prot_F-serratus_M_contig1075.735.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1075.735.1
Unique Name	prot_F-serratus_M_contig1075.735.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	289

Homology

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BLAST of mRNA_F-serratus_M_contig1075.735.1 vs. uniprot
Match: A0A6H5L5N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N2_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 1.910e-74
Identity = 140/240 (58.33%), Postives = 167/240 (69.58%), Query Frame = 0

Query:   27 IAEGLATALQWYGDSMGEKLASLSREQSVLLAKLEAARETLPCPAVRRTREREP-TQAEDDFEYINSIMVQAPRYTVRVRHLAAQKASLKDRMANLQRRTAGLRESLPVQVQRHEADRMARWRSELTAFQEQREMAFVVSYPGGVAIRSAPSVEAPCMGDVLHGNEA---FWASERLGRLGEDTIYVKLRDGRGWVFENLNGTKVLSRVTPCWMCPSSVETPSDRTPPPAASAVKDVAPG 262
            +AEGLATA Q + D MGEKL SL+++QS LL+KLEA+RE LP  +  RTR+R    +  +D E+I  IM QAP Y  RVR LA QKASL  RM NLQRR+ GLRESLPV +QRH A+R+    S +  F+EQ +MAFV  Y GGVAIR+APS++APC GD+L  NEA   FWASERLGRLGED IYVKLRDGRGWVFE L+G KVL RV       SS+E   D  P  + S+   V  G
Sbjct:    1 MAEGLATAFQCFQDGMGEKLISLAQQQSALLSKLEASREALPVSSTGRTRDRSGRAEYNEDVEFIAKIMSQAPSYAQRVRALAQQKASLDARMVNLQRRSTGLRESLPVPMQRHLAERLEA--SCMAPFREQTDMAFVTCYQGGVAIRTAPSLDAPCAGDILQWNEASGVFWASERLGRLGEDMIYVKLRDGRGWVFETLHGKKVLERVAL-----SSMEDIEDAGPAASGSSSSSVLEG 233

[Close]

BLAST of mRNA_F-serratus_M_contig1075.735.1 vs. uniprot
Match: A0A7S4D8H9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8H9_HETAK)

HSP 1 Score: 72.4 bits (176), Expect = 4.340e-11
Identity = 44/153 (28.76%), Postives = 76/153 (49.67%), Query Frame = 0

Query:   80 PTQAEDDFEYINSIMVQAPRYTVRVRHLAAQKASLKDRMANLQRRTAGLRESLPVQVQRHEADRMARWRSELTAFQEQREMAFVVSYPGGVAIRSAPSVEAPCMGDVLHGNEAFWASERLGRLGEDTIYVKLRDGRGWVFENLNGTKVLSRVT 232
            P   + ++  ++ IM + P Y  ++R +      +   +  L+RR A                +MA+    +  FQE  E  + V++PGGV +RS PS+ A   G +L  +      ER+  +G+DT+Y+++ +G+GWVFE       LSR+T
Sbjct:   84 PLSEDKEYVKVSRIMAKLPAYIEKLRMIRQHGKHINTEVQTLKRRVA----------------QMAKDYRGVDPFQEIGEFFYQVTHPGGVLVRSEPSLAAAPTGTLLPQHTILKVLERVRIIGDDTVYLRIAEGQGWVFEAKKDRVALSRIT 220

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1075.735.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1075.735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L5N2_9PHAE	1.910e-74	58.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S4D8H9_HETAK	4.340e-11	28.76	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 46..66
None	No IPR available	COILS	Coil	Coil	coord: 104..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1075	contig	F-serratus_M_contig1075:168344..175540 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1075.735.1	mRNA_F-serratus_M_contig1075.735.1	Fucus serratus male	mRNA	F-serratus_M_contig1075 164366..176079 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1075.735.1 ID=prot_F-serratus_M_contig1075.735.1|Name=mRNA_F-serratus_M_contig1075.735.1|organism=Fucus serratus male|type=polypeptide|length=289bp
MAGSQASGPARHGSQEEAVEVDSLGPIAEGLATALQWYGDSMGEKLASLS
REQSVLLAKLEAARETLPCPAVRRTREREPTQAEDDFEYINSIMVQAPRY
TVRVRHLAAQKASLKDRMANLQRRTAGLRESLPVQVQRHEADRMARWRSE
LTAFQEQREMAFVVSYPGGVAIRSAPSVEAPCMGDVLHGNEAFWASERLG
RLGEDTIYVKLRDGRGWVFENLNGTKVLSRVTPCWMCPSSVETPSDRTPP
PAASAVKDVAPGTHTEDNRDCVTLNVEDLPPGSTVKKP*