I +KGGA+HNKG +TF+    FE      +   Q             G GGAI N   GT+ F   L M  N A                RG+IIV+G + F+ N A  GG I Q   GT+ FNG  +F  N      GG + N+GGV+ +N  S+F+ N+AS++GDGG GG I+   XXXXXXXXXXXXXXX    GGAIY  + +  G            + T  D+        + CPD+
Sbjct:   35 IVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQR------------GNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIYN---RGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAIYTNDADGPG-----------SVTTFPDDXXXXXXRAEYCPDV 251          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1084.783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KTD4_9PHAE1.620e-8948.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLJ6_ECTSI8.860e-6136.86Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI2.260e-5736.31Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FQG1_ECTSI2.130e-2538.96Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FL58_ECTSI4.960e-2337.86Asn/thr-rich large protein family protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..392
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.692
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 157..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1084contigF-serratus_M_contig1084:11393..30017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1084.783.1mRNA_F-serratus_M_contig1084.783.1Fucus serratus malemRNAF-serratus_M_contig1084 11293..30353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1084.783.1 ID=prot_F-serratus_M_contig1084.783.1|Name=mRNA_F-serratus_M_contig1084.783.1|organism=Fucus serratus male|type=polypeptide|length=393bp
MRLLFTFYDIILATAIIAASFVGAVDVGSCEEFAAVDRKTETEVTITNAD
FACDEYTRVSIRSDMVLKSSVGPVTFSNFSLKIYESLIVEPDVIFTRIVD
VDKNGGAVKVDLSASLVFQGTAEFTGVSILPREVDLRIYRKGGALHNKGD
VTFEKYVRFENCYNERQDGQQTDEEGNSLYDASSGGGGAIYNHVKGTMTF
LDGLNMTGNIAHSYFDANRGEGGAIFNRGDIIVDGDAYFANNRAQEGGAI
FQERWGTLEFNGGVSFVNNLCRNLRGGAIRNDGGVITLNGASVFDDNFAS
STGDGGNGGGIYNYDGGNITFKGLSQFTSNWAWIGGAIYNREREPDGFED
DEGRAYKIPILTLSDETIFEDNFGDDCPDIAYLQSEGLVCGP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence