prot_F-serratus_M_contig1080.771.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1080.771.1
Unique Nameprot_F-serratus_M_contig1080.771.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length215
Homology
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Match: A0A182GR37_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GR37_AEDAL)

HSP 1 Score: 162 bits (409), Expect = 1.240e-44
Identity = 79/208 (37.98%), Postives = 125/208 (60.10%), Query Frame = 0
Query:    7 SYLPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGKVVVIIVVYVDDLLV 214
            SY+ D PTT+ E +   +WP W+ A++ EMD  ++   W +V  P+G+  +  K IFK K  +D    +YK R VA+GF Q +G  Y ++ SP     ++R  LA+  Q  W   Q+DV+ AFL  ++TEE+Y+  P+G+      V RL++++YGL  A   W+++F   ++  GF RS+ D C++RR   G   VI+V+YVDD+L+
Sbjct:   89 SYVEDLPTTVSECRQREDWPLWKQAMQEEMDSLVSNEKWTLVKLPEGRNAVTCKWIFKLKHSEDNEAPRYKARLVARGFTQKQGFDYSDTYSPLARMDTLRTVLALANQRGWSVHQMDVKCAFLNGELTEEIYMLQPEGFEQRDGLVCRLKRSLYGLKQAARSWNERFHNFVVRLGFVRSRNDLCLYRRGS-GDTQVILVIYVDDVLI 295          
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Match: A0A2I0J8X0_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0J8X0_PUNGR)

HSP 1 Score: 159 bits (402), Expect = 4.000e-44
Identity = 82/207 (39.61%), Postives = 131/207 (63.29%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRD--SPNQVGRLQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGKVVVIIVVYVDDLLVL 215
            DEPTT  EA +  +  +W  A++ EM+      VW +VD P+G  ++G K +FK+K   DG V  +K R VAKGFRQ+ G+ Y E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL  ++ E++Y+  P+G+ D  S  +V +LQ+++YGL  A   W+ +F   +   GF +++ +PCV++ K  G +V+ +V+YVDD+L++
Sbjct:   70 DEPTTYAEAVIGPDSEKWLVAMRSEMESMYTNQVWTLVDPPEGAKLIGYKWVFKKKTDMDGNVITFKRRLVAKGFRQVHGVDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFVDPHSAEKVCKLQRSIYGLKQASRSWNFRFDDAIKEFGFNKNEDEPCVYK-KVSGSIVIFLVLYVDDILLI 275          
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Match: A0A2I0IJP3_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IJP3_PUNGR)

HSP 1 Score: 160 bits (404), Expect = 1.070e-43
Identity = 79/206 (38.35%), Postives = 131/206 (63.59%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP-NQVGRLQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGKVVVIIVVYVDDLLVL 215
            D+PTT  EA    +  +W  A+K EMD      VW +VD P+G   +G K +FKRK+G DG+VE YK R VAKG+RQ +G+ Y+E+ SP     S+R+ LA+ A  D+E  Q+DV+ AFL   + E+++++ P G+     ++V +L++++YGL      W+++F   + + GF + + +PCV++ K  G ++  +V+YVDD+L++
Sbjct:   74 DDPTTYEEAISDIDSSKWLEAMKSEMDSMSKNQVWDLVDPPEGIVPIGNKWVFKRKIGADGKVETYKARLVAKGYRQKQGVDYEETFSPVAMLKSLRIMLAIAAHYDYEVWQMDVKTAFLNVSIEEDIFMDQPKGFESKDKSKVCKLKRSIYGLTQVSRSWNRRFDEAVKSFGFIKYEDEPCVYK-KASGSMIAFLVLYVDDILLM 278          
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Match: A0A2I0K9M6_PUNGR (CCHC-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K9M6_PUNGR)

HSP 1 Score: 163 bits (412), Expect = 5.370e-43
Identity = 82/206 (39.81%), Postives = 133/206 (64.56%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP-NQVGRLQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGKVVVIIVVYVDDLLVL 215
            D+PTT  EA +  +  +W  A+K EMD      VW +VD PKG   +G K IFKRK+G DG+VE YK R VAKG+RQ +G+ Y+E+ SP     SIR+ L V A  D+E  Q+DV+ AFL   + E+++++ P G+     ++V +L++++YGL      W+++F   + + GF +++ +PCV++ K  G ++V +V+Y+DD+L++
Sbjct:  389 DDPTTYEEAILDIDSSKWLEAMKSEMDSMSKNQVWDLVDPPKGIVPIGNKWIFKRKIGADGKVETYKARLVAKGYRQKQGVDYEETFSPVAMLKSIRIMLVVAAHYDYEVWQMDVKTAFLNEYIEEDIFMDQPKGFESKDKSKVCKLKRSIYGLKQVSRSWNRRFDEAVKSFGFIKNEVEPCVYK-KASGSMIVFLVLYMDDILLI 593          
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Match: A0A5R9QKQ6_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Labilibacter sediminis TaxID=2570926 RepID=A0A5R9QKQ6_9BACT)

HSP 1 Score: 156 bits (394), Expect = 1.270e-42
Identity = 85/207 (41.06%), Postives = 131/207 (63.29%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGKVVVIIVVYVDDLLVL 215
            +EP T  EA  SSE PQW+ A+K E++  +    W++VD P G   LG + IFKRK+  DG ++KYK R V KG+RQ +G+ Y ++ SP    +SIRM LA+ A  + +  Q+DV+ AFL  ++ EE+Y+E P+G+  S   N+V +L K++YGL  A   W +KF   ++  GF+ ++ D CV+  K+     VI+ +YVDD+L++
Sbjct:   28 NEPKTYQEAVNSSEGPQWKEAIKSEIESILQNHTWELVDLPPGSKPLGYRWIFKRKMKADGSIDKYKARLVVKGYRQKEGLDYFDTYSPVTRITSIRMVLAIAAIRNLQIHQMDVKTAFLNGELEEEIYMEQPEGFVASGYENKVCKLVKSLYGLKQAPKQWHQKFDQAMMESGFKINECDKCVYV-KNTTHGYVILCLYVDDMLII 233          
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Match: UPI000D464853 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI000D464853)

HSP 1 Score: 154 bits (388), Expect = 1.510e-42
Identity = 80/206 (38.83%), Postives = 128/206 (62.14%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP-NQVGRLQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGKVVVIIVVYVDDLLVL 215
            D+P T  EA    +  +W  A+K E+D      VW +VD P+G   +G K +FK+K+G DG+VE YK R VAKGFRQ +GI Y+E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   + E +++E P G+     ++V +L++++YGL  A   W+ +F   + + GF +++ +PCV++ K     +  +V+YVDD+L++
Sbjct:   58 DDPLTYEEAISDIDSSKWIDAMKSEIDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGYIEENIFMEQPRGFESQDGSKVCKLKRSIYGLKQASRSWNIRFDEAIKSFGFIKNEDEPCVYK-KVSDSAITFLVLYVDDILLM 262          
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Match: A0A5N6PND6_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PND6_9ASTR)

HSP 1 Score: 155 bits (393), Expect = 1.530e-42
Identity = 87/216 (40.28%), Postives = 132/216 (61.11%), Query Frame = 0
Query:    2 PTGLASYLPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGKVVVIIVVYVDDLLV 214
            P  L   +  EP T  +A  SSE PQW+ A+K E+D  +    W++VD P G   LG + IFKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ A  + E  Q+DV+ AFL  D+ EE+ +E P+G+  +P Q G+   L K++YGL  A   W +KF   ++  GF+ ++ D CV+  K+  +  VI+ +YVDD+++
Sbjct:   60 PDFLTYMVEGEPQTYRDAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEILMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTMRGYVILCLYVDDMVI 273          
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Match: A0A5N6MBP8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MBP8_9ASTR)

