prot_F-serratus_M_contig107.681.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig107.681.1
Unique Nameprot_F-serratus_M_contig107.681.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length532
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig107.681.1 vs. uniprot
Match: D8LRX6_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX6_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 1.050e-36
Identity = 216/364 (59.34%), Postives = 243/364 (66.76%), Query Frame = 0 
Query:   26 QLVDLHSAAKQDDTVGVVRLLKEGANIDKRDPYGYTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAKDLRGRTVAAVCDMAQYDVDESARERIRKLLESPPPRLNRELGALVAVRPVLPQQLQQQQTPATISATSILDPASDDAXXXXXXXXXXXXXXXXXXXXXXTLADSAVGKHKSSHSVGARAGEANGAAGRRTLSAQYSFGEISGVFALWDNSLATANGGIGGEGSFDGSGGDLDAGGIMEEEWTDSGDAVWNEMWSLLHVPDPDNPDNNLYSEVKTLRKDVKRLRSDVGDSATTAAA 389
            Q VDLHSAAKQDD + VV+LL+EGA IDKRDPYGYTP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++A DLRGRT AAVCDM  YDVD+S ++RI +LL++PP R                 QL+   T +  SA   L       XXXXXXXXXXXXX                                        L+ +      +GVFALWD SL    G             D   GG+++++WTD  DA WNEMW++LHVPDPDNPDNNLYSEVKTLR DVKRLRSD+ ++A+  AA
Sbjct:    7 QFVDLHSAAKQDDIMAVVKLLEEGAPIDKRDPYGYTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVR-----------------QLEAPPTASPASAMLALPXXXXXXXXXXXXXXXXXXXGANPGLQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAVE------NGVFALWDTSLGPGAG-------------DAGPGGMIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAA 334
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig107.681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRX6_ECTSI1.050e-3659.34Chain A, Crystal Structure Of A Designed Full Cons... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 140..154
score: 43.39
coord: 59..74
score: 40.56
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 124..153
e-value: 3.6E-4
score: 29.9
coord: 58..87
e-value: 8.3E-8
score: 41.9
coord: 25..54
e-value: 290.0
score: 9.0
coord: 91..120
e-value: 9.0E-5
score: 31.8
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 125..155
e-value: 1.7E-4
score: 21.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 58..90
score: 14.666
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 91..123
score: 12.663
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 124..156
score: 12.663
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 23..260
e-value: 2.0E-47
score: 163.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 29..164
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 30..121
e-value: 7.1E-19
score: 68.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 30..160
score: 44.033
IPR039323Ankyrin repeat domain-containing protein 60PANTHERPTHR22677FAMILY NOT NAMEDcoord: 63..137
coord: 96..161
coord: 33..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig107contigF-serratus_M_contig107:382676..422896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig107.681.1mRNA_F-serratus_M_contig107.681.1Fucus serratus malemRNAF-serratus_M_contig107 381845..423150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig107.681.1 ID=prot_F-serratus_M_contig107.681.1|Name=mRNA_F-serratus_M_contig107.681.1|organism=Fucus serratus male|type=polypeptide|length=532bp
MKAPDGEELWTNFVGVNTLAGGEAFQLVDLHSAAKQDDTVGVVRLLKEGA
NIDKRDPYGYTPLHWACQKGHTHTVRALLGAGANVHVRDKWRRTPLHRAA
KEGHKETVAALLDSGAEVNAQGDNNWTPLHCSSFHGQVEVVEMLLSHGAD
ESAKDLRGRTVAAVCDMAQYDVDESARERIRKLLESPPPRLNRELGALVA
VRPVLPQQLQQQQTPATISATSILDPASDDAASAKAAATAAAALAAATAS
SATTLADSAVGKHKSSHSVGARAGEANGAAGRRTLSAQYSFGEISGVFAL
WDNSLATANGGIGGEGSFDGSGGDLDAGGIMEEEWTDSGDAVWNEMWSLL
HVPDPDNPDNNLYSEVKTLRKDVKRLRSDVGDSATTAAAAGTGRTGAIPI
SIDGLDGSGGPSALSGSRGEAIGESAGDGGGSGSVPPAKRQKEGVVARRP
LEGFLKPFRHCRGRRWRSPTAPLRVFPGRRIMMSIPRGVEGSSSPQQRQE
QEEQEAMSRKRAALGPGSAGRRSLPGWMQSS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR039323ANKRD60