prot_F-serratus_M_contig1075.726.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1075.726.1
Unique Name	prot_F-serratus_M_contig1075.726.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	213

Homology

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BLAST of mRNA_F-serratus_M_contig1075.726.1 vs. uniprot
Match: D7FLT5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT5_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.880e-22
Identity = 72/215 (33.49%), Postives = 118/215 (54.88%), Query Frame = 0

Query:   12 DNWVHED---------FEPESFVRVGDYLSSLER----RGTASTQT--------AAINEENEI--PESNSTNENNRGPWRARALTLALVGIIVLLLGTNAYALNAKLSLEAEKAFLQARVAELSLNRAGEVAKQAPTCSAPVTGNSCP-NEFLDLCFLKMSLGPCATEAFDDPVEHIENALRFAWESTAEVIGAIGKTVAEDFDQLGKEIQSAGT 202
            D+WV  D         F P++FV VG++LSS E     R T+ T +        A+++    +  P +  T+  + G  RA  + L L+ ++V+LLGTNAY+ N   + +AE + L+ +V +L    A   +   PT S   +  +CP ++ +D C+ K+  G CA EA +DPV+ IE+A RFA +S + VIGA+ +T A D  Q+   +++ G+
Sbjct:   19 DSWVPTDASEQQLDDSFHPDTFVNVGNFLSSQESSERARSTSETSSQTPPPATIASVSTVTHVVDPSAPLTSLLSGGS-RAGRIVLGLLAVVVMLLGTNAYSYNQSRAWKAETSSLREKVGKLEA--AARTSASKPTWSTSTSSTTCPGSQLIDTCWFKVGWGDCANEALEDPVKPIEDAFRFALDSASGVIGAVTETFASDMSQVCDAVRAFGS 230

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1075.726.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1075.726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FLT5_ECTSI	1.880e-22	33.49	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 92..212
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 71..91
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..70
None	No IPR available	TMHMM	TMhelix		coord: 71..93

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1075	contig	F-serratus_M_contig1075:62316..67698 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1075.726.1	mRNA_F-serratus_M_contig1075.726.1	Fucus serratus male	mRNA	F-serratus_M_contig1075 62208..68874 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1075.726.1 ID=prot_F-serratus_M_contig1075.726.1|Name=mRNA_F-serratus_M_contig1075.726.1|organism=Fucus serratus male|type=polypeptide|length=213bp
MDSMNLQAESKDNWVHEDFEPESFVRVGDYLSSLERRGTASTQTAAINEE
NEIPESNSTNENNRGPWRARALTLALVGIIVLLLGTNAYALNAKLSLEAE
KAFLQARVAELSLNRAGEVAKQAPTCSAPVTGNSCPNEFLDLCFLKMSLG
PCATEAFDDPVEHIENALRFAWESTAEVIGAIGKTVAEDFDQLGKEIQSA
GTCALNFLGISP*