HSP 1 Score: 161 bits (407), Expect = 1.570e-42
Identity = 90/216 (41.67%), Postives = 133/216 (61.57%), Query Frame = 0
Query:    2 PTGLASYLPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGKVVVIIVVYVDDLLV 214
            P  L   +  EP T  EA  SSE PQW+ A+K E+D  +    W++VD P G   LG + IFKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ A  + E  Q+DV+ AFL  D+ EE+Y+E P+G+  +P Q G+   L K++YGL  A   W +KF   ++  GF+ ++ D CV+  K+  +  VI+ +YVDD+L+
Sbjct:  125 PDFLTYMVEGEPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTTRGYVILCLYVDDMLI 338          
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Match: UPI00136360C9 (hypothetical protein n=1 Tax=Ligilactobacillus murinus TaxID=1622 RepID=UPI00136360C9)

HSP 1 Score: 152 bits (385), Expect = 2.650e-42
Identity = 81/207 (39.13%), Postives = 126/207 (60.87%), Query Frame = 0
Query:   11 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGKVVVIIVVYVDDLLVL 215
            DEPTT  +A    +  +W  A+K EM+      VW +VD P+G   +G K +FK+K   DG V  +K R VAKGF+QI GI Y E+ SP     SIR+  A+ A  D+E  Q+DV+ AFL   + E++Y+  P+G+   ++ N+V +LQ+++YGL  A   W+  F   +   GF +++ +PCV++ K  G  +V +V+YVDD+L++
Sbjct:    4 DEPTTYQQAMSGPDSEKWLMAMKSEMESMYENQVWTLVDPPEGVKPIGCKWVFKKKTDMDGNVITFKGRLVAKGFKQIHGIDYDETFSPVAMLKSIRILFAIAAHYDYEIWQMDVKTAFLNGKLLEDVYMTQPEGFVTPENANKVCKLQRSIYGLKQASRSWNLHFDDAIKEFGFIKNEDEPCVYK-KVSGSAIVFLVLYVDDILLI 209          
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Match: A0A5N6PKD3_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PKD3_9ASTR)

HSP 1 Score: 161 bits (407), Expect = 3.380e-42
Identity = 90/216 (41.67%), Postives = 136/216 (62.96%), Query Frame = 0
Query:    3 TGLASYLPD-EPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGKVVVIIVVYVDDLLV 214
            T   +Y+ + EP T  EA  SSE PQW+ A+K E+D  +   +W++VD P G   LG + IFKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ A  + E  Q+DV+ AFL  D+ EE+Y+E P+G+  +P Q G+   L K++YGL  A   W +KF   ++  GF+ ++ D CV+  K+  +  VI+ +YVDD+L+
Sbjct:  281 TDFLTYMVEGEPQTYREAVTSSEGPQWKEAIKNEIDSILQNHIWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINKCDKCVYV-KNTMRGYVILCLYVDDMLI 494          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1080.771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A182GR37_AEDAL1.240e-4437.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2I0J8X0_PUNGR4.000e-4439.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2I0IJP3_PUNGR1.070e-4338.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2I0K9M6_PUNGR5.370e-4339.81CCHC-type domain-containing protein n=1 Tax=Punica... [more]
A0A5R9QKQ6_9BACT1.270e-4241.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000D4648531.510e-4238.83hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
A0A5N6PND6_9ASTR1.530e-4240.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6MBP8_9ASTR1.570e-4241.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00136360C92.650e-4239.13hypothetical protein n=1 Tax=Ligilactobacillus mur... [more]
A0A5N6PKD3_9ASTR3.380e-4241.67Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..214
e-value: 4.4E-43
score: 147.7
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 12..211
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 12..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1080contigF-serratus_M_contig1080:63395..64039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1080.771.1mRNA_F-serratus_M_contig1080.771.1Fucus serratus malemRNAF-serratus_M_contig1080 63395..64039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1080.771.1 ID=prot_F-serratus_M_contig1080.771.1|Name=mRNA_F-serratus_M_contig1080.771.1|organism=Fucus serratus male|type=polypeptide|length=215bp
MPTGLASYLPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDR
PKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPT
PTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP
NQVGRLQKAMYGLMHAGLLWSKKFGGELITKGFERSQTDPCVFRRKHLGK
VVVIIVVYVDDLLVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like